Staphylococcus epidermidis (CRBIP19.266, O-47)

Name: Staphylococcus epidermidis (CRBIP19.266, O-47)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 172696

Type strain

Strain Designation O-47

Culture col. no. CRBIP19.266 O-47

NCBI tax ID(s) 1282

History CIP <- 2007, JM. Ghigo, Institut Pasteur, Paris, France: strain O-47 <- J. Valle

Links

Staphylococcus epidermidis O-47 is a Gram-positive, coccus-shaped bacterium of the family Staphylococcaceae.

Gram-positive coccus-shaped Bacteria

Name and taxonomic classification

SI-ID 373913

CRBIP19.266

@ref 20215

Last LPSN update 2026-05-29 08:47:22

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Staphylococcaceae

Genus Staphylococcus

Species Staphylococcus epidermidis

Full scientific name Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980)

Synonyms (1)

"Albococcus epidermidis"

BacDive ID	Other strains from **Staphylococcus epidermidis** (118)	Type strain
14529	S. epidermidis Fussel, DSM 20044, ATCC 14990, CCM 2124, ... (type strain)
14522	S. epidermidis DSM 1798, ATCC 12228, WDCM 00036, CCUG 21989, ...
14523	S. epidermidis KH 11, DSM 3269, PCM 2479
14524	S. epidermidis V 2, DSM 3270, PCM 2480
14525	S. epidermidis NT 286, DSM 4851
14526	S. epidermidis GH 561, DSM 8913
14527	S. epidermidis 9142, DSM 18857
14528	S. epidermidis DSM 20042, CCM 50, NCTC 9865
14530	S. epidermidis ES1-248, DSM 30556
14531	S. epidermidis ES1-305-8, DSM 30568
14532	S. epidermidis ES2-5a1, DSM 30591
14533	S. epidermidis ES2-W6c1, DSM 30637
14534	S. epidermidis ES2-W8c2, DSM 30647
14535	S. epidermidis W7/6, DSM 30780
14536	S. epidermidis MW14/1, DSM 30804
14537	S. epidermidis E28, DSM 30883
14538	S. epidermidis K2-4, DSM 30905
14539	S. epidermidis K2-5, DSM 30906
14540	S. epidermidis K2-15, DSM 30916
14541	S. epidermidis K2-17, DSM 30918
23292	S. epidermidis an-1PO b), DSM 30934
23293	S. epidermidis an-2PO b), DSM 30936
24584	S. epidermidis RP62a, BM 3577, DSM 28319, ATCC 35984, CECT ...
24585	S. epidermidis EDCC 5130, DSM 28764
24586	S. epidermidis EDCC 5245, DSM 28765
24587	S. epidermidis A6.1, DSM 30971
130692	S. epidermidis A10_1, DSM 31011
135279	S. epidermidis Am MS 205, CIP 103563, ATCC 49134
135501	S. epidermidis 98179, CIP 105810
135901	S. epidermidis CIP 53.124, ATCC 9491, LMG 13655, NCIMB 8558
136498	S. epidermidis M7, CIP 106299
136534	S. epidermidis RP12, CIP 106510, ATCC 35983, CCUG 44858
137001	S. epidermidis 5, CIP 109562
137002	S. epidermidis 444, CIP 109563
139594	S. epidermidis AmMS 242, CIP 103627, ATCC 49461
139775	S. epidermidis C3_5, DSM 103867
141343	S. epidermidis CCUG 1134
141416	S. epidermidis CCUG 1621
141552	S. epidermidis CCUG 2903
141614	S. epidermidis CCUG 3709, NCTC 6513
141645	S. epidermidis CCUG 4317, NCTC 10519
142146	S. epidermidis CCUG 11027
144134	S. epidermidis CCUG 23118
144916	S. epidermidis CCUG 27072
146980	S. epidermidis CCUG 32590
147458	S. epidermidis CCUG 33609
