Name: Sphingomonas sp. JCM 10459
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 160958

Type strain:

Species: Sphingomonas sp.

Culture col. no.: JCM 10459

Strain history: Y. Doi KT-1.

NCBI tax ID(s): 28214 (species)

SI-ID 111477

JCM 10459

Special Collections

Other strains from Sphingomonas sp.

Section

Sphingomonas sp. JCM 10459 is a bacterium that was isolated from Water of the Arakawa River.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Sphingomonadales*
	Family	*Sphingomonadaceae*
	Genus	*Sphingomonas*
	Full Scientific Name (LPSN)	Sphingomonas Yabuuchi et al. 1990

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: Q-10

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Water of the Arakawa River
[Ref.: #67770]	Geographic location (country and/or sea, region)	Saitama Pref.
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Sphingomonas sp. KT-1 gene for 16S ribosomal RNA, partial sequence	AB022601	1459	GenBank ENA	88363 tax ID

[Ref.: #67770]

GC-content

63 mol%

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 10459

[Ref.: #113122]

SI-ID 111477

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Biochemical and molecular characterization of poly(aspartic acid) hydrolase-2 from sphingomonas sp. KT-1.	Hiraishi T, Kajiyama M, Tabata K, Abe H, Yamato I, Doi Y	Biomacromolecules	10.1021/bm034085i	2003	*
Enzymology	Purification and characterization of poly(aspartic acid) hydrolase from Sphingomonas sp. KT-1.	Tabata K, Kajiyama M, Hiraishi T, Abe H, Yamato I, Doi Y	Biomacromolecules	10.1021/bm0155468	2001	*
Metabolism	Microbial degradation of poly(aspartic acid) by two isolated strains of Pedobacter sp. and Sphingomonas sp.	Tabata K, Abe H, Doi Y	Biomacromolecules	10.1021/bm9900038	2000	*
Metabolism	Poly(aspartic acid) degradation by a Sphingomonas sp. isolated from freshwater.	Tabata K, Kasuya KI, Abe H, Masuda K, Doi Y	Appl Environ Microbiol	10.1128/AEM.65.9.4268-4270.1999	1999	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#113122

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID111477.1 )

* These data were automatically processed and therefore are not curated

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