Name: Staphylococcus epidermidis EDCC 5130
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 24585

Type strain:

Species: Staphylococcus epidermidis

Strain Designation: EDCC 5130

Culture col. no.: DSM 28764

Strain history: <- E. Domann; EDCC 5130 <- E. Domann, Justus-Liebig-Universität, Giessen, Germany; EDCC 5130

NCBI tax ID(s): 1282 (species)

SI-ID 398036

DSM 28764

Special Collections

DSMZ
DZIF

Other strains from Staphylococcus epidermidis

Section

Staphylococcus epidermidis EDCC 5130 is a human pathogen that has multiple antibiotic resistances and was isolated from human patient, skin.

antibiotic resistance
human pathogen
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Staphylococcaceae*
	Genus	*Staphylococcus*
	Species	**Staphylococcus epidermidis**
	Full Scientific Name (LPSN)	Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980)

Synonym

"Albococcus epidermidis"

Information on morphological and physiological properties Morphology

[Ref.: #20830]	Type of hemolysis	gamma
[Ref.: #20830]	Incubation period	1-2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #20830]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #20830]

Culture medium growth

[Ref.: #20830]

Culture medium link

Medium recipe at MediaDive

[Ref.: #20830]

Culture medium composition

expand / minimize

[Ref.: #20830]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #20830]

Culture medium growth

[Ref.: #20830]

Culture medium link

Medium recipe at MediaDive

[Ref.: #20830]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #20830]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

Note that the displayed test results represent raw data and therefore may deviate!

Antibiotic susceptibility testing

Test 1

Test 2

Test 3

Reference

[Ref.: #20830]
Mueller-Hinton Agar
37
1
aerob
yes
Inhibition zone diameter in mm
14-16
12-14
22
24
22
40
32-34
28
resistant0
48-50
32
32
6
20
22
resistant0
resistant0
14
12
6
resistant0
32
26
12
resistant0
14
30
20
resistant0
34-36
26
42
resistant0
32
20
28

[Ref.: #20830]
M 92
37

aerob
yes
Inhibition zone diameter in mm
12
resistant0
12-14
12-14
18
32
22
6
resistant0
14
32
32
resistant0
16
22
resistant0
resistant0
14
10-12
resistant0
resistant0
34-36
20
10-12
resistant0
12
34-36
8
resistant0
38
26
42
resistant0
36-38
18
22-24

[Ref.: #20830]
Mueller-Hinton Agar
37

aerob
yes
Inhibition zone diameter in mm
12
resistant0
16
18
18
34
24
14-16
resistant0
14
32-34
32-34
6
14
22-24
resistant0
resistant0
14
12
resistant0
resistant0
34
20
12
resistant0
10
34
8
resistant0
36
26
42-44
resistant0
36
20
24

Only first 15 entries are displayed. Click here to see all.

[Ref.: #20830]

Observation

MRSA

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68375]	arabinose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	arginine ChEBI	-	hydrolysis	* from API ID32STA
[Ref.: #68375]	cellobiose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	D-fructose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	D-glucose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	D-mannitol ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	D-ribose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	esculin ChEBI	-	hydrolysis	* from API ID32STA
[Ref.: #68375]	lactose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	maltose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	nitrate ChEBI	+	reduction	* from API ID32STA
[Ref.: #68375]	ornithine ChEBI	-	degradation	* from API ID32STA
[Ref.: #68375]	raffinose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	sucrose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	trehalose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	urea ChEBI	+	hydrolysis	* from API ID32STA
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68375]		acetoin ChEBI	yes	* from API ID32STA

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #68375]		acetoin ChEBI	+	* from API ID32STA

	Enzyme	Enzyme activity	EC number
[Ref.: #68375]	alkaline phosphatase	+	3.1.3.1	* from API ID32STA
[Ref.: #68375]	arginine dihydrolase	-	3.5.3.6	* from API ID32STA
[Ref.: #68375]	beta-galactosidase	-	3.2.1.23	* from API ID32STA
[Ref.: #68375]	beta-glucosidase	-	3.2.1.21	* from API ID32STA
[Ref.: #68375]	beta-glucuronidase	-	3.2.1.31	* from API ID32STA
[Ref.: #20830]	catalase	+	1.11.1.6
[Ref.: #20830]	cytochrome-c oxidase	-	1.9.3.1
[Ref.: #68375]	L-arginine arylamidase	-		* from API ID32STA
[Ref.: #68375]	ornithine decarboxylase	-	4.1.1.17	* from API ID32STA
[Ref.: #68375]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API ID32STA
[Ref.: #68375]	urease	+	3.5.1.5	* from API ID32STA
	Only first 10 entries are displayed. Click here to see all.

API® ID32STA:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	Ornithine decarboxylaseODC	Esculin hydrolysisESC	Fermentation of D-glucoseGLU	Fermentation of D-fructoseFRU	Fermentation of D-mannoseMNE	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of trehaloseTRE	Fermentation of D-mannitolMAN	Fermentation of raffinoseRAF	Fermentation of D-riboseRIB	Fermentation of cellobioseCEL	Reduction of nitrateNIT	Acetoin production (Voges Proskauer test)VP	beta-Galactosidasebeta GAL	L-arginine arylamidaseArgA	Alkaline phosphatasePAL	Pyrrolidonyl arylamidasePyrA	Novobiocin resistanceNOVO	Fermentation of sucroseSAC	Fermentation of N-acetyl-glucosamineNAG	Fermentation of turanoseTUR	Fermentation of arabinoseARA	beta-Glucuronidasebeta GUR
[Ref.: #20830]	6290	+	-	-	-	+	+	-	+	+	-	-	-	-	-	+	+	-	-	+	-	-	+	-	-	-	-
[Ref.: #20830]	6187	+	-	-	-	+	+	+	+	+	-	-	-	-	-	+	+	-	-	+	-	+	+	-	+	-	-
[Ref.: #20830]	6131	+	-	-	-	+	+	+	+	+	-	-	-	-	-	+	+	-	-	+	-	+/-	+	+/-	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #20830]	Sample type/isolated from	human patient, skin
[Ref.: #20830]	Geographic location (country and/or sea, region)	Giessen
[Ref.: #20830]	Country	Germany
[Ref.: #20830]	Country ISO 3 Code	DEU
[Ref.: #20830]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Infection	#Patient	-
#Host	#Human	-
#Host Body-Site	#Organ	#Skin, Nail, Hair

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #20830]	Pathogenicity (human)	yes
[Ref.: #20830]	Pathogenicity (animal)	yes
[Ref.: #20830]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Availability in culture collections External links

[Ref.: #20830]

Culture collection no.

DSM 28764

[Ref.: #88434]

SI-ID 398036

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20830

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28764

#68375

Automatically annotated from API ID32STA .

#88434

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398036.1 )

* These data were automatically processed and therefore are not curated

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