Enterococcus gallinarum (CIP 103692, ATCC 49608, NCDO 2311)

Name: Enterococcus gallinarum (CIP 103692, ATCC 49608, NCDO 2311)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 137163

Type strain

Strain Designation PB18, LRA 086 10 84

Culture col. no. CIP 103692 ATCC 49608 NCDO 2311 NCTC 12360 PB18 1 more

NCBI tax ID(s) 1353

Special Collections CIP

History CIP <- 1993, R. Mercier, bioMérieux, La Balme-les-Grottes, France: strain LRA 086 10 84 <- NCDO <- D. Jones, Leicester Univ., UK: strain PB18

Links

Enterococcus gallinarum PB18 is a facultative anaerobe, Gram-positive, coccus-shaped bacterium of the family Enterococcaceae.

Gram-positive coccus-shaped facultative anaerobe genome sequence Bacteria

Name and taxonomic classification

SI-ID 42579

ATCC 49608,NCDO 2311,CIP 103692,NCTC 12360,NCIMB 702311

@ref 20215

Last LPSN update 2026-02-09 11:32:49

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Enterococcaceae

Genus Enterococcus

Species Enterococcus gallinarum

Full scientific name Enterococcus gallinarum (Bridge and Sneath 1982) Collins et al. 1984

Synonyms (1)

Streptococcus gallinarum

BacDive ID	Other strains from **Enterococcus gallinarum** (52)	Type strain
5314	E. gallinarum F87/276, PB21, DSM 24841, ATCC 49573, JCM ... (type strain)
130944	E. gallinarum JM-20, DSM 28564
130945	E. gallinarum 30-31, A-C2-Ob, DSM 28565
5310	E. gallinarum F87/268, PB21, DSM 20628, ATCC 35038, NCTC ...
5311	E. gallinarum F87/277, PB24 (oder PB22), PB24 (oder PB22?), ...
5312	E. gallinarum F87/279, PB24, DSM 20718, NCDO 2315
5313	E. gallinarum DSM 25780, NCCP 11518
130946	E. gallinarum JJM0609-2-2, DSM 100110
136387	E. gallinarum D 417, CIP 105160
136575	E. gallinarum UW 701/95, BA 4174, CIP 106999
136635	E. gallinarum 2628-95, CIP 107208
139129	E. gallinarum BM4174, CIP 105985
142326	E. gallinarum CCUG 11665, LMG 8145
145500	E. gallinarum CCUG 28691
145503	E. gallinarum CCUG 28694
145504	E. gallinarum CCUG 28695
145505	E. gallinarum CCUG 28696, LMG 16201
145865	E. gallinarum CCUG 29831, LMG 16202
147081	E. gallinarum CCUG 32818, LMG 14739
147927	E. gallinarum CCUG 34517, LMG 16204
148173	E. gallinarum CCUG 34969
148419	E. gallinarum CCUG 35405
149137	E. gallinarum CCUG 36919 A
149232	E. gallinarum CCUG 37309
149980	E. gallinarum CCUG 38788
151308	E. gallinarum CCUG 43708
151591	E. gallinarum CCUG 44397
151744	E. gallinarum CCUG 44771
152029	E. gallinarum CCUG 45595
152099	E. gallinarum CCUG 45754
152181	E. gallinarum CCUG 45987
152401	E. gallinarum CCUG 46676
152468	E. gallinarum CCUG 46869
152575	E. gallinarum CCUG 47108
152783	E. gallinarum CCUG 47607
152795	E. gallinarum CCUG 47634
152811	E. gallinarum CCUG 47668
152996	E. gallinarum CCUG 48209
153335	E. gallinarum CCUG 49260
153459	E. gallinarum CCUG 49667
153532	E. gallinarum CCUG 50087
153931	E. gallinarum CCUG 51680
154033	E. gallinarum CCUG 52059
154576	E. gallinarum CCUG 54456
155363	E. gallinarum CCUG 57467
155735	E. gallinarum CCUG 59166
155748	E. gallinarum CCUG 59199
155749	E. gallinarum CCUG 59200
158937	E. gallinarum BL-249-WT-6, DSM 104116
160037	E. gallinarum Cla-CZ-15, DSM 109011
169222	E. gallinarum 0090-6-DD-A, S500, DSM 106191
169223	E. gallinarum Cla-AP-1, DSM 111134

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
37029	positive	coccus-shaped

Colony morphology

37029

Hemolysis ability1

Culture and growth conditions

Culture medium

@ref	Name	Composition	Medium link
37029	MEDIUM 6 - Columbia agar with 10 % horse blood	Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
37029	CIP Medium 72		Medium recipe at CIP
37029	CIP Medium 6		Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
37029	positive	growth	37
37029	positive	growth	25-45
37029	negative	growth	10

