Name: Staphylococcus epidermidis EDCC 5245
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 24586

Type strain:

Species: Staphylococcus epidermidis

Strain Designation: EDCC 5245

Culture col. no.: DSM 28765

Strain history: <- E. Domann, Justus-Liebig-Universität, Giessen, Germany; EDCC 5245

NCBI tax ID(s): 1282 (species)

SI-ID 399942

DSM 28765

Special Collections

DSMZ
DZIF

Other strains from Staphylococcus epidermidis

Section

Staphylococcus epidermidis EDCC 5245 is a human pathogen that was isolated from human patient, blood culture.

human pathogen
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Staphylococcaceae*
	Genus	*Staphylococcus*
	Species	**Staphylococcus epidermidis**
	Full Scientific Name (LPSN)	Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980)

Synonym

"Albococcus epidermidis"

Information on morphological and physiological properties Morphology

[Ref.: #20831]	Type of hemolysis	gamma
[Ref.: #20831]	Incubation period	1-2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #20831]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #20831]

Culture medium growth

[Ref.: #20831]

Culture medium link

Medium recipe at MediaDive

[Ref.: #20831]

Culture medium composition

expand / minimize

[Ref.: #20831]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #20831]

Culture medium growth

[Ref.: #20831]

Culture medium link

Medium recipe at MediaDive

[Ref.: #20831]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #20831]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

Note that the displayed test results represent raw data and therefore may deviate!

Antibiotic susceptibility testing

Test 1

Reference

[Ref.: #20831]
Mueller-Hinton Agar
37
1
aerob
yes
Inhibition zone diameter in mm
24-26
34
28
30
28
40
36
34
resistant0
>50
32-34
34
30
32
22
12
34-36
32
32-34
10
18
28
20
12
32
28
32-34
32
40
50
36-38
40
resistant0
32
20
32

Only first 15 entries are displayed. Click here to see all.

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68375]	arabinose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	arginine ChEBI	-	hydrolysis	* from API ID32STA
[Ref.: #68375]	D-fructose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	D-glucose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	D-mannitol ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	D-mannose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	D-ribose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	esculin ChEBI	-	hydrolysis	* from API ID32STA
[Ref.: #68375]	lactose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	maltose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	nitrate ChEBI	+	reduction	* from API ID32STA
[Ref.: #68375]	ornithine ChEBI	-	degradation	* from API ID32STA
[Ref.: #68375]	raffinose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	sucrose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	urea ChEBI	+	hydrolysis	* from API ID32STA
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68375]		acetoin ChEBI	yes	* from API ID32STA

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #68375]		acetoin ChEBI	+	* from API ID32STA

	Enzyme	Enzyme activity	EC number
[Ref.: #68375]	alkaline phosphatase	+	3.1.3.1	* from API ID32STA
[Ref.: #68375]	arginine dihydrolase	-	3.5.3.6	* from API ID32STA
[Ref.: #68375]	beta-galactosidase	-	3.2.1.23	* from API ID32STA
[Ref.: #68375]	beta-glucosidase	-	3.2.1.21	* from API ID32STA
[Ref.: #68375]	beta-glucuronidase	-	3.2.1.31	* from API ID32STA
[Ref.: #20831]	catalase	+	1.11.1.6
[Ref.: #20831]	cytochrome-c oxidase	-	1.9.3.1
[Ref.: #68375]	L-arginine arylamidase	-		* from API ID32STA
[Ref.: #68375]	ornithine decarboxylase	-	4.1.1.17	* from API ID32STA
[Ref.: #68375]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API ID32STA
[Ref.: #68375]	urease	+	3.5.1.5	* from API ID32STA
	Only first 10 entries are displayed. Click here to see all.

API® ID32STA:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	Ornithine decarboxylaseODC	Esculin hydrolysisESC	Fermentation of D-glucoseGLU	Fermentation of D-fructoseFRU	Fermentation of D-mannoseMNE	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of trehaloseTRE	Fermentation of D-mannitolMAN	Fermentation of raffinoseRAF	Fermentation of D-riboseRIB	Fermentation of cellobioseCEL	Reduction of nitrateNIT	Acetoin production (Voges Proskauer test)VP	beta-Galactosidasebeta GAL	L-arginine arylamidaseArgA	Alkaline phosphatasePAL	Pyrrolidonyl arylamidasePyrA	Novobiocin resistanceNOVO	Fermentation of sucroseSAC	Fermentation of N-acetyl-glucosamineNAG	Fermentation of turanoseTUR	Fermentation of arabinoseARA	beta-Glucuronidasebeta GUR
[Ref.: #20831]	6291	+	-	-	-	+	+	-	+	+	-	-	-	-	+	+	+	-	-	+	-	-	+	+	-	-	-
[Ref.: #20831]	6132	+	-	-	-	+	+	-	+	+	+	-	-	-	-	+	+	-	-	+	-	+	+	+/-	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #20831]	Sample type/isolated from	human patient, blood culture
[Ref.: #20831]	Geographic location (country and/or sea, region)	Giessen
[Ref.: #20831]	Country	Germany
[Ref.: #20831]	Country ISO 3 Code	DEU
[Ref.: #20831]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Infection	#Patient	-
#Infection	#Patient	#Blood culture
#Host	#Human	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #20831]	Pathogenicity (human)	yes
[Ref.: #20831]	Pathogenicity (animal)	yes
[Ref.: #20831]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Availability in culture collections External links

[Ref.: #20831]

Culture collection no.

DSM 28765

[Ref.: #88435]

SI-ID 399942

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20831

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28765

#68375

Automatically annotated from API ID32STA .

#88435

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID399942.1 )

* These data were automatically processed and therefore are not curated

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