Staphylococcus epidermidis (CIP 105810, 98179)

Name: Staphylococcus epidermidis (CIP 105810, 98179)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 135501

Type strain

Strain Designation 98179

Culture col. no. CIP 105810 98179

NCBI tax ID(s) 1282

Special Collections CIP

History CIP <- 1998, N. El Sohl, Inst. Pasteur, Paris, France: strain 98179 <- Lannelongue Hosp., Le Plessis Robinson, France

Links

Staphylococcus epidermidis 98179 is a facultative anaerobe, Gram-positive, coccus-shaped bacterium of the family Staphylococcaceae.

Gram-positive coccus-shaped facultative anaerobe Bacteria

Name and taxonomic classification

SI-ID 70245

CIP 105810

@ref 20215

Last LPSN update 2026-05-29 08:38:34

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Staphylococcaceae

Genus Staphylococcus

Species Staphylococcus epidermidis

Full scientific name Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980)

Synonyms (1)

"Albococcus epidermidis"

BacDive ID	Other strains from **Staphylococcus epidermidis** (118)	Type strain
14529	S. epidermidis Fussel, DSM 20044, ATCC 14990, CCM 2124, ... (type strain)
14522	S. epidermidis DSM 1798, ATCC 12228, WDCM 00036, CCUG 21989, ...
14523	S. epidermidis KH 11, DSM 3269, PCM 2479
14524	S. epidermidis V 2, DSM 3270, PCM 2480
14525	S. epidermidis NT 286, DSM 4851
14526	S. epidermidis GH 561, DSM 8913
14527	S. epidermidis 9142, DSM 18857
14528	S. epidermidis DSM 20042, CCM 50, NCTC 9865
14530	S. epidermidis ES1-248, DSM 30556
14531	S. epidermidis ES1-305-8, DSM 30568
14532	S. epidermidis ES2-5a1, DSM 30591
14533	S. epidermidis ES2-W6c1, DSM 30637
14534	S. epidermidis ES2-W8c2, DSM 30647
14535	S. epidermidis W7/6, DSM 30780
14536	S. epidermidis MW14/1, DSM 30804
14537	S. epidermidis E28, DSM 30883
14538	S. epidermidis K2-4, DSM 30905
14539	S. epidermidis K2-5, DSM 30906
14540	S. epidermidis K2-15, DSM 30916
14541	S. epidermidis K2-17, DSM 30918
23292	S. epidermidis an-1PO b), DSM 30934
23293	S. epidermidis an-2PO b), DSM 30936
24584	S. epidermidis RP62a, BM 3577, DSM 28319, ATCC 35984, CECT ...
24585	S. epidermidis EDCC 5130, DSM 28764
24586	S. epidermidis EDCC 5245, DSM 28765
24587	S. epidermidis A6.1, DSM 30971
130692	S. epidermidis A10_1, DSM 31011
135279	S. epidermidis Am MS 205, CIP 103563, ATCC 49134
135901	S. epidermidis CIP 53.124, ATCC 9491, LMG 13655, NCIMB 8558
136498	S. epidermidis M7, CIP 106299
136534	S. epidermidis RP12, CIP 106510, ATCC 35983, CCUG 44858
137001	S. epidermidis 5, CIP 109562
137002	S. epidermidis 444, CIP 109563
139594	S. epidermidis AmMS 242, CIP 103627, ATCC 49461
139775	S. epidermidis C3_5, DSM 103867
141343	S. epidermidis CCUG 1134
141416	S. epidermidis CCUG 1621
141552	S. epidermidis CCUG 2903
141614	S. epidermidis CCUG 3709, NCTC 6513
141645	S. epidermidis CCUG 4317, NCTC 10519
142146	S. epidermidis CCUG 11027
144134	S. epidermidis CCUG 23118
144916	S. epidermidis CCUG 27072
146980	S. epidermidis CCUG 32590
147458	S. epidermidis CCUG 33609
147826	S. epidermidis CCUG 34325
148342	S. epidermidis CCUG 35257
148575	S. epidermidis CCUG 35659
148977	S. epidermidis CCUG 36670
149012	S. epidermidis CCUG 36722
149057	S. epidermidis CCUG 36797
149246	S. epidermidis CCUG 37337
149313	S. epidermidis CCUG 37477
149329	S. epidermidis CCUG 37526
149330	S. epidermidis CCUG 37527
151012	S. epidermidis CCUG 43038
151446	S. epidermidis CCUG 44090
151477	S. epidermidis CCUG 44126
151492	S. epidermidis CCUG 44145
151497	S. epidermidis CCUG 44153
151791	S. epidermidis CCUG 44887
151822	S. epidermidis CCUG 44987
151823	S. epidermidis CCUG 44988
151824	S. epidermidis CCUG 44989
152233	S. epidermidis CCUG 46178
152270	S. epidermidis CCUG 46277 A
153105	S. epidermidis CCUG 48503
153881	S. epidermidis CCUG 51492
154060	S. epidermidis CCUG 52189
154404	S. epidermidis CCUG 53416
154506	S. epidermidis CCUG 53940
154843	S. epidermidis CCUG 55381
154926	S. epidermidis CCUG 55736
154933	S. epidermidis CCUG 55770
155446	S. epidermidis CCUG 57787 A
155489	S. epidermidis CCUG 57876
155555	S. epidermidis CCUG 58138
156144	S. epidermidis CCUG 60536
156297	S. epidermidis CCUG 61091
156333	S. epidermidis CCUG 61199
156369	S. epidermidis CCUG 61325
156546	S. epidermidis CCUG 62645
156547	S. epidermidis CCUG 62646
156759	S. epidermidis CCUG 64928
156760	S. epidermidis CCUG 64929
156812	S. epidermidis CCUG 65538
157873	S. epidermidis 6aTB_T2, DSM 103953
157874	S. epidermidis 6bT_T3, DSM 103954
157875	S. epidermidis 8aTB_T5, DSM 103968
157876	S. epidermidis 8bTC_T9, DSM 103984
157877	S. epidermidis BV212, DSM 108968
159055	S. epidermidis McC-251-APC-2A, DSM 106280
159056	S. epidermidis Fh040319_T1, DSM 109734
159057	S. epidermidis Fh040319_T2, DSM 109735
159058	S. epidermidis T_T3, DSM 110314
159059	S. epidermidis TO-T2, DSM 110961
159060	S. epidermidis TO-T3b, DSM 110990
160180	S. epidermidis SK1-1-2, DSM 24889
164575	S. epidermidis JCM 33475
165297	S. epidermidis JCM 5692
165298	S. epidermidis JCM 5693
172696	S. epidermidis O-47, CRBIP19.266
172697	S. epidermidis BM94314, CH845, CRBIP19.267
172698	S. epidermidis BM12026, CRBIP21.16
172699	S. epidermidis BM12925, CRBIP21.23
172700	S. epidermidis CRBIP21.25, IPF 19
172701	S. epidermidis CRBIP21.26, IPF 20
172702	S. epidermidis CRBIP21.27, IPF 118
172703	S. epidermidis CRBIP21.28, IPF 257
172704	S. epidermidis CRBIP21.30, IPF 449
172705	S. epidermidis CRBIP21.31, IPF 542
172706	S. epidermidis BM9887, CRBIP21.6
172707	S. epidermidis BM9377, CRBIP21.70
172708	S. epidermidis BM9400, CRBIP21.71
172709	S. epidermidis BM9419, CRBIP21.72
174644	S. epidermidis b06378, DSM 117681
174645	S. epidermidis v11608, DSM 117682
179133	S. epidermidis IMET 10845, STI10845