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
37029	facultative anaerobe
125439	microaerophile	90

Spore formation

@ref	Spore formation	Confidence
125438		91.29

Halophily

@ref	Salt	Growth	Tested relation	Concentration
37029	NaCl		growth	6.5 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	+	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	+	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	+	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	+	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
37029	4853 ChEBI	esculin	+	hydrolysis
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	+	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
37029	606565 ChEBI	hippurate	+	hydrolysis
68371	15443 ChEBI	inulin	+	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	+	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	+	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
37029	17632 ChEBI	nitrate	-	reduction
37029	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	+	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	+	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
37029	15688 ChEBI	acetoin	+

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
37029	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
37029	amylase	+
68382	beta-galactosidase	+	3.2.1.23	from API zym
37029	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	+	3.2.1.31	from API zym
37029	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
37029	gamma-glutamyltransferase	-	2.3.2.2
37029	gelatinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
37029	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
37029	ornithine decarboxylase	-	4.1.1.17
37029	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
37029	-	-	+	+	-	+	-	-	-	+	+	-	+	+	+	-	+	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
37029	not determinedn.d.	+	-	-	+	+	+	-	-	-	+	+	+	+	-	-	-	-	+	-	-	+	+	+	+	+	+	+	+	+	+	+	+	+	-	+	+	-	-	+	+/-	-	+	-	-	-	-	+	-	+/-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
37029	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
37029	2	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	43071_H02 assembly for Enterococcus gallinarum NCTC12360	contig	GCA_900461195	1353.42	8032401858	1353	69.56
66792	Enterococcus gallinarum strain NCTC12360	contig		1353.176		1353

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Enterococcus gallinarum NCTC12360
NCBI: GCA_900461195

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	73.50	no
125439	motility	BacteriaNetⓘ	no	60.30	no
125439	gram_stain	BacteriaNetⓘ	positive	88.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	90.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Enterococcus gallinarum strain NCTC12360
PATRIC: 1353.176

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	54.23	no
125438	anaerobic	anaerobicⓘ	no	81.91	yes
125438	spore-forming	spore-formingⓘ	no	91.29	no
125438	aerobic	aerobicⓘ	no	88.48	yes
125438	thermophilic	thermophileⓘ	no	92.22	yes
125438	flagellated	motile2+ⓘ	no	88.91	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	Low vancomycin MICs and fecal densities reduce the sensitivity of screening methods for vancomycin resistance in Enterococci.	Wijesuriya TM, Perry P, Pryce T, Boehm J, Kay I, Flexman J, Coombs GW, Ingram PR.	J Clin Microbiol	10.1128/jcm.00021-14	2014
	Evaluation of FASTinov Ultrarapid Flow Cytometry Antimicrobial Susceptibility Testing Directly from Positive Blood Cultures.	Silva-Dias A, Perez-Viso B, Martins-Oliveira I, Gomes R, Rodrigues AG, Canton R, Pina-Vaz C.	J Clin Microbiol	10.1128/jcm.00544-21	2021
Enzymology	ccrABEnt serine recombinase genes are widely distributed in the Enterococcus faecium and Enterococcus casseliflavus species groups and are expressed in E. faecium.	Bjorkeng EK, Tessema GT, Lundblad EW, Butaye P, Willems R, Sollid JE, Sundsfjord A, Hegstad K.	Microbiology (Reading)	10.1099/mic.0.041491-0	2010
Phylogeny	Occurrence, population structure, and antimicrobial resistance of enterococci in marginal and apical periodontitis.	Sun J, Song X, Kristiansen BE, Kjaereng A, Willems RJ, Eriksen HM, Sundsfjord A, Sollid JE.	J Clin Microbiol	10.1128/jcm.00388-09	2009
Phylogeny	Development of cpn60-based real-time quantitative PCR assays for the detection of 14 Campylobacter species and application to screening of canine fecal samples.	Chaban B, Musil KM, Himsworth CG, Hill JE.	Appl Environ Microbiol	10.1128/aem.00101-09	2009
Pathogenicity	Use of primers selective for vancomycin resistance genes to determine van genotype in enterococci and to study gene organization in VanA isolates.	Miele A, Bandera M, Goldstein BP.	Antimicrob Agents Chemother	10.1128/aac.39.8.1772	1995

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#37029	Collection of Institut Pasteur ; Curators of the CIP; CIP 103692
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Enterococcus gallinarum (CIP 103692, ATCC 49608, NCDO 2311)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Metabolite tests

Enzymes

API zym

API 50CHac

API biotype100

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900461195

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media