Enterococcus gallinarum (DSM 20628, ATCC 35038, NCTC 11428)

Name: Enterococcus gallinarum (DSM 20628, ATCC 35038, NCTC 11428)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 5310

Type strain

Strain Designation F87/268, PB21

Culture col. no. DSM 20628 ATCC 35038 NCTC 11428 F87/268 PB21

NCBI tax ID(s) 1353

Special Collections DSMZ

History <- NCTC <- P.H.A. Sneath, PB21 <- E.M. Barnes, F87/268

Links

Enterococcus gallinarum F87/268 is a microaerophile human pathogen that was isolated from chicken intestine.

microaerophile human pathogen genome sequence Bacteria

Name and taxonomic classification

SI-ID 343905

LMG 11207,ATCC 35038,NCTC 11428,DSM 20628,HAMBI 1717,VTT E-97776

@ref 20215

Last LPSN update 2026-02-09 11:18:56

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Enterococcaceae

Genus Enterococcus

Species Enterococcus gallinarum

Full scientific name Enterococcus gallinarum (Bridge and Sneath 1982) Collins et al. 1984

Synonyms (1)

Streptococcus gallinarum

BacDive ID	Other strains from **Enterococcus gallinarum** (52)	Type strain
5314	E. gallinarum F87/276, PB21, DSM 24841, ATCC 49573, JCM ... (type strain)
130944	E. gallinarum JM-20, DSM 28564
130945	E. gallinarum 30-31, A-C2-Ob, DSM 28565
5311	E. gallinarum F87/277, PB24 (oder PB22), PB24 (oder PB22?), ...
5312	E. gallinarum F87/279, PB24, DSM 20718, NCDO 2315
5313	E. gallinarum DSM 25780, NCCP 11518
130946	E. gallinarum JJM0609-2-2, DSM 100110
136387	E. gallinarum D 417, CIP 105160
136575	E. gallinarum UW 701/95, BA 4174, CIP 106999
136635	E. gallinarum 2628-95, CIP 107208
137163	E. gallinarum PB18, LRA 086 10 84, CIP 103692, ATCC 49608, ...
139129	E. gallinarum BM4174, CIP 105985
142326	E. gallinarum CCUG 11665, LMG 8145
145500	E. gallinarum CCUG 28691
145503	E. gallinarum CCUG 28694
145504	E. gallinarum CCUG 28695
145505	E. gallinarum CCUG 28696, LMG 16201
145865	E. gallinarum CCUG 29831, LMG 16202
147081	E. gallinarum CCUG 32818, LMG 14739
147927	E. gallinarum CCUG 34517, LMG 16204
148173	E. gallinarum CCUG 34969
148419	E. gallinarum CCUG 35405
149137	E. gallinarum CCUG 36919 A
149232	E. gallinarum CCUG 37309
149980	E. gallinarum CCUG 38788
151308	E. gallinarum CCUG 43708
151591	E. gallinarum CCUG 44397
151744	E. gallinarum CCUG 44771
152029	E. gallinarum CCUG 45595
152099	E. gallinarum CCUG 45754
152181	E. gallinarum CCUG 45987
152401	E. gallinarum CCUG 46676
152468	E. gallinarum CCUG 46869
152575	E. gallinarum CCUG 47108
152783	E. gallinarum CCUG 47607
152795	E. gallinarum CCUG 47634
152811	E. gallinarum CCUG 47668
152996	E. gallinarum CCUG 48209
153335	E. gallinarum CCUG 49260
153459	E. gallinarum CCUG 49667
153532	E. gallinarum CCUG 50087
153931	E. gallinarum CCUG 51680
154033	E. gallinarum CCUG 52059
154576	E. gallinarum CCUG 54456
155363	E. gallinarum CCUG 57467
155735	E. gallinarum CCUG 59166
155748	E. gallinarum CCUG 59199
155749	E. gallinarum CCUG 59200
158937	E. gallinarum BL-249-WT-6, DSM 104116
160037	E. gallinarum Cla-CZ-15, DSM 109011
169222	E. gallinarum 0090-6-DD-A, S500, DSM 106191
169223	E. gallinarum Cla-AP-1, DSM 111134

Morphology

Colony morphology

@ref	Type of hemolysis	Hemolysis ability
8976	alpha	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
8976	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
8976	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
35468	MEDIUM 6 - Columbia agar with 10 % horse blood		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)

Culture temp

@ref	Growth	Type	Temperature (°C)
8976	positive	growth	37
35468	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
8976	microaerophile
125439	microaerophile	97.1

