Name: Ligilactobacillus salivarius WCA-383-APC-5E
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 158986

Type strain:

Species: Ligilactobacillus salivarius

Strain Designation: WCA-383-APC-5E

Culture col. no.: DSM 105842

Strain history: <- T. Clavel , TU Munich, Freising-Weihenstephan, Germany; WCA-383-APC-5E

NCBI tax ID(s): 1624 (species)

SI-ID 400279

DSM 105842

Special Collections

Other strains from Ligilactobacillus salivarius

Section

Ligilactobacillus salivarius WCA-383-APC-5E is a bacterium that was isolated from feces; pig, 5 month old, genotype: APC1311/+ referring to the adenomatous-polyposis-coli protein.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Ligilactobacillus*
	Species	**Ligilactobacillus salivarius**
	Full Scientific Name (LPSN)	Ligilactobacillus salivarius (Rogosa et al. 1953) Zheng et al. 2020

	Synonym	Lactobacillus salivarius subsp. salicinius
	Synonym	Lactobacillus salivarius

Information on culture and growth conditions Culture and growth conditions

[Ref.: #65809]

Culture medium

MRS MEDIUM (DSMZ Medium 11)

[Ref.: #65809]

Culture medium growth

[Ref.: #65809]

Culture medium link

Medium recipe at MediaDive

[Ref.: #65809]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #65809]			growth	37 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #65809]	Sample type/isolated from	feces; pig, 5 month old, genotype: APC1311/+ referring to the adenomatous-polyposis-coli (APC) protein
[Ref.: #65809]	Geographic location (country and/or sea, region)	Munich
[Ref.: #65809]	Country	Germany
[Ref.: #65809]	Country ISO 3 Code	DEU
[Ref.: #65809]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Host	#Mammals	#Suidae (Pig,Swine)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence MN537500 (>99% sequence identity) for Lactobacillus from Microbeatlas

Aquatic Samples	4168
Soil Samples	4210
Animal Samples	87492
Plant Samples	1545
Total Samples	97415

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #65809]	Lactobacillus sp. strain DSM 105842 16S ribosomal RNA gene, partial sequence	MN537500	1491	GenBank ENA	1591 tax ID

Availability in culture collections External links

[Ref.: #65809]

Culture collection no.

DSM 105842

[Ref.: #111502]

SI-ID 400279

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65809

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105842

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#111502

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400279.1 )

* These data were automatically processed and therefore are not curated

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Search for species Ligilactobacillus salivarius in external resources:
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