General

@ref: 67770

BacDive-ID: 162636

keywords: 16S sequence, Bacteria, mesophilic

description: Sphingomonas aeria JCM 19859 is a mesophilic bacterium that was isolated from Indoor air in a pharmaceutical process environment located in Daejeon.

NCBI tax id

• NCBI tax id: 28214
• Matching level: species

strain history

• @ref: 67770
• history: S. B. Kim R 1-3.

doi: 10.13145/bacdive162636.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/pseudomonadota
• domain: Bacteria
• phylum: Pseudomonadota
• class: Alphaproteobacteria
• order: Sphingomonadales
• family: Sphingomonadaceae
• genus: Sphingomonas
• species: Sphingomonas aeria
• full scientific name: Sphingomonas aeria Park et al. 2015

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Sphingomonadales

family: Sphingomonadaceae

genus: Sphingomonas

species: Sphingomonas sp.

full scientific name: Sphingomonas sp.

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 30
• range: mesophilic

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: Q-10

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Indoor air in a pharmaceutical process environment located in Daejeon
• country: Republic of Korea
• origin.country: KOR
• continent: Asia

taxonmaps

• @ref: 69479
• File name: preview.99_38643.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_20;96_761;97_956;98_1667;99_38643&stattab=map
• Last taxonomy: Sphingomonas
• 16S sequence: KJ572399
• Sequence Identity:
• Total samples: 732
• soil counts: 7
• aquatic counts: 178
• animal counts: 513
• plant counts: 34

Sequence information

16S sequences

• @ref: 67770
• description: Sphingomonas aeria strain R1-3 16S ribosomal RNA gene, partial sequence
• accession: KJ572399
• length: 1374
• database: ena
• NCBI tax ID: 1500313

GC content

• @ref: 67770
• GC-content: 67.2
• method: thermal denaturation, midpoint method (Tm)

External links

@ref: 67770

culture collection no.: JCM 19859, KCTC 42061

literature

• topic: Phylogeny
• Pubmed-ID: 25318449
• title: Sphingomonas aeria sp. nov. from indoor air of a pharmaceutical environment.
• authors: Park HK, Han JH, Kim TS, Joung Y, Cho SH, Kwon SW, Kim SB
• journal: Antonie Van Leeuwenhoek
• DOI: 10.1007/s10482-014-0302-5
• year: 2014
• mesh: Aerobiosis, *Air Microbiology, Anti-Bacterial Agents/pharmacology, Bacterial Typing Techniques, Base Composition, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Drug Industry, Fatty Acids/analysis, Locomotion, Microbial Sensitivity Tests, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sodium Chloride/metabolism, Spermidine/analysis, Sphingomonas/*classification/genetics/*isolation & purification/physiology, Temperature
• topic2: Genetics

Reference