Cite this strain

Sphingomonas sp. (CCUG 34124)

Name: Sphingomonas sp. (CCUG 34124)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 147740

Type strain

Culture col. no. CCUG 34124

NCBI tax ID(s) 28214

Special Collections CCUG

Links

CCUG 34124 is a bacterium that was isolated from Human wound,post op.,Hoffman instrument.

Bacteria

Name and taxonomic classification

SI-ID 57066

CCUG 34124

@ref 20215

Last LPSN update 2026-05-29 08:41:30

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Sphingomonadales

Family Sphingomonadaceae

Genus Sphingomonas

Full scientific name Sphingomonas Yabuuchi et al. 1990

Synonyms (18)

Alterirhizorhabdus
Paraquisediminimonas
Novistakelama
Parastakelama
Alteristakelama
Pseudostakelama
Alterisphingomonas
Solisphingomonas
Parayabuuchia
Humisphingomonas
Pseudosphingomonas
Neorhizorhabdus
Parasphingomonas
Flavisphingomonas
Edaphosphingomonas
Pararhizorhabdus
Alteriyabuuchia
Alterisphingopyxis

Morphology

Culture and growth conditions

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	+	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
68369	4853 ChEBI	esculin	+	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	-	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68369	beta-glucosidase	+	3.2.1.21	from API 20NE
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68369	gelatinase	-		from API 20NE
68369	urease	-	3.5.1.5	from API 20NE

Fatty acid profile

Metadata FA analysis

@ref

51945

Fatty acid	Percentage	ECL
C18:1 ω7c /12t/9t	46.3	17.824
C16:1 ω7c	22.3	15.819
C16:1 ω5c	8.6	15.908
C16:0	6.2	16
C14:0 2OH	5.7	15.205
C18:1 ω5c	3.6	17.919
Unidentified	3	18.069
C17:1 ω6c	2.9	16.862
C18:2 ω6,9c/C18:0 ANTE	0.5	17.724
C14:0	0.5	14
C18:1 2OH	0.3	19.088

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
51945	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body-Site	#Other	#Wound
#Infection	#Patient	-

Isolation

@ref	Sample type	Host species	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
51945	Human wound,post op.,Hoffman instrument	Homo sapiens	1995-03-01	Uppsala	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#51945	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 34124
#68369	Automatically annotated from API 20NE .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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