Enterococcus gallinarum (DSM 24841, ATCC 49573, JCM 8728)

Name: Enterococcus gallinarum (DSM 24841, ATCC 49573, JCM 8728)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 5314

Type strain

Strain Designation F87/276, PB21

Culture col. no. DSM 24841 ATCC 49573 JCM 8728 CCUG 18658 NCTC 12359 16 more

NCBI tax ID(s) 1218091 1353

Special Collections DSMZ CCUG JCM CIP

History DSMZ <- JCM <- ATCC <- NCDO <- D. Jones; F87/276 <- E. M. Barnes; F87/276 JCM <-- ATCC 49573 <-- NCDO 2313 <-- D. Jones F87/276. CIP <- 1987, NCFB <- 1981, D. Jones

Links

Enterococcus gallinarum F87/276 is a microaerophile, Gram-positive, coccus-shaped human pathogen that was isolated from chicken intestine.

Gram-positive coccus-shaped microaerophile human pathogen genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 6584

LMG 13129,ATCC 49573,CCUG 18658,CIP 103013,JCM 8728,NCFB 2313,DSM 24841,NCDO 2313,NCTC 12359,NCIMB 702313,CCM 4054,CECT970,NBRC 100675,BCRC 15477,CCRC 15477,CNCTC 5772,CGMCC 1.2517

@ref 20215

Last LPSN update 2026-05-29 08:26:08

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Enterococcaceae

Genus Enterococcus

Species Enterococcus gallinarum

Full scientific name Enterococcus gallinarum (Bridge and Sneath 1982) Collins et al. 1984

Synonyms (1)

Streptococcus gallinarum

BacDive ID	Other strains from **Enterococcus gallinarum** (52)	Type strain
130944	E. gallinarum JM-20, DSM 28564
130945	E. gallinarum 30-31, A-C2-Ob, DSM 28565
5310	E. gallinarum F87/268, PB21, DSM 20628, ATCC 35038, NCTC ...
5311	E. gallinarum F87/277, PB24 (oder PB22), PB24 (oder PB22?), ...
5312	E. gallinarum F87/279, PB24, DSM 20718, NCDO 2315
5313	E. gallinarum DSM 25780, NCCP 11518
130946	E. gallinarum JJM0609-2-2, DSM 100110
136387	E. gallinarum D 417, CIP 105160
136575	E. gallinarum UW 701/95, BA 4174, CIP 106999
136635	E. gallinarum 2628-95, CIP 107208
137163	E. gallinarum PB18, LRA 086 10 84, CIP 103692, ATCC 49608, ...
139129	E. gallinarum BM4174, CIP 105985
142326	E. gallinarum CCUG 11665, LMG 8145
145500	E. gallinarum CCUG 28691
145503	E. gallinarum CCUG 28694
145504	E. gallinarum CCUG 28695
145505	E. gallinarum CCUG 28696, LMG 16201
145865	E. gallinarum CCUG 29831, LMG 16202
147081	E. gallinarum CCUG 32818, LMG 14739
147927	E. gallinarum CCUG 34517, LMG 16204
148173	E. gallinarum CCUG 34969
148419	E. gallinarum CCUG 35405
149137	E. gallinarum CCUG 36919 A
149232	E. gallinarum CCUG 37309
149980	E. gallinarum CCUG 38788
151308	E. gallinarum CCUG 43708
151591	E. gallinarum CCUG 44397
151744	E. gallinarum CCUG 44771
152029	E. gallinarum CCUG 45595
152099	E. gallinarum CCUG 45754
152181	E. gallinarum CCUG 45987
152401	E. gallinarum CCUG 46676
152468	E. gallinarum CCUG 46869
152575	E. gallinarum CCUG 47108
152783	E. gallinarum CCUG 47607
152795	E. gallinarum CCUG 47634
152811	E. gallinarum CCUG 47668
152996	E. gallinarum CCUG 48209
153335	E. gallinarum CCUG 49260
153459	E. gallinarum CCUG 49667
153532	E. gallinarum CCUG 50087
153931	E. gallinarum CCUG 51680
154033	E. gallinarum CCUG 52059
154576	E. gallinarum CCUG 54456
155363	E. gallinarum CCUG 57467
155735	E. gallinarum CCUG 59166
155748	E. gallinarum CCUG 59199
155749	E. gallinarum CCUG 59200
158937	E. gallinarum BL-249-WT-6, DSM 104116
160037	E. gallinarum Cla-CZ-15, DSM 109011
169222	E. gallinarum 0090-6-DD-A, S500, DSM 106191
169223	E. gallinarum Cla-AP-1, DSM 111134