147826	S. epidermidis CCUG 34325
148342	S. epidermidis CCUG 35257
148575	S. epidermidis CCUG 35659
148977	S. epidermidis CCUG 36670
149012	S. epidermidis CCUG 36722
149057	S. epidermidis CCUG 36797
149246	S. epidermidis CCUG 37337
149313	S. epidermidis CCUG 37477
149329	S. epidermidis CCUG 37526
149330	S. epidermidis CCUG 37527
151012	S. epidermidis CCUG 43038
151446	S. epidermidis CCUG 44090
151477	S. epidermidis CCUG 44126
151492	S. epidermidis CCUG 44145
151497	S. epidermidis CCUG 44153
151791	S. epidermidis CCUG 44887
151822	S. epidermidis CCUG 44987
151823	S. epidermidis CCUG 44988
151824	S. epidermidis CCUG 44989
152233	S. epidermidis CCUG 46178
152270	S. epidermidis CCUG 46277 A
153105	S. epidermidis CCUG 48503
153881	S. epidermidis CCUG 51492
154060	S. epidermidis CCUG 52189
154404	S. epidermidis CCUG 53416
154506	S. epidermidis CCUG 53940
154843	S. epidermidis CCUG 55381
154926	S. epidermidis CCUG 55736
154933	S. epidermidis CCUG 55770
155446	S. epidermidis CCUG 57787 A
155489	S. epidermidis CCUG 57876
155555	S. epidermidis CCUG 58138
156144	S. epidermidis CCUG 60536
156297	S. epidermidis CCUG 61091
156333	S. epidermidis CCUG 61199
156369	S. epidermidis CCUG 61325
156546	S. epidermidis CCUG 62645
156547	S. epidermidis CCUG 62646
156759	S. epidermidis CCUG 64928
156760	S. epidermidis CCUG 64929
156812	S. epidermidis CCUG 65538
157873	S. epidermidis 6aTB_T2, DSM 103953
157874	S. epidermidis 6bT_T3, DSM 103954
157875	S. epidermidis 8aTB_T5, DSM 103968
157876	S. epidermidis 8bTC_T9, DSM 103984
157877	S. epidermidis BV212, DSM 108968
159055	S. epidermidis McC-251-APC-2A, DSM 106280
159056	S. epidermidis Fh040319_T1, DSM 109734
159057	S. epidermidis Fh040319_T2, DSM 109735
159058	S. epidermidis T_T3, DSM 110314
159059	S. epidermidis TO-T2, DSM 110961
159060	S. epidermidis TO-T3b, DSM 110990
160180	S. epidermidis SK1-1-2, DSM 24889
164575	S. epidermidis JCM 33475
165297	S. epidermidis JCM 5692
165298	S. epidermidis JCM 5693
172697	S. epidermidis BM94314, CH845, CRBIP19.267
172698	S. epidermidis BM12026, CRBIP21.16
172699	S. epidermidis BM12925, CRBIP21.23
172700	S. epidermidis CRBIP21.25, IPF 19
172701	S. epidermidis CRBIP21.26, IPF 20
172702	S. epidermidis CRBIP21.27, IPF 118
172703	S. epidermidis CRBIP21.28, IPF 257
172704	S. epidermidis CRBIP21.30, IPF 449
172705	S. epidermidis CRBIP21.31, IPF 542
172706	S. epidermidis BM9887, CRBIP21.6
172707	S. epidermidis BM9377, CRBIP21.70
172708	S. epidermidis BM9400, CRBIP21.71
172709	S. epidermidis BM9419, CRBIP21.72
174644	S. epidermidis b06378, DSM 117681
174645	S. epidermidis v11608, DSM 117682
179133	S. epidermidis IMET 10845, STI10845

Morphology

Cell morphology

@ref	Gram stain	Cell shape
119091	positive	coccus-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link
119091	Luria-Bertani Medium
119091	CIP Medium 368		Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
119091	positive	growth	37

