Staphylococcus epidermidis (CCUG 58138)

Name: Staphylococcus epidermidis (CCUG 58138)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 155555

Type strain

Culture col. no. CCUG 58138

NCBI tax ID(s) 1282

Special Collections CCUG

Links

Staphylococcus epidermidis CCUG 58138 is an anaerobe bacterium that was isolated from Human tissue,64-yr-old woman.

anaerobe Bacteria

Name and taxonomic classification

SI-ID 409162

CCUG 58138

@ref 20215

Last LPSN update 2026-05-29 08:43:18

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Staphylococcaceae

Genus Staphylococcus

Species Staphylococcus epidermidis

Full scientific name Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980)

Synonyms (1)

"Albococcus epidermidis"

BacDive ID	Other strains from **Staphylococcus epidermidis** (118)	Type strain
14529	S. epidermidis Fussel, DSM 20044, ATCC 14990, CCM 2124, ... (type strain)
14522	S. epidermidis DSM 1798, ATCC 12228, WDCM 00036, CCUG 21989, ...
14523	S. epidermidis KH 11, DSM 3269, PCM 2479
14524	S. epidermidis V 2, DSM 3270, PCM 2480
14525	S. epidermidis NT 286, DSM 4851
14526	S. epidermidis GH 561, DSM 8913
14527	S. epidermidis 9142, DSM 18857
14528	S. epidermidis DSM 20042, CCM 50, NCTC 9865
14530	S. epidermidis ES1-248, DSM 30556
14531	S. epidermidis ES1-305-8, DSM 30568
14532	S. epidermidis ES2-5a1, DSM 30591
14533	S. epidermidis ES2-W6c1, DSM 30637
14534	S. epidermidis ES2-W8c2, DSM 30647
14535	S. epidermidis W7/6, DSM 30780
14536	S. epidermidis MW14/1, DSM 30804
14537	S. epidermidis E28, DSM 30883
14538	S. epidermidis K2-4, DSM 30905
14539	S. epidermidis K2-5, DSM 30906
14540	S. epidermidis K2-15, DSM 30916
14541	S. epidermidis K2-17, DSM 30918
23292	S. epidermidis an-1PO b), DSM 30934
23293	S. epidermidis an-2PO b), DSM 30936
24584	S. epidermidis RP62a, BM 3577, DSM 28319, ATCC 35984, CECT ...
24585	S. epidermidis EDCC 5130, DSM 28764
24586	S. epidermidis EDCC 5245, DSM 28765
24587	S. epidermidis A6.1, DSM 30971
130692	S. epidermidis A10_1, DSM 31011
135279	S. epidermidis Am MS 205, CIP 103563, ATCC 49134
135501	S. epidermidis 98179, CIP 105810
135901	S. epidermidis CIP 53.124, ATCC 9491, LMG 13655, NCIMB 8558
136498	S. epidermidis M7, CIP 106299
136534	S. epidermidis RP12, CIP 106510, ATCC 35983, CCUG 44858
137001	S. epidermidis 5, CIP 109562
137002	S. epidermidis 444, CIP 109563
139594	S. epidermidis AmMS 242, CIP 103627, ATCC 49461
139775	S. epidermidis C3_5, DSM 103867
141343	S. epidermidis CCUG 1134
141416	S. epidermidis CCUG 1621
141552	S. epidermidis CCUG 2903
141614	S. epidermidis CCUG 3709, NCTC 6513
141645	S. epidermidis CCUG 4317, NCTC 10519
142146	S. epidermidis CCUG 11027
144134	S. epidermidis CCUG 23118
144916	S. epidermidis CCUG 27072