Murein

@ref	Murein short key	Type
8976	A11.31	A4alpha L-Lys-D-Asp

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68381	40585 ChEBI	alpha-cyclodextrin	+	builds acid from	from API rID32STR
68381	29016 ChEBI	arginine	+	hydrolysis	from API rID32STR
68370	29016 ChEBI	arginine	+	hydrolysis	from API 20STR
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68381	16899 ChEBI	D-mannitol	+	builds acid from	from API rID32STR
68370	16899 ChEBI	D-mannitol	+	builds acid from	from API 20STR
68381	16988 ChEBI	D-ribose	+	builds acid from	from API rID32STR
68370	16988 ChEBI	D-ribose	+	builds acid from	from API 20STR
68370	17924 ChEBI	D-sorbitol	-	builds acid from	from API 20STR
68381	16443 ChEBI	D-tagatose	+	builds acid from	from API rID32STR
68370	4853 ChEBI	esculin	+	hydrolysis	from API 20STR
68381	28087 ChEBI	glycogen	-	builds acid from	from API rID32STR
68370	28087 ChEBI	glycogen	-	builds acid from	from API 20STR
68381	606565 ChEBI	hippurate	+	hydrolysis	from API rID32STR
68370	606565 ChEBI	hippurate	+	hydrolysis	from API 20STR
68370	15443 ChEBI	inulin	+	builds acid from	from API 20STR
68381	30849 ChEBI	L-arabinose	+	builds acid from	from API rID32STR
68370	30849 ChEBI	L-arabinose	+	builds acid from	from API 20STR
68381	17716 ChEBI	lactose	+	builds acid from	from API rID32STR
68370	17716 ChEBI	lactose	+	builds acid from	from API 20STR
68381	17306 ChEBI	maltose	+	builds acid from	from API rID32STR
68381	6731 ChEBI	melezitose	-	builds acid from	from API rID32STR
68381	28053 ChEBI	melibiose	+	builds acid from	from API rID32STR
68381	27941 ChEBI	pullulan	-	builds acid from	from API rID32STR
68381	16634 ChEBI	raffinose	+	builds acid from	from API rID32STR
68370	16634 ChEBI	raffinose	+	builds acid from	from API 20STR
68381	30911 ChEBI	sorbitol	-	builds acid from	from API rID32STR
68370	28017 ChEBI	starch	+	builds acid from	from API 20STR
68381	17992 ChEBI	sucrose	+	builds acid from	from API rID32STR
68381	27082 ChEBI	trehalose	+	builds acid from	from API rID32STR
68370	27082 ChEBI	trehalose	+	builds acid from	from API 20STR
68381	16199 ChEBI	urea	-	hydrolysis	from API rID32STR

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68370	15688 ChEBI	acetoin		from API 20STR

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
68370	15688 ChEBI	acetoin	+	from API 20STR

Enzymes

@ref	Value	Activity	Ec
68381	Alanyl-Phenylalanyl-Proline arylamidase	-		from API rID32STR
68381	alkaline phosphatase	-	3.1.3.1	from API rID32STR
68370	alkaline phosphatase	-	3.1.3.1	from API 20STR
68370	alpha-galactosidase	+	3.2.1.22	from API 20STR
68381	alpha-galactosidase	+	3.2.1.22	from API rID32STR
68381	arginine dihydrolase	+	3.5.3.6	from API rID32STR
68370	arginine dihydrolase	+	3.5.3.6	from API 20STR
68381	beta-galactosidase	+	3.2.1.23	from API rID32STR
68370	beta-galactosidase	+	3.2.1.23	from API 20STR
68370	beta-glucosidase	+	3.2.1.21	from API 20STR
68381	beta-glucosidase	+	3.2.1.21	from API rID32STR
68381	beta-glucuronidase	+	3.2.1.31	from API rID32STR
68370	beta-glucuronidase	-	3.2.1.31	from API 20STR
8976	catalase	-	1.11.1.6
8976	cytochrome-c oxidase	-	1.9.3.1
68381	glycyl tryptophan arylamidase	+		from API rID32STR
68370	leucine arylamidase	+	3.4.11.1	from API 20STR
68381	pyrrolidonyl arylamidase	+	3.4.19.3	from API rID32STR
68370	pyrrolidonyl arylamidase	+	3.4.19.3	from API 20STR
68381	urease	-	3.5.1.5	from API rID32STR

API 20STR

@ref	Acetoin production (Voges Proskauer test)VP	HIP	ESC	PYRA	alpha GAL	beta GUR	beta GAL	PAL	LAP	ADH	RIB	ARA	MAN	SOR	LAC	TRE	INU	RAF	AMD	GLYG	beta hemolysis presentbeta HEM
8976	+	+	+	+	+	-	+	-	+	+	+	+	+	-	+	+	+	+	+	-	-

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
8976	+	+	-	+	+	-	+	+	-	+	+	+	+	+	-	+	+/-	-	+	+	+/-	+	+	-	-	+	+	-	+	+	-	-
8976	+	+	+	+	+	-	+	+	-	+	+	+	+	+	-	+	+	-	+	+	+	+	+	-	-	+	+	-	-	+	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Birds	#Chicken
#Host Body-Site	#Gastrointestinal tract	#Large intestine

Isolation

8976

Sample typechicken intestine

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Pathogenicity animal	Biosafety level	Biosafety level comment
8976			2	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	Ente_faec_ATCC_35038_V1 assembly for Enterococcus faecalis ATCC 35038	scaffold	GCA_000392955	1169290.3	2563366777	1169290	75.26