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
119515	positive	coccus-shaped

Colony morphology

@ref	Type of hemolysis	Hemolysis ability	Incubation period
17785	alpha	1	1-2 days
119515		1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
17785	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
17785	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
119515	CIP Medium 6	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
17785	positive	growth	37
67770	positive	growth	37
119515	positive	growth	25-41
119515	negative	growth	10
119515	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
17785	microaerophile
125439	facultative anaerobe	95.273
119515	facultative anaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
119515	NaCl	positive	growth	6.5 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68381	40585 ChEBI	alpha-cyclodextrin	+	builds acid from	from API rID32STR
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68381	29016 ChEBI	arginine	+	hydrolysis	from API rID32STR
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	-	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	-	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68381	16899 ChEBI	D-mannitol	+	builds acid from	from API rID32STR
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	-	builds acid from	from API 50CH acid
68381	16988 ChEBI	D-ribose	+	builds acid from	from API rID32STR
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68381	16443 ChEBI	D-tagatose	+	builds acid from	from API rID32STR
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
119515	4853 ChEBI	esculin	+	hydrolysis
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68381	28087 ChEBI	glycogen	-	builds acid from	from API rID32STR
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68381	606565 ChEBI	hippurate	+	hydrolysis	from API rID32STR
119515	606565 ChEBI	hippurate	+	hydrolysis
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68381	30849 ChEBI	L-arabinose	+	builds acid from	from API rID32STR
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68381	17716 ChEBI	lactose	+	builds acid from	from API rID32STR
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68381	17306 ChEBI	maltose	+	builds acid from	from API rID32STR
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
68381	6731 ChEBI	melezitose	-	builds acid from	from API rID32STR
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68381	28053 ChEBI	melibiose	+	builds acid from	from API rID32STR
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68381	320055 ChEBI	methyl beta-D-glucopyranoside	+	builds acid from	from API rID32STR
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
119515	17632 ChEBI	nitrate	-	reduction
119515	16301 ChEBI	nitrite	-	reduction
68371	0 ChEBI	Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371	0 ChEBI	Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68381	27941 ChEBI	pullulan	-	builds acid from	from API rID32STR
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68381	16634 ChEBI	raffinose	+	builds acid from	from API rID32STR
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68381	30911 ChEBI	sorbitol	-	builds acid from	from API rID32STR
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68381	17992 ChEBI	sucrose	+	builds acid from	from API rID32STR
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68381	27082 ChEBI	trehalose	+	builds acid from	from API rID32STR
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68381	16199 ChEBI	urea	-	hydrolysis	from API rID32STR
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68381	15688 ChEBI	acetoin		from API rID32STR

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
68381	15688 ChEBI	acetoin	+	from API rID32STR
119515	15688 ChEBI	acetoin	-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68381	Alanyl-Phenylalanyl-Proline arylamidase	-		from API rID32STR
119515	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68381	alpha-galactosidase	+	3.2.1.22	from API rID32STR
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68381	arginine dihydrolase	+	3.5.3.6	from API rID32STR
68382	beta-galactosidase	+	3.2.1.23	from API zym
119515	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	+	3.2.1.21	from API zym
68381	beta-glucosidase	+	3.2.1.21	from API rID32STR
68382	beta-glucuronidase	+	3.2.1.31	from API zym
68381	beta-glucuronidase	+	3.2.1.31	from API rID32STR
68381	beta-mannosidase	+	3.2.1.25	from API rID32STR
17785	catalase	+	1.11.1.6
119515	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
17785	cytochrome-c oxidase	-	1.9.3.1
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
119515	gamma-glutamyltransferase	-	2.3.2.2
68381	glycyl tryptophan arylamidase	+		from API rID32STR
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
119515	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
119515	ornithine decarboxylase	-	4.1.1.17
119515	oxidase	-
68381	pyrrolidonyl arylamidase	+	3.4.19.3	from API rID32STR
68382	trypsin	-	3.4.21.4	from API zym
68381	urease	-	3.5.1.5	from API rID32STR
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
119515	-	-	+	+	-	+	-	-	-	+	+	+	+	+	+	-	+	+	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
119515	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
17785	+	+	+	+	+	+/-	+	+	-	+	+	+	+	+	-	+	+	-	+	+	+	+	+	-	-	+	+	-	+	+	+	-
17785	+	+	+	+	+	-	+	+	-	+	+	+	+	+	-	+	+	-	-	+	-	+	+	-	-	+	+	-	+	+	+	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
119515	not determinedn.d.	+	+	+	+	+	-	-	+	+	+	+	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Birds	#Chicken
#Host Body-Site	#Gastrointestinal tract	#Large intestine

