Acetobacter pasteurianus (DSM 46619, ATCC 6439, CCM 1771)

Name: Acetobacter pasteurianus (DSM 46619, ATCC 6439, CCM 1771)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 7

Type strain

Strain Designation BU 343

Culture col. no. DSM 46619 ATCC 6439 CCM 1771 IFO 3222 IMET 10602 10 more

NCBI tax ID(s) 1226664 438

Special Collections DSMZ JCM

History <- IMET <- K. Karbaum (Acetobacter kuetzingianus, CCM 1771) IAM 1817 <-- T. Asai A-6 ("Acetobacter kuetzingainus") <-- IFO 3222 <-- ATCC 6439 <-- A. J. Kluyver.

Links

Acetobacter pasteurianus BU 343 is a mesophilic prokaryote of the family Acetobacteraceae.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 92067

LMG 1577,ATCC 6439,CCM 1771,IAM 1817,IFO 3222,LMG 1593,NCIB 3924,NCTC 3924,DSM 46619,IMET 10602,NCIMB 3924,LMD 39.4,LMD 76.27,LMD 76.18,LMD 29.35,LMD 29.34,NCCB 76027,NCCB 39004,NBRC 3222,BCRC 11079,CCRC 11079,NRRL B-472,JCM 20279

@ref 20215

Last LPSN update 2025-12-16 09:46:45

Domain Pseudomonadati

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodospirillales

Family Acetobacteraceae

Genus Acetobacter

Species Acetobacter pasteurianus

Full scientific name Acetobacter pasteurianus (Hansen 1879) Beijerinck and Folpmers 1916 (Approved Lists 1980)

Synonyms (9)

Acetobacter pasteurianus subsp. ascendens
"Acetobacter paradoxus"
"Acetobacter paradoxum"
"Bacterium ascendens"
Acetobacter ascendens
Acetobacter pasteurianus subsp. paradoxus
Acetobacter ascendens
"Mycoderma pasteurianum"
Acetobacter peroxydans

BacDive ID	Other strains from **Acetobacter pasteurianus** (20)	Type strain
4	A. pasteurianus 190, DSM 3509, ATCC 33445, LMD 22.1, JCM ... (type strain)
5	A. pasteurianus Asai A-5, BU 121, Porges 38, A4, DSM 46617, ...
6	A. pasteurianus BU 117, DSM 46618, ATCC 9433, CCM 1774, IFO ...
24	A. pasteurianus L. 1374, DSM 2347, ATCC 12874, NCIB 8618, ...
25	A. pasteurianus B 4110, DSM 2006, ATCC 838, IAM 14432, NCIB ...
23459	A. pasteurianus AB0220, DSM 25273
135986	A. pasteurianus CIP 102999, IAM 1804, JCM 20270
135987	A. pasteurianus CIP 103000, IAM 1808, IFO 3188, JCM 20273, ...
135988	A. pasteurianus A35, CIP 103001, IAM 1811, IFO 3299, JCM ...
136130	A. pasteurianus CIP 102721, IAM 1826, JCM 20287
140649	A. pasteurianus NBRC 105184, IFO 3283-01
162841	A. pasteurianus JCM 20272, IAM 1807
162906	A. pasteurianus JCM 20384, ATCC 9322, IAM 12073, LMG 1604, ...
163093	A. pasteurianus JCM 21167, ATCC 23758, IAM 14353, LMG 1598, ...
163094	A. pasteurianus JCM 21168, ATCC 23759, IAM 14354, LMG 1601, ...
163095	A. pasteurianus JCM 21171, ATCC 12873, IAM 14358, LMG 1612, ...
163096	A. pasteurianus JCM 21173, ATCC 23756, IAM 14360, LMG 1628, ...
163109	A. pasteurianus JCM 21216, ATCC 9323, IAM 14433, LMD 46.3, ...
163110	A. pasteurianus JCM 21217, ATCC 12879, IAM 14434, LMD 75.2, ...
163301	A. pasteurianus JCM 25075, IFO 13754, NBRC 13754, NCIMB 9015

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	93.9
125438	negative	96

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
12591	YPM MEDIUM (DSMZ Medium 360)		Medium recipe at MediaDive	Name: YPM MEDIUM (DSMZ Medium 360) Composition: Mannitol 25.0 g/l Agar 12.0 g/l Yeast extract 5.0 g/l Peptone 3.0 g/l Distilled water
12591	GLUCONOBACTER OXYDANS MEDIUM (DSMZ Medium 105)		Medium recipe at MediaDive	Name: GLUCONOBACTER OXYDANS MEDIUM (DSMZ Medium 105) Composition: Glucose 100.0 g/l CaCO3 20.0 g/l Agar 15.0 g/l Yeast extract 10.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
12591	positive	growth	28	mesophilic
67770	positive	growth	25	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	92

Spore formation

@ref	Spore formation	Confidence
125439		96.4
125438		92.216

Isolation, sampling and environmental information

Taxonmaps

69479

Global distribution of 16S sequence AB680030 (>99% sequence identity) for Acetobacter from Microbeatlas

Aquatic Samples	1945
Soil Samples	1742
Animal Samples	7743
Plant Samples	937
Total Samples	12367

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
12591	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM385084v1 assembly for Acetobacter pasteurianus NBRC 3222	contig	GCA_003850845	1226664.3	2905218981	1226664	41.12

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Acetobacter pasteurianus gene for 16S rRNA, partial sequence, strain: NBRC 3222	AB680030	1413		438

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Acetobacter pasteurianus NBRC 3222
NCBI: GCA_003850845

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	96.40	no
125439	motility	BacteriaNetⓘ	yes	72.30	no
125439	gram_stain	BacteriaNetⓘ	negative	93.90	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	92.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Acetobacter pasteurianus NBRC 3222
PATRIC: 1226664.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	96.00	no
125438	anaerobic	anaerobicⓘ	no	85.46	no
125438	spore-forming	spore-formingⓘ	no	92.22	no
125438	aerobic	aerobicⓘ	yes	77.88	no
125438	thermophilic	thermophileⓘ	no	98.21	no
125438	flagellated	motile2+ⓘ	no	74.11	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Comparative Genomic Analysis of Closely Related Acetobacter pasteurianus Strains Provides Evidence of Horizontal Gene Transfer and Reveals Factors Necessary for Thermotolerance.	Matsutani M, Matsumoto N, Hirakawa H, Shiwa Y, Yoshikawa H, Okamoto-Kainuma A, Ishikawa M, Kataoka N, Yakushi T, Matsushita K.	J Bacteriol	10.1128/jb.00553-19	2020

References

#12591	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46619
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Acetobacter pasteurianus (DSM 46619, ATCC 6439, CCM 1771)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_003850845

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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