146980	S. epidermidis CCUG 32590
147458	S. epidermidis CCUG 33609
147826	S. epidermidis CCUG 34325
148342	S. epidermidis CCUG 35257
148575	S. epidermidis CCUG 35659
148977	S. epidermidis CCUG 36670
149012	S. epidermidis CCUG 36722
149057	S. epidermidis CCUG 36797
149246	S. epidermidis CCUG 37337
149313	S. epidermidis CCUG 37477
149329	S. epidermidis CCUG 37526
149330	S. epidermidis CCUG 37527
151012	S. epidermidis CCUG 43038
151446	S. epidermidis CCUG 44090
151477	S. epidermidis CCUG 44126
151492	S. epidermidis CCUG 44145
151497	S. epidermidis CCUG 44153
151791	S. epidermidis CCUG 44887
151822	S. epidermidis CCUG 44987
151823	S. epidermidis CCUG 44988
151824	S. epidermidis CCUG 44989
152233	S. epidermidis CCUG 46178
152270	S. epidermidis CCUG 46277 A
153105	S. epidermidis CCUG 48503
153881	S. epidermidis CCUG 51492
154060	S. epidermidis CCUG 52189
154404	S. epidermidis CCUG 53416
154506	S. epidermidis CCUG 53940
154843	S. epidermidis CCUG 55381
154926	S. epidermidis CCUG 55736
154933	S. epidermidis CCUG 55770
155446	S. epidermidis CCUG 57787 A
155489	S. epidermidis CCUG 57876
156144	S. epidermidis CCUG 60536
156297	S. epidermidis CCUG 61091
156333	S. epidermidis CCUG 61199
156369	S. epidermidis CCUG 61325
156546	S. epidermidis CCUG 62645
156547	S. epidermidis CCUG 62646
156759	S. epidermidis CCUG 64928
156760	S. epidermidis CCUG 64929
156812	S. epidermidis CCUG 65538
157873	S. epidermidis 6aTB_T2, DSM 103953
157874	S. epidermidis 6bT_T3, DSM 103954
157875	S. epidermidis 8aTB_T5, DSM 103968
157876	S. epidermidis 8bTC_T9, DSM 103984
157877	S. epidermidis BV212, DSM 108968
159055	S. epidermidis McC-251-APC-2A, DSM 106280
159056	S. epidermidis Fh040319_T1, DSM 109734
159057	S. epidermidis Fh040319_T2, DSM 109735
159058	S. epidermidis T_T3, DSM 110314
159059	S. epidermidis TO-T2, DSM 110961
159060	S. epidermidis TO-T3b, DSM 110990
160180	S. epidermidis SK1-1-2, DSM 24889
164575	S. epidermidis JCM 33475
165297	S. epidermidis JCM 5692
165298	S. epidermidis JCM 5693
172696	S. epidermidis O-47, CRBIP19.266
172697	S. epidermidis BM94314, CH845, CRBIP19.267
172698	S. epidermidis BM12026, CRBIP21.16
172699	S. epidermidis BM12925, CRBIP21.23
172700	S. epidermidis CRBIP21.25, IPF 19
172701	S. epidermidis CRBIP21.26, IPF 20
172702	S. epidermidis CRBIP21.27, IPF 118
172703	S. epidermidis CRBIP21.28, IPF 257
172704	S. epidermidis CRBIP21.30, IPF 449
172705	S. epidermidis CRBIP21.31, IPF 542
172706	S. epidermidis BM9887, CRBIP21.6
172707	S. epidermidis BM9377, CRBIP21.70
172708	S. epidermidis BM9400, CRBIP21.71
172709	S. epidermidis BM9419, CRBIP21.72
174644	S. epidermidis b06378, DSM 117681
174645	S. epidermidis v11608, DSM 117682
179133	S. epidermidis IMET 10845, STI10845

