Name: Enterococcus faecium JCM 8903
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 165966

Type strain:

Species: Enterococcus faecium

Culture col. no.: JCM 8903, NCTC 12202

Strain history: NCTC 12202 <-- A. H. C. Uttley No. 7.

NCBI tax ID(s): 1352 (species)

SI-ID 115032

NCTC 12202

Special Collections

Other strains from Enterococcus faecium

Section

Enterococcus faecium JCM 8903 is a Gram-positive bacterium that was isolated from CVP site.

Gram-positive
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Enterococcaceae*
	Genus	*Enterococcus*
	Species	**Enterococcus faecium**
	Full Scientific Name (LPSN)	Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-Bälz 1984

Synonym

Streptococcus faecium

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %92.014

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	CVP site
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB690252 (>99% sequence identity) for Enterococcus from Microbeatlas

Aquatic Samples	2532
Soil Samples	1007
Animal Samples	51351
Plant Samples	654
Total Samples	55544

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Enterococcus faecium gene for 16S rRNA, partial sequence, strain: JCM 8903	AB690252	1454	GenBank ENA	1352 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Enterococcus faecium NCTC12202	GCA_900448035	contig	GenBank ENA	1352 tax ID	*
[Ref.: #66792]	Enterococcus faecium strain NCTC12202	1352.4071	wgs	PATRIC	1352 tax ID	*
[Ref.: #66792]	Enterococcus faecium strain NCTC12202	1352.12026	wgs	PATRIC	1352 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Enterococcus faecium strain NCTC12202 PATRIC: 1352.12026
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	58	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Enterococcus faecium strain NCTC12202 PATRIC: 1352.4071
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	92.014	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	90.739	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	78.349	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	95.98	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	97.5	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	87.5	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 8903, NCTC 12202

[Ref.: #114680]

SI-ID 115032

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#114680

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID115032.1 )

* These data were automatically processed and therefore are not curated

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Enterococcus faecium strain NCTC12202

Enterococcus faecium strain NCTC12202

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