Isolation

@ref	Sample type
17785	chicken intestine
46855	Chick,intestine of young animal
67770	Chicken intestine
119515	Animal, Chicken, intestine

Taxonmaps

69479

Global distribution of 16S sequence LC097066 (>99% sequence identity) for Enterococcus from Microbeatlas

Aquatic Samples	1598
Soil Samples	573
Animal Samples	15794
Plant Samples	896
Total Samples	18861

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Pathogenicity animal	Biosafety level	Biosafety level comment
17785			2	Risk group (German classification) According to TRBA 466
119515			2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	43071_G02 assembly for Enterococcus gallinarum NCTC12359	contig	GCA_900447935	1353.41	8032412572	1353	68.22
66792	ASM154427v1 assembly for Enterococcus gallinarum NBRC 100675	contig	GCA_001544275	1218091.3	2731957567	1218091	54.64
66792	ASM188615v1 assembly for Enterococcus gallinarum DSM 24841	scaffold	GCA_001886155	1353.11		1353	41.22
124043	ASM4268422v1 assembly for Enterococcus gallinarum JCM 8728	scaffold	GCA_042684225			1353	38.82

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Enterococcus gallinarum strain ATCC 49573 16S ribosomal RNA gene, partial sequence	KC510236	814	1353
17785	Enterococcus gallinarum 16S ribosomal RNA gene, partial sequence	AF039900	1506	1353
67770	Enterococcus gallinarum 16S rRNA gene, strain LMG 13129	AJ301833	1568	1353
67770	Enterococcus gallinarum 16S rRNA gene, strain CECT970T	AJ420805	1516	1353
67770	Enterococcus gallinarum gene for 16S ribosomal RNA, partial sequence, strain: JCM 8728	LC097066	1498	1353
124043	Enterococcus gallinarum gene for 16S rRNA, partial sequence, strain: NBRC 100675.	AB681218	1484	1353
124043	E.gallinarum 16S rRNA gene, partial (strain CCUG 18658)	Y12910	366	1353
124043	Enterococcus gallinarum strain LMG 13129 16S ribosomal RNA gene, partial sequence.	MH117954	749	1353

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: 43071_G02 assembly for Enterococcus gallinarum NCTC12359
BV-BRC: 1353.41