GC content

@ref	GC-content (mol%)	Method
8976	39.8	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Enterococcus faecalis ATCC 35038
NCBI: GCA_000392955

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	97.10	no
125439	gram_stain	BacteriaNetⓘ	variable	77.50	no
125439	motility	BacteriaNetⓘ	no	62.90	no
125439	spore_formation	BacteriaNetⓘ	no	64.20	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Enterococcus faecalis ATCC 35038 ATCC 35038
NCBI: GCA_000392955.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	88.17	no
125438	anaerobic	anaerobicⓘ	no	88.78	yes
125438	aerobic	aerobicⓘ	no	92.90	no
125438	spore-forming	spore-formingⓘ	no	75.61	no
125438	thermophilic	thermophileⓘ	no	94.50	yes
125438	flagellated	motile2+ⓘ	no	88.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Hydrolytic fate of deoxynivalenol-3-glucoside during digestion.	Berthiller F, Krska R, Domig KJ, Kneifel W, Juge N, Schuhmacher R, Adam G.	Toxicol Lett	10.1016/j.toxlet.2011.08.006	2011
	A Complementary Isothermal Amplification Method to the U.S. EPA Quantitative Polymerase Chain Reaction Approach for the Detection of Enterococci in Environmental Waters.	Kolm C, Martzy R, Brunner K, Mach RL, Krska R, Heinze G, Sommer R, Reischer GH, Farnleitner AH.	Environ Sci Technol	10.1021/acs.est.7b01074	2017
Enzymology	Variations of bacterial populations in human feces measured by fluorescent in situ hybridization with group-specific 16S rRNA-targeted oligonucleotide probes.	Franks AH, Harmsen HJ, Raangs GC, Jansen GJ, Schut F, Welling GW.	Appl Environ Microbiol	10.1128/aem.64.9.3336-3345.1998	1998
Enzymology	Rapid identification of clinically relevant Enterococcus species by fluorescence in situ hybridization.	Wellinghausen N, Bartel M, Essig A, Poppert S.	J Clin Microbiol	10.1128/jcm.00861-07	2007
Phylogeny	Screening of stool samples for identification of vancomycin-resistant Enterococcus isolates should include the methyl-alpha-D-glucopyranoside test to differentiate nonmotile Enterococcus gallinarum from E. faecium.	Turenne CY, Hoban DJ, Karlowsky JA, Zhanel GG, Kabani AM.	J Clin Microbiol	10.1128/jcm.36.8.2333-2335.1998	1998
Phylogeny	Evaluation of D-xylose and 1% methyl-alpha-D-glucopyranoside fermentation tests for distinguishing Enterococcus gallinarum from Enterococcus faecium.	Chen DK, Pearce L, McGeer A, Low DE, Willey BM.	J Clin Microbiol	10.1128/jcm.38.10.3652-3655.2000	2000
Pathogenicity	Vancomycin susceptibility and identification of motile enterococci.	Vincent S, Knight RG, Green M, Sahm DF, Shlaes DM.	J Clin Microbiol	10.1128/jcm.29.10.2335-2337.1991	1991
Phylogeny	DNA hybridization and contour-clamped homogeneous electric field electrophoresis for identification of enterococci to the species level.	Donabedian S, Chow JW, Shlaes DM, Green M, Zervos MJ.	J Clin Microbiol	10.1128/jcm.33.1.141-145.1995	1995
Phylogeny	Description and evaluation of the semiautomated 4-hour rapid ID 32 Strep method for identification of streptococci and members of related genera.	Freney J, Bland S, Etienne J, Desmonceaux M, Boeufgras JM, Fleurette J.	J Clin Microbiol	10.1128/jcm.30.10.2657-2661.1992	1992
Phylogeny	Species identities of enterococci isolated from clinical specimens.	Ruoff KL, de la Maza L, Murtagh MJ, Spargo JD, Ferraro MJ.	J Clin Microbiol	10.1128/jcm.28.3.435-437.1990	1990
	Phylogenetic profiles of in-house microflora in drains at a food production facility: comparison and biocontrol implications of Listeria-positive and -negative bacterial populations.	Fox EM, Solomon K, Moore JE, Wall PG, Fanning S.	Appl Environ Microbiol	10.1128/aem.00468-14	2014
Enzymology	Use of cephalexin-aztreonam-arabinose agar for selective isolation of Enterococcus faecium.	Ford M, Perry JD, Gould FK.	J Clin Microbiol	10.1128/jcm.32.12.2999-3001.1994	1994
Metabolism	Augmented production of extracellular superoxide by blood isolates of Enterococcus faecalis.	Huycke MM, Joyce W, Wack MF	J Infect Dis	10.1093/infdis/173.3.743	1996

References

#8976	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20628
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#35468	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68370	Automatically annotated from API 20STR .
#68381	Automatically annotated from API rID32STR .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Enterococcus gallinarum (DSM 20628, ATCC 35038, NCTC 11428)

Name and taxonomic classification

Morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Murein

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20STR

API rID32STR

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000392955

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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