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
34637	positive	coccus-shaped

Colony morphology

34637

Hemolysis ability1

Culture and growth conditions

Culture medium

@ref	Name	Composition	Medium link
34637	MEDIUM 3 - Columbia agar	Columbia agar (39.000 g);distilled water (1000.000 ml)
34637	CIP Medium 72		Medium recipe at CIP
34637	CIP Medium 3		Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
34637	positive	growth	37
34637	positive	growth	22-41
34637	negative	growth	10
34637	negative	growth	45

Physiology and metabolism

Oxygen tolerance

34637

Oxygen tolerancefacultative anaerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
34637	606565 ChEBI	hippurate	+	hydrolysis
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
34637	17632 ChEBI	nitrate	+	reduction
34637	16301 ChEBI	nitrite	-	reduction
68371	0 ChEBI	Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371	0 ChEBI	Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	+	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
34637	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
34637	15688 ChEBI	acetoin	+

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
34637	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
34637	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
34637	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
34637	caseinase	+	3.4.21.50
34637	catalase	+	1.11.1.6
34637	coagulase	-
68382	cystine arylamidase	-	3.4.11.3	from API zym
34637	DNase	+
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
34637	gamma-glutamyltransferase	-	2.3.2.2
34637	gelatinase	+/-
34637	lecithinase	+
68382	leucine arylamidase	-	3.4.11.1	from API zym
34637	lipase	+
68382	lipase (C 14)	-		from API zym
34637	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
34637	ornithine decarboxylase	-	4.1.1.17
34637	oxidase	-
34637	phenylalanine ammonia-lyase	-	4.3.1.24
34637	protease	+
68382	trypsin	-	3.4.21.4	from API zym
34637	tween esterase	+
34637	urease	+	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
34637	-	+	+	+	-	-	-	-	-	-	+	+	-	-	-	+	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
34637	not determinedn.d.	+	-	-	-	+/-	-	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	+	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
34637	not determinedn.d.	+	+	-	-	-	-	-	+	-	+	+	+	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
34637			Le Plessis-Robinson	France	FRA	Europe
34637	Human, Pericarditic drain	Homo sapiens	Le Plessis Robinson	France	FRA	Europe	1998

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
34637	1	Risk group (French classification)

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#34637	Collection of Institut Pasteur ; Curators of the CIP; CIP 105810
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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