Pseudomonas fluorescens 411 is a plant pathogen that was isolated from seawater.
plant pathogen Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pseudomonadales |
| Family Pseudomonadaceae |
| Genus Pseudomonas |
| Species Pseudomonas fluorescens |
| Full scientific name Pseudomonas fluorescens Migula 1895 (Approved Lists 1980) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 12636 | PSEUDOMONAS AGAR F (DSMZ Medium 907) | Medium recipe at MediaDive | Name: PSEUDOMONAS AGAR F (DSMZ Medium 907) Composition: Agar 15.0 g/l Glycerol 10.0 g/l Proteose peptone 10.0 g/l Tryptone 10.0 g/l MgSO4 1.5 g/l K2HPO4 1.5 g/l Distilled water | ||
| 12636 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | Medium recipe at MediaDive | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water | ||
| 12636 | TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545) | Medium recipe at MediaDive | Name: TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545) Composition: Casein peptone 17.0 g/l NaCl 5.0 g/l Soy peptone 3.0 g/l D(+)-Glucose 2.5 g/l K2HPO4 2.5 g/l Distilled water | ||
| 12636 | CASO AGAR (MERCK 105458) (DSMZ Medium 220) | Medium recipe at MediaDive | Name: CASO AGAR (MERCK 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water | ||
| 12636 | NUTRIENT AGAR (DSMZ Medium 1) | Medium recipe at MediaDive | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water |
| 12636 | Compoundpigment pink, diffusible |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68369 | 17128 ChEBI | adipate | - | assimilation | from API 20NE |
| 68369 | 29016 ChEBI | arginine | + | hydrolysis | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | + | assimilation | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | fermentation | from API 20NE |
| 68369 | 16899 ChEBI | D-mannitol | + | assimilation | from API 20NE |
| 68369 | 16024 ChEBI | D-mannose | + | assimilation | from API 20NE |
| 68369 | 27689 ChEBI | decanoate | + | assimilation | from API 20NE |
| 68369 | 4853 ChEBI | esculin | - | hydrolysis | from API 20NE |
| 68369 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20NE |
| 68369 | 24265 ChEBI | gluconate | + | assimilation | from API 20NE |
| 68369 | 30849 ChEBI | L-arabinose | + | assimilation | from API 20NE |
| 68369 | 25115 ChEBI | malate | + | assimilation | from API 20NE |
| 68369 | 17306 ChEBI | maltose | - | assimilation | from API 20NE |
| 68369 | 59640 ChEBI | N-acetylglucosamine | + | assimilation | from API 20NE |
| 68369 | 17632 ChEBI | nitrate | + | reduction | from API 20NE |
| 68369 | 27897 ChEBI | tryptophan | - | energy source | from API 20NE |
| 68369 | 16199 ChEBI | urea | - | hydrolysis | from API 20NE |
| 12636 | Sample typeseawater |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Metabolism | Efficient Synthesis of Methyl 3-Acetoxypropionate by a Newly Identified Baeyer-Villiger Monooxygenase. | Liu YY, Li CX, Xu JH, Zheng GW. | Appl Environ Microbiol | 10.1128/aem.00239-19 | 2019 | |
| Metabolism | Characterization of D-Arabitol as Newly Discovered Carbon Source of Bacillus methanolicus. | Lopez MG, Irla M, Brito LF, Wendisch VF. | Front Microbiol | 10.3389/fmicb.2019.01725 | 2019 | |
| Challenges in enzymatic route of mannitol production. | Bhatt SM, Mohan A, Srivastava SK. | ISRN Biotechnol | 10.5402/2013/914187 | 2013 | ||
| Metabolism | Identification of the coumermycin A(1) biosynthetic gene cluster of Streptomyces rishiriensis DSM 40489. | Wang ZX, Li SM, Heide L. | Antimicrob Agents Chemother | 10.1128/aac.44.11.3040-3048.2000 | 2000 | |
| Metabolism | Conversion of 4-hydroxyacetophenone into 4-phenyl acetate by a flavin adenine dinucleotide-containing Baeyer-Villiger-type monooxygenase. | Tanner A, Hopper DJ. | J Bacteriol | 10.1128/jb.182.23.6565-6569.2000 | 2000 | |
| Cloning and characterization of the Type I Baeyer-Villiger monooxygenase from Leptospira biflexa. | Ceccoli RD, Bianchi DA, Fink MJ, Mihovilovic MD, Rial DV. | AMB Express | 10.1186/s13568-017-0390-5 | 2017 | ||
| Metabolism | The mannitol utilization system of the marine bacterium Zobellia galactanivorans. | Groisillier A, Labourel A, Michel G, Tonon T. | Appl Environ Microbiol | 10.1128/aem.02808-14 | 2015 | |
| Enzymology | Use of the tna operon as a new molecular target for Escherichia coli detection. | Bernasconi C, Volponi G, Picozzi C, Foschino R. | Appl Environ Microbiol | 10.1128/aem.00606-07 | 2007 | |
