Enterococcus faecium U0317 is a microaerophile bacterium that was isolated from clinical isolate .
microaerophile genome sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Bacillota |
| Class Bacilli |
| Order Lactobacillales |
| Family Enterococcaceae |
| Genus Enterococcus |
| Species Enterococcus faecium |
| Full scientific name Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-Bälz 1984 |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 18027 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 18027 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | Medium recipe at MediaDive | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 18027 | positive | growth | 37 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68381 | 29016 ChEBI | arginine | + | hydrolysis | from API rID32STR |
| 68370 | 29016 ChEBI | arginine | + | hydrolysis | from API 20STR |
| 68381 | 18333 ChEBI | D-arabitol | - | builds acid from | from API rID32STR |
| 68381 | 16899 ChEBI | D-mannitol | + | builds acid from | from API rID32STR |
| 68370 | 16899 ChEBI | D-mannitol | + | builds acid from | from API 20STR |
| 68381 | 16988 ChEBI | D-ribose | + | builds acid from | from API rID32STR |
| 68370 | 16988 ChEBI | D-ribose | + | builds acid from | from API 20STR |
| 68381 | 16443 ChEBI | D-tagatose | - | builds acid from | from API rID32STR |
| 68370 | 4853 ChEBI | esculin | + | hydrolysis | from API 20STR |
| 68381 | 28087 ChEBI | glycogen | - | builds acid from | from API rID32STR |
| 68370 | 28087 ChEBI | glycogen | - | builds acid from | from API 20STR |
| 68381 | 606565 ChEBI | hippurate | + | hydrolysis | from API rID32STR |
| 68370 | 606565 ChEBI | hippurate | + | hydrolysis | from API 20STR |
| 68370 | 15443 ChEBI | inulin | - | builds acid from | from API 20STR |
| 68381 | 30849 ChEBI | L-arabinose | + | builds acid from | from API rID32STR |
| 68370 | 30849 ChEBI | L-arabinose | + | builds acid from | from API 20STR |
| 68381 | 17716 ChEBI | lactose | + | builds acid from | from API rID32STR |
| 68370 | 17716 ChEBI | lactose | + | builds acid from | from API 20STR |
| 68381 | 17306 ChEBI | maltose | + | builds acid from | from API rID32STR |
| 68381 | 6731 ChEBI | melezitose | - | builds acid from | from API rID32STR |
| 68381 | 27941 ChEBI | pullulan | - | builds acid from | from API rID32STR |
| 68381 | 30911 ChEBI | sorbitol | - | builds acid from | from API rID32STR |
| 68381 | 17992 ChEBI | sucrose | + | builds acid from | from API rID32STR |
| 68381 | 27082 ChEBI | trehalose | + | builds acid from | from API rID32STR |
| 68370 | 27082 ChEBI | trehalose | + | builds acid from | from API 20STR |
| 68381 | 16199 ChEBI | urea | - | hydrolysis | from API rID32STR |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68381 | Alanyl-Phenylalanyl-Proline arylamidase | - | from API rID32STR | |
| 68381 | alkaline phosphatase | - | 3.1.3.1 | from API rID32STR |
| 68370 | alkaline phosphatase | - | 3.1.3.1 | from API 20STR |
| 68381 | alpha-galactosidase | + | 3.2.1.22 | from API rID32STR |
| 68381 | arginine dihydrolase | + | 3.5.3.6 | from API rID32STR |
| 68370 | arginine dihydrolase | + | 3.5.3.6 | from API 20STR |
| 68370 | beta-galactosidase | + | 3.2.1.23 | from API 20STR |
| 68381 | beta-galactosidase | + | 3.2.1.23 | from API rID32STR |
| 68381 | beta-glucosidase | + | 3.2.1.21 | from API rID32STR |
| 68370 | beta-glucosidase | + | 3.2.1.21 | from API 20STR |
| 68381 | beta-glucuronidase | - | 3.2.1.31 | from API rID32STR |
| 68370 | beta-glucuronidase | - | 3.2.1.31 | from API 20STR |
| 18027 | catalase | - | 1.11.1.6 | |
| 18027 | cytochrome-c oxidase | - | 1.9.3.1 | |
| 68381 | glycyl tryptophan arylamidase | + | from API rID32STR | |
| 68370 | leucine arylamidase | - | 3.4.11.1 | from API 20STR |
| 68381 | urease | - | 3.5.1.5 | from API rID32STR |
| @ref | Acetoin production (Voges Proskauer test)VP | HIP | ESC | PYRA | alpha GAL | beta GUR | beta GAL | PAL | LAP | ADH | RIB | ARA | MAN | SOR | LAC | TRE | INU | RAF | AMD | GLYG | beta hemolysis presentbeta HEM | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18027 | + | + | + | - | - | - | + | - | - | + | + | + | + | - | + | + | - | + | +/- | - | not determinedn.d. | |
| 18027 | + | + | + | + | +/- | - | + | - | - | + | + | + | + | +/- | + | + | - | - | +/- | - | not determinedn.d. |
