Name: Gluconobacter oxydans JCM 21179
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 163102

Type strain:

Species: Gluconobacter oxydans

Culture col. no.: JCM 21179, ATCC 23772, IAM 14366, LMG 1399, NCIMB 5595, NCTC 5595

Strain history: IAM 14366 <-- NCIB 5595 <-- NCTC 5595 ("Acetobacter suboxidans subsp. muciparum") <-- A. C. Thaysen.

NCBI tax ID(s): 442 (species)

SI-ID 2906

LMG 1399, ATCC 23772, NCIB 5595, NCTC 5595, NCIMB 5595, VKM B-1280, IAM 14366, NCIM 2525, JCM 21179

Special Collections

Other strains from Gluconobacter oxydans

Section

Gluconobacter oxydans JCM 21179 is a Gram-negative bacterium that was isolated from Beer.

Gram-negative
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Acetobacteraceae*
	Genus	*Gluconobacter*
	Species	**Gluconobacter oxydans**
	Full Scientific Name (LPSN)	Gluconobacter oxydans (Henneberg 1897) De Ley 1961 (Approved Lists 1980)

	Synonym	Gluconobacter oxydans subsp. suboxydans
	Synonym	"Acetomonas* suboxydans"*
	Synonym	"Gluconobacter* industrius"*
	Synonym	"Bacterium* oxydans"*
	Synonym	"Gluconobacter* suboxydans"*
	Synonym	Gluconobacter uchimurae
	Synonym	"Bacterium* industrium"*
	Synonym	Gluconobacter oxydans subsp. industrius
	Synonym	Gluconobacter oxydans subsp. melanogenes
	Synonym	"Acetobacter* suboxydans"*
	Synonym	"Acetobacter* melanogenus"*

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %97.833

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	25 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %90.952

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Beer
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Gluconobacter oxydans LMG 1399	GCA_001580635	contig	GenBank ENA	442 tax ID	*
[Ref.: #66792]	Gluconobacter oxydans strain LMG 1399	442.6	wgs	PATRIC	442 tax ID	*
[Ref.: #66792]	Gluconobacter oxydans LMG 1399	2724679586	draft	JGI IMG/M	442 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Gluconobacter oxydans strain LMG 1399 PATRIC: 442.6
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	97.833	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	85.625	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	90.952	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	80.527	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	95.932	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	63.647	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 21179, ATCC 23772, IAM 14366, LMG 1399, NCIMB 5595, NCTC 5595

[Ref.: #113869]

SI-ID 2906

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#113869

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID2906.1 )

* These data were automatically processed and therefore are not curated

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Gluconobacter oxydans strain LMG 1399

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