Pseudomonas sp. (DSM 6412, ChinIK)

Name: Pseudomonas sp. (DSM 6412, ChinIK)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 12949

Type strain

Strain Designation ChinIK

Culture col. no. DSM 6412 ChinIK

NCBI tax ID(s) 306

Special Collections DSMZ

Links

ChinIK is a mesophilic prokaryote that was isolated from sewage sludge.

mesophilic

Name and taxonomic classification

SI-ID 48188

DSM 6412

@ref 20215

Last LPSN update 2025-12-16 09:49:58

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Pseudomonas

Full scientific name Pseudomonas Migula 1894 (Approved Lists 1980)

Synonyms (9)

Chryseomonas
Metapseudomonas
Zestomonas
"Caenipseudomonas"
Phytopseudomonas
Ectopseudomonas
Aquipseudomonas
Geopseudomonas
Flavimonas

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
2633	MINERAL MEDIUM WITH QUINOLINE (DSMZ Medium 461a)		Medium recipe at MediaDive	Name: MINERAL MEDIUM WITH QUINOLINE (DSMZ Medium 461a) Composition: Na2HPO4 x 2 H2O 1.31032 g/l MgSO4 x 7 H2O 0.451835 g/l Quinoline 0.272727 g/l NH4Cl 0.271101 g/l KH2PO4 0.225917 g/l NaCl 0.0451835 g/l CaCl2 0.00903669 g/l MnSO4 0.00903669 g/l HCl 0.00225917 g/l FeCl2 x 4 H2O 0.0013555 g/l Pantothenic acid 0.000225917 g/l Vitamin B12 0.000225917 g/l Riboflavin 0.000225917 g/l alpha-lipoic acid 0.000225917 g/l p-Aminobenzoic acid 0.000225917 g/l Thiamine-HCl x 2 H2O 0.000225917 g/l CoCl2 x 6 H2O 0.000171697 g/l Nicotine amide 0.000112959 g/l Nicotinic acid 0.000112959 g/l Biotin 9.03669e-05 g/l Folic acid 9.03669e-05 g/l MnCl2 x 4 H2O 9.03669e-05 g/l ZnCl2 6.32568e-05 g/l Pyridoxamine hydrochloride 4.51834e-05 g/l Na2MoO4 x 2 H2O 3.25321e-05 g/l NiCl2 x 6 H2O 2.16881e-05 g/l H3BO3 5.42201e-06 g/l CuCl2 x 2 H2O 1.80734e-06 g/l Phosphate buffer Distilled water
2633	NUTRIENT AGAR (DSMZ Medium 1)		Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
2633	positive	growth	30	mesophilic

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	+	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	+	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	+	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	+	3.5.3.6	from API 20NE
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68369	gelatinase	-		from API 20NE
68369	urease	-	3.5.1.5	from API 20NE

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
2633	+	-	-	+	-	-	-	-	+	+	+	+	+	-	+	+	-	+	+	+	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Waste	#Sewage sludge

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
2633	sewage sludge	Göttingen	Germany	DEU	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#2633	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6412
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#68369	Automatically annotated from API 20NE .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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