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68378	29016 ChEBI	arginine	+	hydrolysis	from API STA
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
68368	16947 ChEBI	citrate	-	assimilation	from API 20E
68378	15824 ChEBI	D-fructose	+	builds acid from	from API STA
68378	17634 ChEBI	D-glucose	+	builds acid from	from API STA
68368	17634 ChEBI	D-glucose	-	fermentation	from API 20E
68378	16899 ChEBI	D-mannitol	-	builds acid from	from API STA
68378	16024 ChEBI	D-mannose	+	builds acid from	from API STA
68378	65327 ChEBI	D-xylose	-	builds acid from	from API STA
68368	5291 ChEBI	gelatin	-	hydrolysis	from API 20E
68368	62345 ChEBI	L-rhamnose	-	fermentation	from API 20E
68378	17716 ChEBI	lactose	+	builds acid from	from API STA
68368	25094 ChEBI	lysine	-	degradation	from API 20E
68378	17306 ChEBI	maltose	+	builds acid from	from API STA
68378	28053 ChEBI	melibiose	-	builds acid from	from API STA
68368	28053 ChEBI	melibiose	-	fermentation	from API 20E
68378	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API STA
68368	17268 ChEBI	myo-inositol	-	fermentation	from API 20E
68378	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API STA
68378	17632 ChEBI	nitrate	+	reduction	from API STA
68368	17632 ChEBI	nitrate	-	reduction	from API 20E
68368	18257 ChEBI	ornithine	-	degradation	from API 20E
68378	16634 ChEBI	raffinose	-	builds acid from	from API STA
68368	30911 ChEBI	sorbitol	-	fermentation	from API 20E
68378	17992 ChEBI	sucrose	+	builds acid from	from API STA
68368	17992 ChEBI	sucrose	-	fermentation	from API 20E
68378	27082 ChEBI	trehalose	-	builds acid from	from API STA
68368	27897 ChEBI	tryptophan	-	energy source	from API 20E
68378	16199 ChEBI	urea	-	hydrolysis	from API STA
68368	16199 ChEBI	urea	-	hydrolysis	from API 20E
68378	17151 ChEBI	xylitol	-	builds acid from	from API STA

Metabolite production

@ref	Chebi-ID	Metabolite
68378	15688 ChEBI	acetoin	from API STA
68368	15688 ChEBI	acetoin	from API 20E
68368	17997 ChEBI	dinitrogen	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
68368	35581 ChEBI	indole	from API 20E
68368	16301 ChEBI	nitrite	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Indole test
68378	15688 ChEBI	acetoin	+		from API STA
68368	15688 ChEBI	acetoin	-		from API 20E
68368	35581 ChEBI	indole		-	from API 20E

Enzymes

@ref	Value	Activity	Ec
68378	alkaline phosphatase	+	3.1.3.1	from API STA
68378	arginine dihydrolase	+	3.5.3.6	from API STA
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
68368	beta-galactosidase	-	3.2.1.23	from API 20E
68368	gelatinase	-		from API 20E
68368	lysine decarboxylase	-	4.1.1.18	from API 20E
68368	ornithine decarboxylase	-	4.1.1.17	from API 20E
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
68378	urease	-	3.5.1.5	from API STA
68368	urease	-	3.5.1.5	from API 20E

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
119091	-	-	-	-	-	-	-	-	-	-	-	-	not determinedn.d.	-	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API STA

@ref	Control	GLU	FRU	MNE	MAL	LAC	TRE	MAN	XLT	MEL	Reduction of nitrateNIT	PAL	Acetoin production (Voges Proskauer test)VP	RAF	XYL	SAC	Acid from methyl-alpha-D-glucopyranosideMDG	NAG	ADH	URE	LSTR
119091	not determinedn.d.	+	+	+	+	+	-	-	-	-	+	+	+	-	-	+	-	-	+	-	not determinedn.d.

Isolation, sampling and environmental information

Isolation

@ref	Country	Country ISO 3 Code	Continent
119091	Germany	DEU	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
119091	1	Risk group (French classification)

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#68368	Automatically annotated from API 20E .
#68378	Automatically annotated from API STA .
#119091	Collection of Institut Pasteur ; Curators of the CIP; CRBIP19.266
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us