Name: Lactococcus lactis 117
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 14699

Type strain:

Species: Lactococcus lactis

Strain Designation: 117

Culture col. no.: DSM 20175, ATCC 15577, CCUG 21962, NRRL B-4449, LMG 7760, JCM 1158, CECT 984, NCFB 2738, NRIC 1074, JCM 20312, IAM 10070, CIP 102975, NCDO 2738

Strain history: CIP <- 1987, NCFB <- 1984, DSM <- ATCC <- K. Kitahara: strain 117, Lactobacillus xylosus

NCBI tax ID(s): 1358 (species)

SI-ID 125702

LMG 7760, ATCC 15577, CCUG 21962, JCM 1158, NCFB 2738, NRRL B-4449, CIP 102975, NCDO 2738, NCIMB 702738, CECT 984, VTT E-82169, KCTC 3514, IAM 10070, JCM 20312, DSM 20175

Special Collections

Other strains from Lactococcus lactis

Section

Lactococcus lactis 117 is a human pathogen that was isolated from "Anchu" mash.

human pathogen
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Streptococcaceae*
	Genus	*Lactococcus*
	Species	**Lactococcus lactis**
	Full Scientific Name (LPSN)	Lactococcus lactis (Lister 1873) Schleifer et al. 1986

	Synonym	Streptococcus lactis
	Synonym	"Bacterium* lactis"*
	Synonym	Lactobacillus xylosus
	Synonym	Streptococcus lactis subsp. diacetilactis

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %93.898

[Ref.: #69480]	Motility	no Confidence in %92

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8605]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #8605]

Culture medium growth

[Ref.: #8605]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8605]

Culture medium composition

expand / minimize

[Ref.: #38748]

Culture medium

MEDIUM 40- for Lactobacillus and Leuconostoc

[Ref.: #38748]

Culture medium growth

[Ref.: #38748]

Culture medium composition

expand / minimize

[Ref.: #120527]

Culture medium

CIP Medium 40

[Ref.: #120527]

Culture medium growth

[Ref.: #120527]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #8605]	growth	30 °C
[Ref.: #38748]	growth	30 °C
[Ref.: #67770]	growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #8605]	Murein short key	A11.31
[Ref.: #8605]	Murein types	A4alpha L-Lys-D-Asp

[Ref.: #67770]

Observation

quinones: MK-9, MK-8

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68381]	alpha-cyclodextrin ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	arginine ChEBI	+	hydrolysis	* from API rID32STR
[Ref.: #68381]	D-arabitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	D-mannitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	D-ribose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	D-tagatose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	glycogen ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	hippurate ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #68381]	L-arabinose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	lactose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	maltose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	melezitose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	melibiose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	methyl beta-D-glucopyranoside ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	pullulan ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	raffinose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	sorbitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	sucrose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	trehalose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	urea ChEBI	-	hydrolysis	* from API rID32STR
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68381]		acetoin ChEBI	yes	* from API rID32STR

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #68381]		acetoin ChEBI	+	* from API rID32STR

	Enzyme	Enzyme activity	EC number
[Ref.: #68381]	Alanyl-Phenylalanyl-Proline arylamidase	-		* from API rID32STR
[Ref.: #68381]	alpha-galactosidase	-	3.2.1.22	* from API rID32STR
[Ref.: #68381]	arginine dihydrolase	+	3.5.3.6	* from API rID32STR
[Ref.: #68381]	beta-galactosidase	-	3.2.1.23	* from API rID32STR
[Ref.: #68381]	beta-glucosidase	+	3.2.1.21	* from API rID32STR
[Ref.: #68381]	beta-glucuronidase	-	3.2.1.31	* from API rID32STR
[Ref.: #68381]	glycyl tryptophan arylamidase	-		* from API rID32STR
[Ref.: #68381]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32STR
[Ref.: #68381]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32STR
[Ref.: #68381]	urease	-	3.5.1.5	* from API rID32STR

API® rID32STR:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Arginine dihydrolaseADH (Arg)	beta-Glucosidasebeta GLU	beta-Galactosidasebeta GAR	beta-Glucuronidasebeta GUR	alpha-Galactosidasealpha GAL	Alkaline PhosphatasePAL	Acid from D-riboseRIB	Acid from D-mannitolMAN	Acid from sorbitolSOR	Acid from lactoseLAC	Acid from trehaloseTRE	Acid from raffinoseRAF	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta-Galactosidasebeta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	Hydrolysis of hippuric acidHIP	Acid from glycogenGLYG	Acid from pullulanPUL	Acid from maltoseMAL	Acid from melibioseMEL	Acid from melezitoseMLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	Acid from D-tagatoseTAG	beta-Mannosidasebeta MAN	Urease/urea hydrolysisURE
[Ref.: #8605]	10665	+	+	-	-	-	+/-	-	-	-	-	+	-	+	-	-	+	+	-	-	-	-	-	-	-	-	+	-	-	+	-	+/-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8605]	Sample type/isolated from	"Anchu" mash

[Ref.: #67770]	Sample type/isolated from	Anchu mash

[Ref.: #120527]	Sample type/isolated from	Environment, Anchu mash
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence LC311732 (>99% sequence identity) for Lactococcus from Microbeatlas

Aquatic Samples	13841
Soil Samples	7135
Animal Samples	132033
Plant Samples	4677
Total Samples	157686

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8605]	Pathogenicity (human)	yes, in single cases
[Ref.: #8605]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120527]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Lactococcus lactis subsp. lactis gene for 16S ribosomal RNA, partial sequence, strain: JCM 1158	LC153549	1485	GenBank ENA	1360 tax ID
[Ref.: #67770]	Lactococcus lactis subsp. lactis gene for 16S ribosomal RNA, partial sequence, strain: JCM 20312	LC311732	1483	GenBank ENA	1360 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Lactococcus lactis subsp. lactis LMG 7760	GCA_001437565	scaffold	GenBank ENA	1360 tax ID	*
[Ref.: #66792]	Lactococcus lactis subsp. lactis strain LMG 7760	1360.94	wgs	PATRIC	1360 tax ID	*
[Ref.: #66792]	Lactococcus lactis lactis LMG 7760	2663763414	draft	JGI IMG/M	1360 tax ID	*

[Ref.: #8605]	GC-content	39.4 mol%
[Ref.: #67770]	GC-content	39.4 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Lactococcus lactis subsp. lactis LMG 7760 NCBI: GCA_001437565.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	93.898	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	90.77	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	95.309	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	85.606	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	98.5	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	92	no

Availability in culture collections External links

[Ref.: #8605]

Culture collection no.

DSM 20175, ATCC 15577, CCUG 21962, NRRL B-4449, LMG 7760, JCM 1158, CECT 984, NCFB 2738, NRIC 1074, JCM 20312, IAM 10070, CIP 102975, NCDO 2738

[Ref.: #83818]

SI-ID 125702

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Genetic evidence for a defective xylan degradation pathway in Lactococcus lactis.	Erlandson KA, Delamarre SC, Batt CA	Appl Environ Microbiol	10.1128/AEM.67.4.1445-1452.2001	2001	*

References

#8605

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20175

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#38748 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68381

Automatically annotated from API rID32STR .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#83818

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID125702.1 )

#120527 Collection of Institut Pasteur ; Curators of the CIP; CIP 102975
* These data were automatically processed and therefore are not curated

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Lactococcus lactis subsp. lactis LMG 7760

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