Name: Sphingomonas arantia JCM 19855
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 162635

Type strain:

Species: Sphingomonas arantia

Culture col. no.: JCM 19855, CGMCC 1.12702

Strain history: J. Lv 6P.

NCBI tax ID(s): 1460676 (species)

Special Collections

Section

When using BacDive for research please cite our paper

Sphingomonas arantia JCM 19855 is a mesophilic bacterium that was isolated from Soil in the permafrost region of Hoh Xil basin.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Sphingomonadales*
	Family	*Sphingomonadaceae*
	Genus	*Sphingomonas*
	Species	**Sphingomonas arantia**
	Full Scientific Name (LPSN)	Sphingomonas arantia Jia et al. 2016

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	25 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: Q-10

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil in the permafrost region of Hoh Xil basin
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence KF876174 (>99% sequence identity) for Sphingomonas from Microbeatlas

Aquatic Samples	81
Soil Samples	62
Animal Samples	48
Plant Samples	164
Total Samples	355

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Sphingomonas arantia strain 6P 16S ribosomal RNA gene, partial sequence	KF876174	1453	GenBank ENA	1460676 tax ID

[Ref.: #67770]

GC-content

65.3 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 19855, CGMCC 1.12702

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Sphingomonas arantia sp. nov., isolated from Hoh Xil basin, China.	Jia L, Zheng Z, Feng X, Nogi Y, Yang A, Zhang Y, Han L, Lu Z, Lv J	Antonie Van Leeuwenhoek	10.1007/s10482-015-0586-0	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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