Name: Sphingomonas sp. JCM 17541
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 162035

Type strain:

Species: Sphingomonas sp.

Culture col. no.: JCM 17541, KCTC 23327

Strain history: C. N. Seong 01SU4-P.

NCBI tax ID(s): 28214 (species)

Special Collections

JCM
KCTC

Other strains from Sphingomonas sp.

Section

Sphingomonas sp. JCM 17541 is a bacterium that was isolated from Fresh water from Woopo.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Sphingomonadales*
	Family	*Sphingomonadaceae*
	Genus	*Sphingomonas*
	Full Scientific Name (LPSN)	Sphingomonas Yabuuchi et al. 1990

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	25 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Fresh water from Woopo
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence HQ436496 (>99% sequence identity) for Sphingomonas lacunae subclade from Microbeatlas

Aquatic Samples	1450
Soil Samples	60
Animal Samples	77
Plant Samples	84
Total Samples	1671

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Sphingomonas sp. enrichment culture clone 01SU4-P 16S ribosomal RNA gene, partial sequence	HQ436496	1415	GenBank ENA	940132 tax ID

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 17541, KCTC 23327

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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