| Metabolism | Enhanced biosurfactant production through cloning of three genes and role of esterase in biosurfactant release. | Sekhon KK, Khanna S, Cameotra SS. | Microb Cell Fact | 10.1186/1475-2859-10-49 | 2011 | |
| Enzymology | Mapping the substrate binding site of phenylacetone monooxygenase from Thermobifida fusca by mutational analysis. | Dudek HM, de Gonzalo G, Pazmino DE, Stepniak P, Wyrwicz LS, Rychlewski L, Fraaije MW. | Appl Environ Microbiol | 10.1128/aem.00687-11 | 2011 | |
| Enzymology | Genetic and biochemical characterization of a novel monoterpene epsilon-lactone hydrolase from Rhodococcus erythropolis DCL14. | van der Vlugt-Bergmans CJ, van der Werf MJ. | Appl Environ Microbiol | 10.1128/aem.67.2.733-741.2001 | 2001 | |
| Enzymology | Purification and characterization of a novel mannitol dehydrogenase from a newly isolated strain of Candida magnoliae. | Lee JK, Koo BS, Kim SY, Hyun HH. | Appl Environ Microbiol | 10.1128/aem.69.8.4438-4447.2003 | 2003 | |
| Enzymology | Cloning of a gene for D-sorbitol dehydrogenase from Gluconobacter oxydans G624 and expression of the gene in Pseudomonas putida IFO3738. | Shibata T, Ichikawa C, Matsuura M, Takata Y, Noguchi Y, Saito Y, Yamashita M | J Biosci Bioeng | 10.1016/s1389-1723(00)89097-0 | 2000 | |
| Enzymology | 3'-UTR engineering to improve soluble expression and fine-tuning of activity of cascade enzymes in Escherichia coli. | Song JW, Woo JM, Jung GY, Bornscheuer UT, Park JB | Sci Rep | 10.1038/srep29406 | 2016 | |
| Metabolism | Functional Characterization of the Mannitol Promoter of Pseudomonas fluorescens DSM 50106 and Its Application for a Mannitol-Inducible Expression System for Pseudomonas putida KT2440. | Hoffmann J, Altenbuchner J | PLoS One | 10.1371/journal.pone.0133248 | 2015 | |
| Enzymology | Isomalt production by cloning, purifying and expressing of the MDH gene from Pseudomonas fluorescens DSM 50106 in different strains of E. coli. | Haghighatian M, Mofid MR, Nekouei MK, Yaghmaei P, Tafreshi AH | Pak J Biol Sci | 10.3923/pjbs.2008.2001.2006 | 2008 | |
| Metabolism | Directed evolution of a Baeyer-Villiger monooxygenase to enhance enantioselectivity. | Kirschner A, Bornscheuer UT | Appl Microbiol Biotechnol | 10.1007/s00253-008-1646-4 | 2008 | |
| Enzymology | Design of a secondary alcohol degradation pathway from Pseudomonas fluorescens DSM 50106 in an engineered Escherichia coli. | Kirschner A, Altenbuchner J, Bornscheuer UT | Appl Microbiol Biotechnol | 10.1007/s00253-007-0902-3 | 2007 | |
| Enzymology | Cloning, expression, and characterization of a Baeyer-Villiger monooxygenase from Pseudomonas fluorescens DSM 50106 in E. coli. | Kirschner A, Altenbuchner J, Bornscheuer UT | Appl Microbiol Biotechnol | 10.1007/s00253-006-0556-6 | 2006 | |
| Enzymology | Cloning, functional expression and biochemical characterization of a stereoselective alcohol dehydrogenase from Pseudomonas fluorescens DSM50106. | Hildebrandt P, Musidlowska A, Bornscheuer UT, Altenbuchner J | Appl Microbiol Biotechnol | 10.1007/s00253-002-1036-2 | 2002 | |
| Enzymology | Screening, nucleotide sequence, and biochemical characterization of an esterase from Pseudomonas fluorescens with high activity towards lactones. | Khalameyzer V, Fischer I, Bornscheuer UT, Altenbuchner J | Appl Environ Microbiol | 10.1128/AEM.65.2.477-482.1999 | 1999 | |
| Metabolism | The mannitol utilization genes of Pseudomonas fluorescens are regulated by an activator: cloning, nucleotide sequence and expression of the mtlR gene. | Brunker P, Hils M, Altenbuchner J, Mattes R | Gene | 10.1016/s0378-1119(98)00274-1 | 1998 | |
| Metabolism | Structure and function of the genes involved in mannitol, arabitol and glucitol utilization from Pseudomonas fluorescens DSM50106. | Brunker P, Altenbuchner J, Mattes R | Gene | 10.1016/s0378-1119(97)00574-x | 1998 | |
| Enzymology | Cloning, nucleotide sequence and expression of a mannitol dehydrogenase gene from Pseudomonas fluorescens DSM 50106 in Escherichia coli. | Brunker P, Altenbuchner J, Kulbe KD, Mattes R | Biochim Biophys Acta | 10.1016/s0167-4781(96)00189-3 | 1997 |
| #12636 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 50106 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #68369 | Automatically annotated from API 20NE . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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