Sphingomonas sp. (KCTC 23327, JCM 17541)

Name: Sphingomonas sp. (KCTC 23327, JCM 17541)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 162035

Type strain

Culture col. no. KCTC 23327 JCM 17541

NCBI tax ID(s) 28214

Special Collections JCM KCTC

History JCM <-- C. N. Seong 01SU4-P.

Links

JCM 17541 is a bacterium that was isolated from Fresh water from Woopo.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 131665

JCM 17541

@ref 20215

Last LPSN update 2026-05-29 08:44:50

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Sphingomonadales

Family Sphingomonadaceae

Genus Sphingomonas

Full scientific name Sphingomonas Yabuuchi et al. 1990

Synonyms (18)

Alterirhizorhabdus
Paraquisediminimonas
Novistakelama
Parastakelama
Alteristakelama
Pseudostakelama
Alterisphingomonas
Solisphingomonas
Parayabuuchia
Humisphingomonas
Pseudosphingomonas
Neorhizorhabdus
Parasphingomonas
Flavisphingomonas
Edaphosphingomonas
Pararhizorhabdus
Alteriyabuuchia
Alterisphingopyxis

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	25

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
67770	Fresh water from Woopo	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence HQ436496 (>99% sequence identity) for Sphingomonas lacunae subclade from Microbeatlas

Aquatic Samples	1450
Soil Samples	60
Animal Samples	77
Plant Samples	84
Total Samples	1671

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Sphingomonas sp. enrichment culture clone 01SU4-P 16S ribosomal RNA gene, partial sequence	HQ436496	1415		940132

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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