| @ref | ADH (Arg) | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | Acid from alpha-cyclodextrinCDEX | Acetoin production (Voges Proskauer test)VP | Alanyl-Phenylalanyl-Proline arylamidaseAPPA | beta GAL | Pyrrolidonyl arylamidasePyrA | N-Acetyl-glucosaminidasebeta NAG | Glycyl-tryptophan arylamidaseGTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Acidification of methyl beta-D-glucopyranosideMbeta DG | TAG | beta MAN | URE | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18027 | + | + | + | - | + | - | + | + | - | + | + | + | + | + | - | + | + | - | + | + | + | + | + | - | - | + | + | - | + | - | + | - | |
| 18027 | + | + | + | - | + | - | + | + | - | + | + | + | + | + | - | + | + | - | + | + | + | + | + | - | - | + | + | - | + | - | + | - | |
| 18027 | + | + | + | - | + | - | + | + | - | + | + | - | + | + | - | - | + | - | + | - | +/- | + | + | - | - | + | - | - | - | - | +/- | - | |
| 18027 | + | + | - | - | + | - | + | + | - | + | + | + | + | + | - | + | + | - | + | + | + | + | + | - | - | + | + | - | + | - | +/- | - |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Infection | #Disease | - | |
| #Infection | #Medical environment | #Clinic | |
| #Host Body-Site | #Urogenital tract | - |
| @ref | Sample type | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|
| 18027 | clinical isolate (urinary tract infection) | Utrecht | Netherlands | NLD | Europe |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM17291v1 assembly for Enterococcus faecium U0317 | contig | 547468 | 32.74 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 57.70 | no |
| 125439 | motility | BacteriaNetⓘ | no | 52.10 | no |
| 125439 | gram_stain | BacteriaNetⓘ | variable | 76.30 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 94.00 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 91.30 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 89.68 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 77.98 | no |
| 125438 | aerobic | aerobicⓘ | no | 96.64 | no |
| 125438 | thermophilic | thermophileⓘ | no | 97.50 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 87.00 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Identification of the novel potential pathogen Trueperella pecoris with interspecies significance by LAMP diagnostics. | Kreitlow A, Ningrum SG, Lammler C, Erhard M, Hoffmann C, Plotz M, Abdulmawjood A. | Sci Rep | 10.1038/s41598-023-40787-1 | 2023 | ||
| Treatment of Clinically Important Bacteria With Cold Atmospheric Plasma. | Ding R, Song J, Huang X, Tan L, Rao X, Yang Y. | Microb Biotechnol | 10.1111/1751-7915.70219 | 2025 | ||
| Combined Loop-Mediated Isothermal Amplification Assays for Rapid Detection and One-Step Differentiation of Campylobacter jejuni and Campylobacter coli in Meat Products. | Kreitlow A, Becker A, Ahmed MFE, Kittler S, Schotte U, Plotz M, Abdulmawjood A. | Front Microbiol | 10.3389/fmicb.2021.668824 | 2021 | ||
| Rapid Diagnostic of Streptococcus suis in Necropsy Samples of Pigs by thrA-Based Loop-Mediated Isothermal Amplification Assay. | Hess J, Kreitlow A, Rohn K, Hennig-Pauka I, Abdulmawjood A. | Microorganisms | 10.3390/microorganisms11102447 | 2023 | ||
| Pathogenicity | Antibiofilm Activity of the Brown Alga Halidrys siliquosa against Clinically Relevant Human Pathogens. | Busetti A, Thompson TP, Tegazzini D, Megaw J, Maggs CA, Gilmore BF. | Mar Drugs | 10.3390/md13063581 | 2015 | |
| Pathogenicity | Detection and characterization of bacterial polysaccharides in drug-resistant enterococci. | Ali L, Blum HE, Sakiotanc T | Glycoconj J | 10.1007/s10719-019-09881-3 | 2019 | |
| Pathogenicity | Identification and functional characterization of the putative polysaccharide biosynthesis protein (CapD) of Enterococcus faecium U0317. | Ali L, Spiess M, Wobser D, Rodriguez M, Blum HE, Sakiotanc T | Infect Genet Evol | 10.1016/j.meegid.2015.11.020 | 2015 | |
| Phylogeny | Chemical structure of wall teichoic acid isolated from Enterococcus faecium strain U0317. | Bychowska A, Theilacker C, Czerwicka M, Marszewska K, Huebner J, Holst O, Stepnowski P, Kaczynski Z | Carbohydr Res | 10.1016/j.carres.2011.09.026 | 2011 |
| #18027 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25390 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68370 | Automatically annotated from API 20STR . |
| #68381 | Automatically annotated from API rID32STR . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive5303.20251217.10
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BacDive in 2025: the core database for prokaryotic strain data