Name: Enterococcus gallinarum F87/268
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 5310

Type strain:

Species: Enterococcus gallinarum

Strain Designation: F87/268, PB21

Culture col. no.: DSM 20628, ATCC 35038, NCTC 11428

Strain history: <- NCTC <- P.H.A. Sneath, PB21 <- E.M. Barnes, F87/268

NCBI tax ID(s): 1353 (species)

SI-ID 343905

LMG 11207, ATCC 35038, NCTC 11428, DSM 20628, HAMBI 1717, VTT E-97776

Special Collections

DSMZ

Other strains from Enterococcus gallinarum

Section

Enterococcus gallinarum F87/268 is a microaerophile, Gram-positive human pathogen that was isolated from chicken intestine.

Gram-positive
human pathogen
microaerophile
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Enterococcaceae*
	Genus	*Enterococcus*
	Species	**Enterococcus gallinarum**
	Full Scientific Name (LPSN)	Enterococcus gallinarum (Bridge and Sneath 1982) Collins et al. 1984

Synonym

Streptococcus gallinarum

Information on morphological and physiological properties Morphology

[Ref.: #8976]	Type of hemolysis	alpha
[Ref.: #8976]	Hemolysis ability	1

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8976]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #8976]

Culture medium growth

[Ref.: #8976]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8976]

Culture medium composition

expand / minimize

[Ref.: #8976]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #8976]

Culture medium growth

[Ref.: #8976]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8976]

Culture medium composition

expand / minimize

[Ref.: #35468]

Culture medium

MEDIUM 6 - Columbia agar with 10 % horse blood

[Ref.: #35468]

Culture medium growth

[Ref.: #35468]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #8976]			growth	37 °C
[Ref.: #35468]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #8976]

Oxygen tolerance

microaerophile

[Ref.: #8976]	Murein short key	A11.31
[Ref.: #8976]	Murein types	A4alpha L-Lys-D-Asp

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68381]	alpha-cyclodextrin ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68370]	arginine ChEBI	+	hydrolysis	* from API 20STR, API rID32STR
[Ref.: #68381]	D-arabitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68370]	D-mannitol ChEBI	+	builds acid from	* from API 20STR, API rID32STR
[Ref.: #68370]	D-ribose ChEBI	+	builds acid from	* from API 20STR, API rID32STR
[Ref.: #68370]	D-sorbitol ChEBI	-	builds acid from	* from API 20STR
[Ref.: #68381]	D-tagatose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68370]	esculin ChEBI	+	hydrolysis	* from API 20STR
[Ref.: #68370]	glycogen ChEBI	-	builds acid from	* from API 20STR, API rID32STR
[Ref.: #68370]	hippurate ChEBI	+	hydrolysis	* from API 20STR, API rID32STR
[Ref.: #68370]	inulin ChEBI	+	builds acid from	* from API 20STR
[Ref.: #68370]	L-arabinose ChEBI	+	builds acid from	* from API 20STR, API rID32STR
[Ref.: #68370]	lactose ChEBI	+	builds acid from	* from API 20STR, API rID32STR
[Ref.: #68381]	maltose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	melezitose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	melibiose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	pullulan ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68370]	raffinose ChEBI	+	builds acid from	* from API 20STR, API rID32STR
[Ref.: #68381]	sorbitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68370]	starch ChEBI	+	builds acid from	* from API 20STR
[Ref.: #68381]	sucrose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68370]	trehalose ChEBI	+	builds acid from	* from API 20STR, API rID32STR
[Ref.: #68381]	urea ChEBI	-	hydrolysis	* from API rID32STR
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68370]		acetoin ChEBI	yes	* from API 20STR

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #68370]		acetoin ChEBI	+	* from API 20STR

	Enzyme	Enzyme activity	EC number
[Ref.: #68381]	Alanyl-Phenylalanyl-Proline arylamidase	-		* from API rID32STR
[Ref.: #68381]	alkaline phosphatase	-	3.1.3.1	* from API rID32STR, API 20STR
[Ref.: #68381]	alpha-galactosidase	+	3.2.1.22	* from API rID32STR, API 20STR
[Ref.: #68381]	arginine dihydrolase	+	3.5.3.6	* from API rID32STR, API 20STR
[Ref.: #68381]	beta-galactosidase	+	3.2.1.23	* from API rID32STR, API 20STR
[Ref.: #68381]	beta-glucosidase	+	3.2.1.21	* from API rID32STR, API 20STR
[Ref.: #68381]	beta-glucuronidase	+	3.2.1.31	* from API rID32STR
[Ref.: #68370]	beta-glucuronidase	-	3.2.1.31	* from API 20STR
[Ref.: #8976]	catalase	-	1.11.1.6
[Ref.: #8976]	cytochrome-c oxidase	-	1.9.3.1
[Ref.: #68381]	glycyl tryptophan arylamidase	+		* from API rID32STR
[Ref.: #68370]	leucine arylamidase	+	3.4.11.1	* from API 20STR
[Ref.: #68381]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API rID32STR, API 20STR
[Ref.: #68381]	urease	-	3.5.1.5	* from API rID32STR
	Only first 10 entries are displayed. Click here to see all.