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
61606	positive	growth	37

Physiology and metabolism

Oxygen tolerance

61606

Oxygen toleranceanaerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68381	40585 ChEBI	alpha-cyclodextrin	-	builds acid from	from API rID32STR
68375	22599 ChEBI	arabinose	-	fermentation	from API ID32STA
68380	29016 ChEBI	arginine	+	hydrolysis	from API rID32A
68375	29016 ChEBI	arginine	+	hydrolysis	from API ID32STA
68381	29016 ChEBI	arginine	+	hydrolysis	from API rID32STR
68375	17057 ChEBI	cellobiose	-	fermentation	from API ID32STA
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68375	15824 ChEBI	D-fructose	+	fermentation	from API ID32STA
68375	17634 ChEBI	D-glucose	-	fermentation	from API ID32STA
68375	16899 ChEBI	D-mannitol	-	fermentation	from API ID32STA
68381	16899 ChEBI	D-mannitol	-	builds acid from	from API rID32STR
68380	16024 ChEBI	D-mannose	+	fermentation	from API rID32A
68375	16024 ChEBI	D-mannose	-	fermentation	from API ID32STA
68375	16988 ChEBI	D-ribose	-	fermentation	from API ID32STA
68381	16988 ChEBI	D-ribose	-	builds acid from	from API rID32STR
68381	16443 ChEBI	D-tagatose	-	builds acid from	from API rID32STR
68375	4853 ChEBI	esculin	-	hydrolysis	from API ID32STA
68381	28087 ChEBI	glycogen	-	builds acid from	from API rID32STR
68381	606565 ChEBI	hippurate	-	hydrolysis	from API rID32STR
68381	30849 ChEBI	L-arabinose	-	builds acid from	from API rID32STR
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68375	17716 ChEBI	lactose	+	fermentation	from API ID32STA
68381	17716 ChEBI	lactose	-	builds acid from	from API rID32STR
68375	17306 ChEBI	maltose	+	fermentation	from API ID32STA
68381	17306 ChEBI	maltose	-	builds acid from	from API rID32STR
68381	6731 ChEBI	melezitose	-	builds acid from	from API rID32STR
68381	28053 ChEBI	melibiose	-	builds acid from	from API rID32STR
68381	320055 ChEBI	methyl beta-D-glucopyranoside	-	builds acid from	from API rID32STR
68375	59640 ChEBI	N-acetylglucosamine	-	fermentation	from API ID32STA
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
68375	17632 ChEBI	nitrate	+	reduction	from API ID32STA
68375	18257 ChEBI	ornithine	-	degradation	from API ID32STA
68381	27941 ChEBI	pullulan	-	builds acid from	from API rID32STR
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68375	16634 ChEBI	raffinose	-	fermentation	from API ID32STA
68381	16634 ChEBI	raffinose	-	builds acid from	from API rID32STR
68381	30911 ChEBI	sorbitol	-	builds acid from	from API rID32STR
68375	17992 ChEBI	sucrose	+	fermentation	from API ID32STA
68381	17992 ChEBI	sucrose	+	builds acid from	from API rID32STR
68375	27082 ChEBI	trehalose	-	fermentation	from API ID32STA
68381	27082 ChEBI	trehalose	-	builds acid from	from API rID32STR
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68375	32528 ChEBI	turanose	-	fermentation	from API ID32STA
68380	16199 ChEBI	urea	+	hydrolysis	from API rID32A
68375	16199 ChEBI	urea	+	hydrolysis	from API ID32STA
68381	16199 ChEBI	urea	+	hydrolysis	from API rID32STR

Antibiotic resistance

@ref	ChEBI	Group ID	Metabolite	Is sensitive	Sensitivity conc.
68375	28368	0	novobiocin		1.8 µg	from API ID32STA

Metabolite production

@ref	Chebi-ID	Metabolite
68375	15688 ChEBI	acetoin	from API ID32STA
68381	15688 ChEBI	acetoin	from API rID32STR
68380	35581 ChEBI	indole	from API rID32A