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	95.27	no
125439	gram_stain	BacteriaNetⓘ	positive	57.00	no
125439	motility	BacteriaNetⓘ	yes	65.42	no
125439	spore_formation	BacteriaNetⓘ	yes	57.50	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Enterococcus gallinarum NBRC 100675
PATRIC: 1218091.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	84.98	no
125438	anaerobic	anaerobicⓘ	no	88.60	yes
125438	spore-forming	spore-formingⓘ	no	69.26	no
125438	aerobic	aerobicⓘ	no	94.29	yes
125438	thermophilic	thermophileⓘ	no	94.07	yes
125438	flagellated	motile2+ⓘ	yes	60.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Pretransplant Gut Colonization with Intrinsically Vancomycin-Resistant Enterococci (E. gallinarum and E. casseliflavus) and Outcomes of Allogeneic Hematopoietic Cell Transplantation.	Rashidi A, Ebadi M, Shields-Cutler RR, DeFor TE, Al-Ghalith GA, Ferrieri P, Young JH, Dunny GM, Knights D, Weisdorf DJ.	Biol Blood Marrow Transplant	10.1016/j.bbmt.2018.01.025	2018
Metabolism	Unravelling the Reduction Pathway as an Alternative Metabolic Route to Hydroxycinnamate Decarboxylation in Lactobacillus plantarum.	Santamaria L, Reveron I, Lopez de Felipe F, de Las Rivas B, Munoz R.	Appl Environ Microbiol	10.1128/aem.01123-18	2018
Metabolism	Ethylphenol Formation by Lactobacillus plantarum: Identification of the Enzyme Involved in the Reduction of Vinylphenols.	Santamaria L, Reveron I, de Felipe FL, de Las Rivas B, Munoz R.	Appl Environ Microbiol	10.1128/aem.01064-18	2018
	Bifidobacteria support optimal infant vaccine responses.	Ryan FJ, Clarke M, Lynn MA, Benson SC, McAlister S, Giles LC, Choo JM, Rossouw C, Ng YY, Semchenko EA, Richard A, Leong LEX, Taylor SL, Blake SJ, Mugabushaka JI, Walker M, Wesselingh SL, Licciardi PV, Seib KL, Tumes DJ, Richmond P, Rogers GB, Marshall HS, Lynn DJ.	Nature	10.1038/s41586-025-08796-4	2025
	Antibacterial Potential of Extracts and Phytoconstituents Isolated from Syncarpia hillii Leaves In Vitro.	Perera MMN, Dighe SN, Katavic PL, Collet TA.	Plants (Basel)	10.3390/plants11030283	2022
Pathogenicity	Antimicrobial resistance profiles of vancomycin-resistant Enterococcus species isolated from laboratory mice.	Yamanaka H, Kadomatsu R, Takagi T, Ohsawa M, Yamamoto N, Kubo N, Takemoto T, Ohsawa K.	J Vet Sci	10.4142/jvs.2019.20.e13	2019
Pathogenicity	Antimicrobial susceptibility of enterococcal species isolated from antibiotic-treated dogs and cats.	Kataoka Y, Umino Y, Ochi H, Harada K, Sawada T.	J Vet Med Sci	10.1292/jvms.13-0576	2014
	Development of a Colloidal Gold-Based Immunochromatographic Strip for Rapid Detection of Klebsiella pneumoniae Serotypes K1 and K2.	Siu LK, Tsai YK, Lin JC, Chen TL, Fung CP, Chang FY.	J Clin Microbiol	10.1128/jcm.01608-16	2016
Phylogeny	A 16S rRNA Gene and Draft Genome Database for the Murine Oral Bacterial Community.	Joseph S, Aduse-Opoku J, Hashim A, Hanski E, Streich R, Knowles SCL, Pedersen AB, Wade WG, Curtis MA.	mSystems	10.1128/msystems.01222-20	2021
Phylogeny	Identification of clinically relevant enterococcus species by direct sequencing of groES and spacer region.	Tsai JC, Hsueh PR, Lin HM, Chang HJ, Ho SW, Teng LJ.	J Clin Microbiol	10.1128/jcm.43.1.235-241.2005	2005
Pathogenicity	Detection and differentiation of vanC-1, vanC-2, and vanC-3 glycopeptide resistance genes in enterococci.	Clark NC, Teixeira LM, Facklam RR, Tenover FC.	J Clin Microbiol	10.1128/jcm.36.8.2294-2297.1998	1998
Phylogeny	Use of tests for acidification of methyl-alpha-D-glucopyranoside and susceptibility to efrotomycin for differentiation of strains of Enterococcus and some related genera.	Carvalho MG, Teixeira LM, Facklam RR.	J Clin Microbiol	10.1128/jcm.36.6.1584-1587.1998	1998