API® 20STR:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Acetoin production (Voges Proskauer test)VP	Hippuric acid hydrolysisHIP	Esculin hydrolysis/beta-glucosidaseESC	Pyrrolidonyl arylamidasePYRA	alpha-Galactosidasealpha GAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	Alkaline phosphatasePAL	Leucine arylamidaseLAP	Arginine dihydrolaseADH	Acid from D-riboseRIB	Acid from L-arabinoseARA	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from lactoseLAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	beta hemolysis presentbeta HEM
[Ref.: #8976]	838	+	+	+	+	+	-	+	-	+	+	+	+	+	-	+	+	+	+	+	-	-

API® rID32STR:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Arginine dihydrolaseADH (Arg)	beta-Glucosidasebeta GLU	beta-Galactosidasebeta GAR	beta-Glucuronidasebeta GUR	alpha-Galactosidasealpha GAL	Alkaline PhosphatasePAL	Acid from D-riboseRIB	Acid from D-mannitolMAN	Acid from sorbitolSOR	Acid from lactoseLAC	Acid from trehaloseTRE	Acid from raffinoseRAF	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta-Galactosidasebeta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	Hydrolysis of hippuric acidHIP	Acid from glycogenGLYG	Acid from pullulanPUL	Acid from maltoseMAL	Acid from melibioseMEL	Acid from melezitoseMLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	Acid from D-tagatoseTAG	beta-Mannosidasebeta MAN	Urease/urea hydrolysisURE
[Ref.: #8976]	10493	+	+	-	+	+	-	+	+	-	+	+	+	+	+	-	+	+/-	-	+	+	+/-	+	+	-	-	+	+	-	+	+	-	-
[Ref.: #8976]	10492	+	+	+	+	+	-	+	+	-	+	+	+	+	+	-	+	+	-	+	+	+	+	+	-	-	+	+	-	-	+	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8976]	Sample type/isolated from	chicken intestine
* marker position based on {}

Isolation sources categories

#Host	#Birds	#Chicken
#Host Body-Site	#Gastrointestinal tract	#Large intestine

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8976]	Pathogenicity (human)	yes
[Ref.: #8976]	Pathogenicity (animal)	yes
[Ref.: #8976]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Enterococcus faecalis ATCC 35038	GCA_000392955	scaffold	GenBank ENA	1169290 tax ID	*
[Ref.: #66792]	Enterococcus faecalis ATCC 35038	1169290.3	wgs	PATRIC	1169290 tax ID	*
[Ref.: #66792]	Enterococcus faecalis ATCC 35038	2563366777	draft	JGI IMG/M	1169290 tax ID	*

[Ref.: #8976]

GC-content

39.8 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Enterococcus faecalis ATCC 35038 ATCC 35038 NCBI: GCA_000392955.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	59	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Enterococcus faecalis ATCC 35038 ATCC 35038 NCBI: GCA_000392955.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	88.173	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	88.782	yes
[Ref.: #69480]	aerobic	aerobicⓘ	no	92.9	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	75.606	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	94.5	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	88.5	no

Availability in culture collections External links

[Ref.: #8976]

Culture collection no.

DSM 20628, ATCC 35038, NCTC 11428

[Ref.: #74800]

SI-ID 343905

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Augmented production of extracellular superoxide by blood isolates of Enterococcus faecalis.	Huycke MM, Joyce W, Wack MF	J Infect Dis	10.1093/infdis/173.3.743	1996	*

References

#8976

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20628

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#35468 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68370

Automatically annotated from API 20STR .

#68381

Automatically annotated from API rID32STR .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#74800

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID343905.1 )

* These data were automatically processed and therefore are not curated

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Enterococcus faecalis ATCC 35038 ATCC 35038

Enterococcus faecalis ATCC 35038 ATCC 35038

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