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Indole test
68381	15688 ChEBI	acetoin	+		from API rID32STR
68375	15688 ChEBI	acetoin	+		from API ID32STA
68380	35581 ChEBI	indole		-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68380	alanine arylamidase	-	3.4.11.2	from API rID32A
68381	Alanyl-Phenylalanyl-Proline arylamidase	-		from API rID32STR
68381	alkaline phosphatase	+	3.1.3.1	from API rID32STR
68380	alkaline phosphatase	+	3.1.3.1	from API rID32A
68375	alkaline phosphatase	+	3.1.3.1	from API ID32STA
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
68381	alpha-galactosidase	-	3.2.1.22	from API rID32STR
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68380	alpha-glucosidase	+	3.2.1.20	from API rID32A
68381	arginine dihydrolase	+	3.5.3.6	from API rID32STR
68380	arginine dihydrolase	+	3.5.3.6	from API rID32A
68375	arginine dihydrolase	+	3.5.3.6	from API ID32STA
68381	beta-galactosidase	-	3.2.1.23	from API rID32STR
68380	beta-galactosidase	-	3.2.1.23	from API rID32A
68375	beta-galactosidase	-	3.2.1.23	from API ID32STA
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68381	beta-glucosidase	-	3.2.1.21	from API rID32STR
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
68375	beta-glucosidase	-	3.2.1.21	from API ID32STA
68381	beta-glucuronidase	-	3.2.1.31	from API rID32STR
68375	beta-glucuronidase	-	3.2.1.31	from API ID32STA
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68381	beta-mannosidase	-	3.2.1.25	from API rID32STR
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	-		from API rID32A
68381	glycyl tryptophan arylamidase	-		from API rID32STR
68380	histidine arylamidase	-		from API rID32A
68375	L-arginine arylamidase	-		from API ID32STA
68380	L-arginine arylamidase	-		from API rID32A
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	-	3.4.11.1	from API rID32A
68381	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32STR
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68375	ornithine decarboxylase	-	4.1.1.17	from API ID32STA
68380	phenylalanine arylamidase	-		from API rID32A
68380	proline-arylamidase	-	3.4.11.5	from API rID32A
68381	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32STR
68375	pyrrolidonyl arylamidase	-	3.4.19.3	from API ID32STA
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	-		from API rID32A
68381	urease	+	3.5.1.5	from API rID32STR
68375	urease	+	3.5.1.5	from API ID32STA
68380	urease	+	3.5.1.5	from API rID32A

Fatty acid profile

Metadata FA analysis

@ref

61606

Fatty acid	Percentage	ECL
C15:0 ANTEISO	22.1	14.711
C18:0	14	18
C16:0	10.1	16
C15:0 ISO	8	14.621
C20:0	6.4	20
C14:0	6.2	14
C18:2 ω6,9c/C18:0 ANTE	5	17.724
C13:0 iso	4.9	12.612
C19:0	4.2	19
C18:1 ω9c	4.2	17.769
C15:0	3.9	15
C14:0 ISO	3.2	13.618
C17:0	2.4	17
C13:0 ANTEISO	1.8	12.701
C20:1 ω9c	1.4	19.77
C13:0	1.3	13
C20:2 ω6,9c	1	19.735

API ID32STA

@ref	URE	ADH (Arg)	ODC	ESC	GLU	FRU	MNE	MAL	LAC	TRE	MAN	RAF	RIB	CEL	Reduction of nitrateNIT	Acetoin production (Voges Proskauer test)VP	beta GAL	L-arginine arylamidaseArgA	PAL	Pyrrolidonyl arylamidasePyrA	NOVO	SAC	NAG	TUR	ARA	beta GUR
61606	+	+	-	-	-	+	-	+	+	-	-	-	-	-	+	+	-	-	+	-	-	+	-	-	-	-

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
61606	+	+	-	-	-	+	-	-	-	-	+	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
61606	+	-	-	-	-	+	-	-	-	-	-	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	#Female
#Infection	#Patient	-

Isolation

@ref	Sample type	Host species	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
61606	Human tissue,64-yr-old woman	Homo sapiens	2009-04-30	Göteborg	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#61606	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 58138
#68375	Automatically annotated from API ID32STA .
#68380	Automatically annotated from API rID32A .
#68381	Automatically annotated from API rID32STR .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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