Phylogeny	Sequencing the gene encoding manganese-dependent superoxide dismutase for rapid species identification of enterococci.	Poyart C, Quesnes G, Trieu-Cuot P.	J Clin Microbiol	10.1128/jcm.38.1.415-418.2000	2000
Phylogeny	Species identification of enterococci via intergenic ribosomal PCR.	Tyrrell GJ, Bethune RN, Willey B, Low DE.	J Clin Microbiol	10.1128/jcm.35.5.1054-1060.1997	1997
Phylogeny	Development of a PCR assay for identification of staphylococci at genus and species levels.	Martineau F, Picard FJ, Ke D, Paradis S, Roy PH, Ouellette M, Bergeron MG.	J Clin Microbiol	10.1128/jcm.39.7.2541-2547.2001	2001
Phylogeny	Identification of Enterococcus species and phenotypically similar Lactococcus and Vagococcus species by reverse checkerboard hybridization to chaperonin 60 gene sequences.	Goh SH, Facklam RR, Chang M, Hill JE, Tyrrell GJ, Burns EC, Chan D, He C, Rahim T, Shaw C, Hemmingsen SM.	J Clin Microbiol	10.1128/jcm.38.11.3953-3959.2000	2000
Phylogeny	Identification of clinically relevant viridans streptococci by an oligonucleotide array.	Chen CC, Teng LJ, Kaiung S, Chang TC.	J Clin Microbiol	10.1128/jcm.43.4.1515-1521.2005	2005
Phylogeny	New quadriplex PCR assay for detection of methicillin and mupirocin resistance and simultaneous discrimination of Staphylococcus aureus from coagulase-negative staphylococci.	Zhang K, Sparling J, Chow BL, Elsayed S, Hussain Z, Church DL, Gregson DB, Louie T, Conly JM.	J Clin Microbiol	10.1128/jcm.42.11.4947-4955.2004	2004
	Development of a PCR assay for rapid detection of enterococci.	Ke D, Picard FJ, Martineau F, Menard C, Roy PH, Ouellette M, Bergeron MG.	J Clin Microbiol	10.1128/jcm.37.11.3497-3503.1999	1999
	Evidence for horizontal gene transfer in evolution of elongation factor Tu in enterococci.	Ke D, Boissinot M, Huletsky A, Picard FJ, Frenette J, Ouellette M, Roy PH, Bergeron MG.	J Bacteriol	10.1128/jb.182.24.6913-6920.2000	2000
Enzymology	Development of a rapid PCR assay specific for Staphylococcus saprophyticus and application to direct detection from urine samples.	Martineau F, Picard FJ, Menard C, Roy PH, Ouellette M, Bergeron MG.	J Clin Microbiol	10.1128/jcm.38.9.3280-3284.2000	2000
Phylogeny	Staph ID/R: a rapid method for determining staphylococcus species identity and detecting the mecA gene directly from positive blood culture.	Pasko C, Hicke B, Dunn J, Jaeckel H, Nieuwlandt D, Weed D, Woodruff E, Zheng X, Jenison R.	J Clin Microbiol	10.1128/jcm.05534-11	2012
Phylogeny	Development of quantitative PCR assays targeting the 16S rRNA genes of Enterococcus spp. and their application to the identification of enterococcus species in environmental samples.	Ryu H, Henson M, Elk M, Toledo-Hernandez C, Griffith J, Blackwood D, Noble R, Gourmelon M, Glassmeyer S, Santo Domingo JW.	Appl Environ Microbiol	10.1128/aem.02802-12	2013
Pathogenicity	New real-time PCR assay for rapid detection of methicillin-resistant Staphylococcus aureus directly from specimens containing a mixture of staphylococci.	Huletsky A, Giroux R, Rossbach V, Gagnon M, Vaillancourt M, Bernier M, Gagnon F, Truchon K, Bastien M, Picard FJ, van Belkum A, Ouellette M, Roy PH, Bergeron MG.	J Clin Microbiol	10.1128/jcm.42.5.1875-1884.2004	2004
Enzymology	Rapid ultrafiltration concentration and biosensor detection of enterococci from large volumes of Florida recreational water.	Leskinen SD, Lim DV.	Appl Environ Microbiol	10.1128/aem.00052-08	2008
	Development of a swine-specific fecal pollution marker based on host differences in methanogen mcrA genes.	Ufnar JA, Ufnar DF, Wang SY, Ellender RD.	Appl Environ Microbiol	10.1128/aem.00319-07	2007
