Strain identifier

BacDive ID: 7

Type strain: No

Species: Acetobacter pasteurianus

Strain Designation: BU 343

Strain history: IAM 1817 <-- T. Asai A-6 ("Acetobacter kuetzingainus") <-- IFO 3222 <-- ATCC 6439 <-- A. J. Kluyver.

NCBI tax ID(s): 1226664 (strain), 438 (species)

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General

@ref: 12591

BacDive-ID: 7

DSM-Number: 46619

keywords: genome sequence, 16S sequence, Bacteria, mesophilic, Gram-negative

description: Acetobacter pasteurianus BU 343 is a mesophilic, Gram-negative bacterium of the family Acetobacteraceae.

NCBI tax id

NCBI tax idMatching level
1226664strain
438species

strain history

@refhistory
12591<- IMET <- K. Karbaum (Acetobacter kuetzingianus, CCM 1771)
67770IAM 1817 <-- T. Asai A-6 ("Acetobacter kuetzingainus") <-- IFO 3222 <-- ATCC 6439 <-- A. J. Kluyver.

doi: 10.13145/bacdive7.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Rhodospirillales
  • family: Acetobacteraceae
  • genus: Acetobacter
  • species: Acetobacter pasteurianus
  • full scientific name: Acetobacter pasteurianus (Hansen 1879) Beijerinck and Folpmers 1916 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Bacterium ascendens
    20215Acetobacter ascendens
    20215Acetobacter pasteurianus subsp. paradoxus
    20215Acetobacter peroxydans
    20215Mycoderma pasteurianum
    20215Acetobacter paradoxus
    20215Acetobacter paradoxum
    20215Acetobacter pasteurianus subsp. ascendens

@ref: 12591

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhizobiales

family: Acetobacteraceae

genus: Acetobacter

species: Acetobacter pasteurianus

full scientific name: Acetobacter pasteurianus (Hansen 1879) Beijerinck and Folpmers 1916

strain designation: BU 343

type strain: no

Morphology

cell morphology

  • @ref: 69480
  • gram stain: negative
  • confidence: 99.995

Culture and growth conditions

culture medium

  • @ref: 12591
  • name: GLUCONOBACTER OXYDANS MEDIUM (DSMZ Medium 105)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/105
  • composition: Name: GLUCONOBACTER OXYDANS MEDIUM (DSMZ Medium 105) Composition: Glucose 100.0 g/l CaCO3 20.0 g/l Agar 15.0 g/l Yeast extract 10.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
12591positivegrowth28mesophilic
67770positivegrowth25mesophilic

Physiology and metabolism

spore formation

@refspore formationconfidence
69481no100
69480no99.999

Isolation, sampling and environmental information

taxonmaps

  • @ref: 69479
  • File name: preview.99_214.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_29;96_152;97_163;98_182;99_214&stattab=map
  • Last taxonomy: Acetobacter
  • 16S sequence: AB680030
  • Sequence Identity:
  • Total samples: 12367
  • soil counts: 1742
  • aquatic counts: 1945
  • animal counts: 7743
  • plant counts: 937

Safety information

risk assessment

  • @ref: 12591
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: Acetobacter pasteurianus gene for 16S rRNA, partial sequence, strain: NBRC 3222
  • accession: AB680030
  • length: 1413
  • database: ena
  • NCBI tax ID: 438

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Acetobacter pasteurianus NBRC 32221226664.3wgspatric1226664
66792Acetobacter pasteurianus NBRC 32222905218981draftimg438
67770Acetobacter pasteurianus NBRC 3222GCA_003850845contigncbi1226664

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileno92.144no
gram-positiveno95.842no
anaerobicno98.212no
aerobicyes84.484no
halophileno91.637no
spore-formingno95.146no
thermophileno97.68yes
glucose-utilyes73.823no
flagellatedno97.906no
glucose-fermentno89.404no

External links

@ref: 12591

culture collection no.: DSM 46619, ATCC 6439, CCM 1771, IFO 3222, IMET 10602, Lock 83, NBRC 3222, NCIB 3924, NCTC 3924, JCM 20279, IAM 1817, LMD 39.4, LMG 1577, NCIMB 3924

straininfo link

  • @ref: 69691
  • straininfo: 92067

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
12591Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 46619)https://www.dsmz.de/collection/catalogue/details/culture/DSM-46619
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch10.21203/rs.3.rs-2527258/v1Predictions based on the model GenomeNet Sporulation v. 1
69691Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID92067.1StrainInfo: A central database for resolving microbial strain identifiers