Name: Acetobacter pasteurianus A35
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 135988

Type strain:

Species: Acetobacter pasteurianus

Strain Designation: A35

Culture col. no.: CIP 103001, IAM 1811, IFO 3299, JCM 20274, LMG 1553, NBRC 3299

Strain history: CIP <- 1986, IAM <- T. Asai: strain A35 <- K. Kondo, Japan: strain 63 Acetobacter ascendens

NCBI tax ID(s): 1226665 (strain), 438 (species)

SI-ID 14573

LMG 1553, IAM 1811, IFO 3299, CIP 103001, NBRC 3299, JCM 20274

Special Collections

Other strains from Acetobacter pasteurianus

Section

Acetobacter pasteurianus A35 is a Gram-negative bacterium that was isolated from Spoiled beer.

Gram-negative
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Acetobacteraceae*
	Genus	*Acetobacter*
	Species	**Acetobacter pasteurianus**
	Full Scientific Name (LPSN)	Acetobacter pasteurianus (Hansen 1879) Beijerinck and Folpmers 1916 (Approved Lists 1980)

	Synonym	"Bacterium* ascendens"*
	Synonym	Acetobacter ascendens
	Synonym	Acetobacter pasteurianus subsp. paradoxus
	Synonym	Acetobacter peroxydans
	Synonym	"Mycoderma* pasteurianum"*
	Synonym	"Acetobacter* paradoxus"*
	Synonym	"Acetobacter* paradoxum"*
	Synonym	Acetobacter pasteurianus subsp. ascendens

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %96.333

Information on culture and growth conditions Culture and growth conditions

[Ref.: #35281]

Culture medium

MEDIUM 1 - for Acetobacter, Azotobacter, Gluconobacter, Gluconacetobacter, Mesorhizodium ciceri and Pseudomonas doudoroffii

[Ref.: #35281]

Culture medium growth

[Ref.: #35281]

Culture medium composition

expand / minimize

[Ref.: #35281]

Culture medium

CIP Medium 1

[Ref.: #35281]

Culture medium growth

[Ref.: #35281]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #35281]			growth	30 °C
[Ref.: #67770]			growth	25 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]

Ability of spore formation

no Confidence in %100

[Ref.: #67770]

Observation

quinones: Q-9

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Spoiled beer
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB680052 (>99% sequence identity) for Acetobacter from Microbeatlas

Aquatic Samples	1945
Soil Samples	1742
Animal Samples	7743
Plant Samples	937
Total Samples	12367

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #35281]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Acetobacter pasteurianus gene for 16S rRNA, partial sequence, strain: NBRC 3299	AB680052	1414	GenBank ENA	438 tax ID
[Ref.: #124043]	Acetobacter pasteurianus 16S rRNA, partial sequence.	AB003972	155	GenBank ENA	438 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Acetobacter pasteurianus NBRC 3299	GCA_003850965	contig	GenBank ENA	1226665 tax ID
[Ref.: #66792]	Acetobacter pasteurianus NBRC 3299	1226665.3	wgs	PATRIC	1226665 tax ID	*
[Ref.: #66792]	Acetobacter pasteurianus NBRC 3299	2901799356	draft	JGI IMG/M	438 tax ID	*

[Ref.: #67770]

GC-content

52.6 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Acetobacter pasteurianus NBRC 3299 PATRIC: 1226665.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Acetobacter pasteurianus NBRC 3299 PATRIC: 1226665.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	96.333	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	89.348	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	89.616	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	77.052	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	97.682	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	71.919	no

Availability in culture collections External links

[Ref.: #35281]

Culture collection no.

CIP 103001, IAM 1811, IFO 3299, JCM 20274, LMG 1553, NBRC 3299

[Ref.: #93244]

SI-ID 14573

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#35281 Collection of Institut Pasteur ; Curators of the CIP; CIP 103001

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#93244

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID14573.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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Acetobacter pasteurianus NBRC 3299

Acetobacter pasteurianus NBRC 3299

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