Phylogeny	Identification and characterization of a novel Enterococcus bacteriophage with potential to ameliorate murine colitis.	Nishio J, Negishi H, Yasui-Kato M, Miki S, Miyanaga K, Aoki K, Mizusawa T, Ueno M, Ainai A, Muratani M, Hangai S, Yanai H, Hasegawa H, Ishii Y, Tanji Y, Taniguchi T.	Sci Rep	10.1038/s41598-021-99602-4	2021
Phylogeny	First report of vancomycin-resistant staphylococci isolated from healthy carriers in Brazil.	Palazzo IC, Araujo ML, Darini AL.	J Clin Microbiol	10.1128/jcm.43.1.179-185.2005	2005
	Identification and Characterization of a Novel alpha-L-Fucosidase from Enterococcus gallinarum and Its Application for Production of 2'-Fucosyllactose.	Zhang Z, Li Y, Wu M, Gao Z, Wu B, He B.	Int J Mol Sci	10.3390/ijms241411555	2023
	Vancomycin resistance gene vanC is specific to Enterococcus gallinarum.	Leclercq R, Dutka-Malen S, Duval J, Courvalin P.	Antimicrob Agents Chemother	10.1128/aac.36.9.2005	1992
Pathogenicity	Vancomycin resistance in Enterococcus gallinarum.	Vincent S, Minkler P, Bincziewski B, Etter L, Shlaes DM.	Antimicrob Agents Chemother	10.1128/aac.36.7.1392	1992
	Analysis of genes encoding D-alanine-D-alanine ligase-related enzymes in Enterococcus casseliflavus and Enterococcus flavescens.	Navarro F, Courvalin P.	Antimicrob Agents Chemother	10.1128/aac.38.8.1788	1994
	Compilation of small ribosomal subunit RNA structures.	Neefs JM, Van de Peer Y, De Rijk P, Chapelle S, De Wachter R.	Nucleic Acids Res	10.1093/nar/21.13.3025	1993
	Designing primers and evaluation of the efficiency of propidium monoazide - Quantitative polymerase chain reaction for counting the viable cells of Lactobacillus gasseri and Lactobacillus salivarius.	Lai CH, Wu SR, Pang JC, Ramireddy L, Chiang YC, Lin CK, Tsen HY.	J Food Drug Anal	10.1016/j.jfda.2016.10.004	2017
Enzymology	Development of a propidium monoazide-polymerase chain reaction assay for detection of viable Lactobacillus brevis in beer.	Ma Y, Deng Y, Xu Z, Liu J, Dong J, Yin H, Yu J, Chang Z, Wang D.	Braz J Microbiol	10.1016/j.bjm.2016.11.012	2017
Metabolism	Hydrolytic fate of deoxynivalenol-3-glucoside during digestion.	Berthiller F, Krska R, Domig KJ, Kneifel W, Juge N, Schuhmacher R, Adam G.	Toxicol Lett	10.1016/j.toxlet.2011.08.006	2011
	A Complementary Isothermal Amplification Method to the U.S. EPA Quantitative Polymerase Chain Reaction Approach for the Detection of Enterococci in Environmental Waters.	Kolm C, Martzy R, Brunner K, Mach RL, Krska R, Heinze G, Sommer R, Reischer GH, Farnleitner AH.	Environ Sci Technol	10.1021/acs.est.7b01074	2017
Enzymology	Variations of bacterial populations in human feces measured by fluorescent in situ hybridization with group-specific 16S rRNA-targeted oligonucleotide probes.	Franks AH, Harmsen HJ, Raangs GC, Jansen GJ, Schut F, Welling GW.	Appl Environ Microbiol	10.1128/aem.64.9.3336-3345.1998	1998
Genetics	Enterococcus burkinafasonensis sp. nov. isolated from human gut microbiota.	Gouba N, Yimagou EK, Hassani Y, Drancourt M, Fellag M, Mbogning Fonkou MD.	New Microbes New Infect	10.1016/j.nmni.2020.100702	2020
	Gut Microbiota Dysbiosis Associated With Altered Production of Short Chain Fatty Acids in Children With Neurodevelopmental Disorders.	Bojovic K, Ignjatovic DI, Sokovic Bajic S, Vojnovic Milutinovic D, Tomic M, Golic N, Tolinacki M.	Front Cell Infect Microbiol	10.3389/fcimb.2020.00223	2020
	Whole-Genome Sequence and Classification of 11 Endophytic Bacteria from Poison Ivy (Toxicodendron radicans).	Tran PN, Tan NE, Lee YP, Gan HM, Polter SJ, Dailey LK, Hudson AO, Savka MA.	Genome Announc	10.1128/genomea.01319-15	2015
Genetics	Molecular characteristics and comparative genomics analysis of a clinical Enterococcus casseliflavus with a resistance plasmid.	Yin M, Jiang Y, Qian C, Wu F, Ying Y, Wu C, Li P, Ying J, Li K, Xu T, Bao Q, Sun C.	Infect Drug Resist	10.2147/idr.s180254	2018
