Acetobacter pasteurianus (CIP 103000, IAM 1808, IFO 3188)

Name: Acetobacter pasteurianus (CIP 103000, IAM 1808, IFO 3188)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 135987

Type strain

Culture col. no. CIP 103000 IAM 1808 IFO 3188 NRRL B-56 NBRC 3188 1 more

NCBI tax ID(s) 1226663 438

Special Collections JCM CIP

History JCM <-- IAM 1808 <-- T. Asai A-10 ("Acetobacter ascendens") <-- IFO 3188 <-- NRRL B-56 <-- N. P. Porges. CIP <- 1986, IAM <- T. Asai: strain A10, Acetobacter ascendens

Links

Acetobacter pasteurianus CIP 103000 is a bacterium of the family Acetobacteraceae.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 25

LMG 1556,IAM 1808,IFO 3188,NRRL B-56,CIP 103000,NBRC 3188,BCRC 11420,CCRC 11420,JCM 20273

@ref 20215

Last LPSN update 2026-05-29 08:38:41

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodospirillales

Family Acetobacteraceae

Genus Acetobacter

Species Acetobacter pasteurianus

Full scientific name Acetobacter pasteurianus (Hansen 1879) Beijerinck and Folpmers 1916 (Approved Lists 1980)

Synonyms (8)

Acetobacter pasteurianus subsp. ascendens
"Acetobacter paradoxus"
"Bacterium ascendens"
Acetobacter ascendens
Acetobacter pasteurianus subsp. paradoxus
"Acetobacter paradoxum"
"Mycoderma pasteurianum"
Acetobacter peroxydans

BacDive ID	Other strains from **Acetobacter pasteurianus** (20)	Type strain
4	A. pasteurianus 190, DSM 3509, ATCC 33445, LMD 22.1, JCM ... (type strain)
5	A. pasteurianus Asai A-5, BU 121, Porges 38, A4, DSM 46617, ...
6	A. pasteurianus BU 117, DSM 46618, ATCC 9433, CCM 1774, IFO ...
7	A. pasteurianus BU 343, DSM 46619, ATCC 6439, CCM 1771, IFO ...
24	A. pasteurianus L. 1374, DSM 2347, ATCC 12874, NCIB 8618, ...
25	A. pasteurianus B 4110, DSM 2006, ATCC 838, IAM 14432, NCIB ...
23459	A. pasteurianus AB0220, DSM 25273
135986	A. pasteurianus CIP 102999, IAM 1804, JCM 20270
135988	A. pasteurianus A35, CIP 103001, IAM 1811, IFO 3299, JCM ...
136130	A. pasteurianus CIP 102721, IAM 1826, JCM 20287
140649	A. pasteurianus NBRC 105184, IFO 3283-01
162841	A. pasteurianus JCM 20272, IAM 1807
162906	A. pasteurianus JCM 20384, ATCC 9322, IAM 12073, LMG 1604, ...
163093	A. pasteurianus JCM 21167, ATCC 23758, IAM 14353, LMG 1598, ...
163094	A. pasteurianus JCM 21168, ATCC 23759, IAM 14354, LMG 1601, ...
163095	A. pasteurianus JCM 21171, ATCC 12873, IAM 14358, LMG 1612, ...
163096	A. pasteurianus JCM 21173, ATCC 23756, IAM 14360, LMG 1628, ...
163109	A. pasteurianus JCM 21216, ATCC 9323, IAM 14433, LMD 46.3, ...
163110	A. pasteurianus JCM 21217, ATCC 12879, IAM 14434, LMD 75.2, ...
163301	A. pasteurianus JCM 25075, IFO 13754, NBRC 13754, NCIMB 9015

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	96.333

Culture and growth conditions

Culture medium

@ref	Name	Growth	Composition	Medium link
35280	MEDIUM 1 - for Acetobacter, Azotobacter, Gluconobacter, Gluconacetobacter, Mesorhizodium ciceri and Pseudomonas doudoroffii		Distilled water make up to (1000.000 ml);Agar (15.000 g);Yeast extract (5.000 g);Peptone (3.000 g);Mannitol (25.000 g)
35280	CIP Medium 1			Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
35280	positive	growth	30
67770	positive	growth	25

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		99.352
125438		92.34

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
35280	1	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM385082v1 assembly for Acetobacter pasteurianus NBRC 3188	contig	GCA_003850825	1226663.3	2901802297	1226663	32.14

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
124043	Acetobacter pasteurianus gene for 16S rRNA, partial sequence, strain: NBRC 3188.	AB680025	1413		438

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM385082v1 assembly for Acetobacter pasteurianus NBRC 3188
BV-BRC: 1226663.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	83.23	no
125439	gram_stain	BacteriaNetⓘ	negative	88.46	no
125439	motility	BacteriaNetⓘ	yes	69.85	no
125439	spore_formation	BacteriaNetⓘ	no	99.35	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Acetobacter pasteurianus NBRC 3188
PATRIC: 1226663.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	96.33	no
125438	anaerobic	anaerobicⓘ	no	88.08	no
125438	spore-forming	spore-formingⓘ	no	92.34	no
125438	aerobic	aerobicⓘ	yes	75.00	no
125438	thermophilic	thermophileⓘ	no	95.71	yes
125438	flagellated	motile2+ⓘ	yes	59.40	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Comparative Genomic Analysis of Closely Related Acetobacter pasteurianus Strains Provides Evidence of Horizontal Gene Transfer and Reveals Factors Necessary for Thermotolerance.	Matsutani M, Matsumoto N, Hirakawa H, Shiwa Y, Yoshikawa H, Okamoto-Kainuma A, Ishikawa M, Kataoka N, Yakushi T, Matsushita K.	J Bacteriol	10.1128/jb.00553-19	2020

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#35280	Collection of Institut Pasteur ; Curators of the CIP; CIP 103000
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Acetobacter pasteurianus (CIP 103000, IAM 1808, IFO 3188)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Spore formation

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_003850825

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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