Name: Sphingomonas aeria JCM 19859
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 162636

Type strain:

Species: Sphingomonas aeria

Culture col. no.: JCM 19859, KCTC 42061

Strain history: S. B. Kim R 1-3.

NCBI tax ID(s): 28214 (species)

Special Collections

JCM
KCTC

Other strains from Sphingomonas aeria

Section

Sphingomonas aeria JCM 19859 is a bacterium that was isolated from Indoor air in a pharmaceutical process environment located in Daejeon.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Sphingomonadales*
	Family	*Sphingomonadaceae*
	Genus	*Sphingomonas*
	Species	"Sphingomonas aeria"
	Full Scientific Name (LPSN)	Sphingomonas aeria Park et al. 2015

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: Q-10

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Indoor air in a pharmaceutical process environment located in Daejeon
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence KJ572399 (>99% sequence identity) for Sphingomonas from Microbeatlas

Aquatic Samples	178
Soil Samples	7
Animal Samples	513
Plant Samples	34
Total Samples	732

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	'Sphingomonas aeria' Park et al. 2015 non Xue et al. 2018 strain R1-3 16S ribosomal RNA gene, partial sequence	KJ572399	1374	GenBank ENA	1500313 tax ID

[Ref.: #67770]

GC-content

67.2 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 19859, KCTC 42061

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Sphingomonas aeria sp. nov. from indoor air of a pharmaceutical environment.	Park HK, Han JH, Kim TS, Joung Y, Cho SH, Kwon SW, Kim SB	Antonie Van Leeuwenhoek	10.1007/s10482-014-0302-5	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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