Phylogeny	Application of tRNA intergenic spacer PCR for identification of Enterococcus species.	Baele M, Baele P, Vaneechoutte M, Storms V, Butaye P, Devriese LA, Verschraegen G, Gillis M, Haesebrouck F.	J Clin Microbiol	10.1128/jcm.38.11.4201-4207.2000	2000
Genetics	Genomic analysis of Enterococcus faecium strain RAOG174 associated with acute chorioamnionitis carried antibiotic resistance gene: is it time for precise microbiological identification for appropriate antibiotic use?	Pongchaikul P, Romero R, Mongkolsuk P, Vivithanaporn P, Wongsurawat T, Jenjaroenpun P, Nitayanon P, Thaipisuttikul I, Kamlungkuea T, Singsaneh A, Santanirand P, Chaemsaithong P.	BMC Genomics	10.1186/s12864-023-09511-1	2023
Genetics	Genome Features and Secondary Metabolites Biosynthetic Potential of the Class Ktedonobacteria.	Zheng Y, Saitou A, Wang CM, Toyoda A, Minakuchi Y, Sekiguchi Y, Ueda K, Takano H, Sakai Y, Abe K, Yokota A, Yabe S.	Front Microbiol	10.3389/fmicb.2019.00893	2019
	Phylogenetic profiles of in-house microflora in drains at a food production facility: comparison and biocontrol implications of Listeria-positive and -negative bacterial populations.	Fox EM, Solomon K, Moore JE, Wall PG, Fanning S.	Appl Environ Microbiol	10.1128/aem.00468-14	2014
Enzymology	Use of cephalexin-aztreonam-arabinose agar for selective isolation of Enterococcus faecium.	Ford M, Perry JD, Gould FK.	J Clin Microbiol	10.1128/jcm.32.12.2999-3001.1994	1994
Metabolism	Inhibitory effects of Enterococcus strains obtained from a probiotic product on in vitro growth of Salmonella enterica serovar enteritidis strain IFO3313.	Theppangna W, Otsuki K, Murase T	J Food Prot	10.4315/0362-028x-69.9.2258	2006
Pathogenicity	Enterococcus gallinarum N04-0414 harbors a VanD-type vancomycin resistance operon and does not contain a D-alanine:D-alanine 2 (ddl2) gene.	Boyd DA, Miller MA, Mulvey MR	Antimicrob Agents Chemother	10.1128/AAC.50.3.1067-1070.2006	2006
Phylogeny	DNA hybridization and contour-clamped homogeneous electric field electrophoresis for identification of enterococci to the species level.	Donabedian S, Chow JW, Shlaes DM, Green M, Zervos MJ	J Clin Microbiol	10.1128/jcm.33.1.141-145.1995	1995
Phylogeny	Vancomycin susceptibility and identification of motile enterococci.	Vincent S, Knight RG, Green M, Sahm DF, Shlaes DM	J Clin Microbiol	10.1128/jcm.29.10.2335-2337.1991	1991
Genetics	Enterococcus mediterraneensis sp. nov., a new bacterium isolated from the stool of a 39-year-old Pygmy.	Takakura T, Francis R, Anani H, Bilen M, Raoult D, Bou Khalil JY.	New Microbes New Infect	10.1016/j.nmni.2019.100599	2019
Genetics	Non-contiguous finished genome sequencing and description of Enterococcus timonensis sp. nov. isolated from human sputum.	Mbogning Fonkou MD, Bilen M, Gouba N, Khelaifia S, Cadoret F, Nguyen TT, Richez M, Bittar F, Fournier PE, Raoult D, Dubourg G.	New Microbes New Infect	10.1016/j.nmni.2019.100532	2019

References

#17785	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24841
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#46855	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 18658
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#68381	Automatically annotated from API rID32STR .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#119515	Collection of Institut Pasteur ; Curators of the CIP; CIP 103013
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Enterococcus gallinarum (DSM 24841, ATCC 49573, JCM 8728)

Name and taxonomic classification

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