Strain identifier

BacDive ID: 172696

Type strain: No

Species: Staphylococcus epidermidis

Strain Designation: O-47

Strain history: CIP <- 2007, JM. Ghigo, Institut Pasteur, Paris, France: strain O-47 <- J. Valle

NCBI tax ID(s): 1282 (species)

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General

@ref: 119091

BacDive-ID: 172696

keywords: Bacteria, Gram-positive, coccus-shaped

description: Staphylococcus epidermidis O-47 is a Gram-positive, coccus-shaped bacterium of the family Staphylococcaceae.

NCBI tax id

  • NCBI tax id: 1282
  • Matching level: species

strain history

  • @ref: 119091
  • history: CIP <- 2007, JM. Ghigo, Institut Pasteur, Paris, France: strain O-47 <- J. Valle

doi: 10.13145/bacdive172696.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Staphylococcaceae
  • genus: Staphylococcus
  • species: Staphylococcus epidermidis
  • full scientific name: Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Albococcus epidermidis

@ref: 119091

domain: Bacteria

phylum: Bacillota

class: Bacilli

order: Caryophanales

family: Staphylococcaceae

genus: Staphylococcus

species: Staphylococcus epidermidis

strain designation: O-47

type strain: no

Morphology

cell morphology

  • @ref: 119091
  • gram stain: positive
  • cell shape: coccus-shaped

Culture and growth conditions

culture medium

@refnamegrowthlink
119091Luria-Bertani Mediumyes
119091CIP Medium 368yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=368

culture temp

  • @ref: 119091
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836817632nitrate-reduction
6836828053melibiose-fermentation
6836817992sucrose-fermentation
6836862345L-rhamnose-fermentation
6836830911sorbitol-fermentation
6836817268myo-inositol-fermentation
6836817634D-glucose-fermentation
683685291gelatin-hydrolysis
6836827897tryptophan-energy source
6836816199urea-hydrolysis
6836816947citrate-assimilation
6836818257ornithine-degradation
6836825094lysine-degradation
6836829016arginine-hydrolysis
6837817634D-glucose+builds acid from
6837815824D-fructose+builds acid from
6837816024D-mannose+builds acid from
6837817306maltose+builds acid from
6837817716lactose+builds acid from
6837827082trehalose-builds acid from
6837816899D-mannitol-builds acid from
6837817151xylitol-builds acid from
6837828053melibiose-builds acid from
6837817632nitrate+reduction
6837816634raffinose-builds acid from
6837865327D-xylose-builds acid from
6837817992sucrose+builds acid from
68378320061methyl alpha-D-glucopyranoside-builds acid from
6837859640N-acetylglucosamine-builds acid from
6837829016arginine+hydrolysis
6837816199urea-hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6837815688acetoinyes
6836817997dinitrogenno
6836816301nitriteno
6836815688acetoinno
6836835581indoleno
6836816136hydrogen sulfideno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testindole test
6837815688acetoin+
6836815688acetoin-
6836835581indole-

enzymes

@refvalueactivityec
68378urease-3.5.1.5
68378arginine dihydrolase+3.5.3.6
68378alkaline phosphatase+3.1.3.1
68368gelatinase-
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase-4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase-3.5.3.6
68368beta-galactosidase-3.2.1.23

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUINOSorRHASACMELNO2N2
119091-------------------

API STA

@refGLUFRUMNEMALLACTREMANXLTMELNITPALVPRAFXYLSACMDGNAGADHURE
119091+++++----+++--+--+-

Isolation, sampling and environmental information

isolation

  • @ref: 119091
  • country: Germany
  • origin.country: DEU
  • continent: Europe

Safety information

risk assessment

  • @ref: 119091
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 119091

culture collection no.: CRBIP19.266

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
68368Automatically annotated from API 20E
68378Automatically annotated from API STA
119091Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CRBIP19.266Collection of Institut Pasteur (CRBIP19.266)