Gluconobacter oxydans (DSM 46616, ATCC 9844, CCM 2371)

Name: Gluconobacter oxydans (DSM 46616, ATCC 9844, CCM 2371)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 51

Type strain

Strain Designation No 27, Porges 27

Culture col. no. DSM 46616 ATCC 9844 CCM 2371 IAM 1818 IMET 10510 8 more

NCBI tax ID(s) 442

Special Collections DSMZ JCM

History <- IMET <- CCM <- IAM <- NRRL <- N. Porges (Acetobacter melanogenus), No 27 IAM 1818 <-- NRRL B-58 ("Gluconobacter melanogenus") <-- N. Porges 27 <-- R. H. Vaughum.

Links

Gluconobacter oxydans No 27 is a bacterium of the family Acetobacteraceae.

genome sequence Bacteria

Name and taxonomic classification

SI-ID 2901

LMG 1387,ATCC 9844,CCM 2371,IAM 1818,IMET 10510,NCIB 8086,NRRL B-58,DSM 46616,NCIMB 8086,NBIMCC 1045,JCM 20280

@ref 20215

Last LPSN update 2026-02-09 11:17:47

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodospirillales

Family Acetobacteraceae

Genus Gluconobacter

Species Gluconobacter oxydans

Full scientific name Gluconobacter oxydans (Henneberg 1897) De Ley 1961 (Approved Lists 1980)

Synonyms (11)

Gluconobacter oxydans subsp. suboxydans
"Gluconobacter industrius"
Gluconobacter oxydans subsp. melanogenes
"Acetomonas suboxydans"
"Bacterium oxydans"
"Gluconobacter suboxydans"
Gluconobacter uchimurae
Gluconobacter oxydans subsp. industrius
"Acetobacter suboxydans"
"Acetobacter melanogenus"
"Bacterium industrium"

BacDive ID	Other strains from **Gluconobacter oxydans** (23)	Type strain
48	G. oxydans I, 1, DSM 3503, ATCC 19357, DSM 4494, IAM ... (type strain)
46	G. oxydans DSM 2343, ATCC 621H, NCIB 8036, CIP 104215, ...
47	G. oxydans B 4099, DSM 2003, CN 1221
49	G. oxydans DSM 7145, ATCC 19357, NCIB 9013
50	G. oxydans DSM 46615, ATCC 12303, CCM 1804, IFO 3262, ...
52	G. oxydans DSM 50049, ATCC 621, CIP 104737, NCIB 7069, ...
23496	G. oxydans DSM 4494, ATCC 19357, NCIB 9013
139194	G. oxydans CIP 104736, ATCC 9324, IFO 3171, NCTC 4739, ...
143264	G. oxydans CCUG 18134, ATCC 33447, LMG 1581
143265	G. oxydans CCUG 18136, ATCC 33446, LMG 1674
152146	G. oxydans CCUG 45891
155021	G. oxydans CCUG 56122
155022	G. oxydans CCUG 56123
162844	G. oxydans JCM 20282, IAM 1821, IFO 3293, LMG 1385, ...
162845	G. oxydans JCM 20283, BCRC 10384, IAM 1822, IFO 3294, ...
162851	G. oxydans JCM 20294, IAM 1839
162852	G. oxydans JCM 20295, IAM 1841
162853	G. oxydans JCM 20296, IAM 1842, LMG 1425
162920	G. oxydans JCM 20430, IAM 12138, IFO 3010, NBRC 3010
163101	G. oxydans JCM 21178, ATCC 11894, CCM 1769, IAM 14365, ...
163102	G. oxydans JCM 21179, ATCC 23772, IAM 14366, LMG 1399, ...
163103	G. oxydans JCM 21180, ATCC 23755, CCM 1795, IAM 14367, ...
163111	G. oxydans JCM 21218, ATCC 15164, IAM 14435, IFO 3243, ...

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
12588	GLUCONOBACTER OXYDANS MEDIUM (DSMZ Medium 105)	Medium recipe at MediaDive	Name: GLUCONOBACTER OXYDANS MEDIUM (DSMZ Medium 105) Composition: Glucose 100.0 g/l CaCO3 20.0 g/l Agar 15.0 g/l Yeast extract 10.0 g/l Distilled water
12588	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
12588	YPM MEDIUM (DSMZ Medium 360)	Medium recipe at MediaDive	Name: YPM MEDIUM (DSMZ Medium 360) Composition: Mannitol 25.0 g/l Agar 12.0 g/l Yeast extract 5.0 g/l Peptone 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
12588	positive	growth	30
67770	positive	growth	25

Physiology and metabolism

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
12588	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
124043	ASM2018092v1 assembly for Gluconobacter oxydans NRRL B-58	scaffold	GCA_020180925	442.48	442	64.12

GC content

12588

GC-content (mol%)60.6

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Fermentative Synthesis of Gluconic and Xylonic Acids from Hydrolyzed Palm Fronds Using Gluconobacter oxydans	Hidayatullah I, Maritza D, Yohda M, Sahlan M, Kusmayadi A, Leong Y, Hermansyah H.	Bioengineering (Basel)		2025
Phylogeny	Towards Bioleaching of a Vanadium Containing Magnetite for Metal Recovery.	Bellenberg S, Turner S, Seidel L, van Wyk N, Zhang R, Sachpazidou V, Embile RF, Walder I, Leiviska T, Dopson M.	Front Microbiol	10.3389/fmicb.2021.693615	2021
	Reexamination of the association between melting point, buoyant density, and chemical base composition of deoxyribonucleic acid.	De Ley J.	J Bacteriol	10.1128/jb.101.3.738-754.1970	1970
	Bio-accelerated weathering of ultramafic minerals with Gluconobacter oxydans.	Lee JJ, Plante L, Pian B, Marecos S, Medin SA, Klug JD, Reid MC, Gadikota G, Gazel E, Barstow B.	Sci Rep	10.1038/s41598-025-99655-9	2025
	Determining the functional role of the Gluconobacter oxydans GOX1969 protein as a BamB homolog.	Ariano K, Schweiger P.	Microbiol Spectr	10.1128/spectrum.01060-24	2024
	Generation of a Gluconobacter oxydans knockout collection for improved extraction of rare earth elements.	Schmitz AM, Pian B, Medin S, Reid MC, Wu M, Gazel E, Barstow B.	Nat Commun	10.1038/s41467-021-27047-4	2021

References

#12588	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46616
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Gluconobacter oxydans (DSM 46616, ATCC 9844, CCM 2371)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_020180925

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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