Name: Pseudomonas sp. 39/D
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 12917

Type strain:

Species: Pseudomonas sp.

Strain Designation: 39/D, F39/D

Culture col. no.: DSM 14157, DSM 6414

Strain history: <- R. Parales, Univ. Iowa

NCBI tax ID(s): 306 (species)

SI-ID 49549

DSM 14157, DSM 6414

Special Collections

DSMZ

Other strains from Pseudomonas sp.

Pseudomonas sp. 39/D is a bacterium of the family Pseudomonadaceae.

Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Pseudomonadaceae*
	Genus	*Pseudomonas*
	Full Scientific Name (LPSN)	Pseudomonas Migula 1894 (Approved Lists 1980)

	Synonym	Serpens
	Synonym	Flavimonas
	Synonym	Stutzerimonas

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5235]

Culture medium

MINERAL MEDIUM (BRUNNER) (DSMZ Medium 457)

[Ref.: #5235]

Culture medium growth

[Ref.: #5235]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5235]

Culture medium composition

expand / minimize

[Ref.: #5235]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #5235]

Culture medium growth

[Ref.: #5235]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5235]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5235]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #5235]	Name of produced compound	cis 1,2-dihydroxycyclohexa-3,5-diene
[Ref.: #5235]	Name of produced compound	cis toluene dihydrodiol

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	arginine ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68369]	D-mannitol ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-mannose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	esculin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gluconate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	nitrate ChEBI	-	reduction	* from API 20NE
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]	urea ChEBI	-	hydrolysis	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68369]		indole ChEBI	-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68369]	arginine dihydrolase	+	3.5.3.6	* from API 20NE
[Ref.: #68369]	beta-glucosidase	-	3.2.1.21	* from API 20NE
[Ref.: #68369]	cytochrome oxidase	+	1.9.3.1	* from API 20NE
[Ref.: #68369]	gelatinase	-		* from API 20NE
[Ref.: #68369]	urease	-	3.5.1.5	* from API 20NE

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #5235]	22869	-	-	-	+	-	-	-	-	+	-	+	-	-	-	+	+	-	+	+	+	+

Availability in culture collections External links

[Ref.: #5235]

Culture collection no.

DSM 14157, DSM 6414

[Ref.: #82130]

SI-ID 49549

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Biotransformation of various substituted aromatic compounds to chiral dihydrodihydroxy derivatives.	Raschke H, Meier M, Burken JG, Hany R, Muller MD, Van Der Meer JR, Kohler HP	Appl Environ Microbiol	10.1128/AEM.67.8.3333-3339.2001	2001	*
Metabolism	Oxidation of 6,7-dihydro-5H-benzocycloheptene by bacterial strains expressing naphthalene dioxygenase, biphenyl dioxygenase, and toluene dioxygenase yields homochiral monol or cis-diol enantiomers as major products.	Resnick SM, Gibson DT	Appl Environ Microbiol	10.1128/aem.62.4.1364-1368.1996	1996	*
Metabolism	Desaturation and oxygenation of 1,2-dihydronaphthalene by toluene and naphthalene dioxygenase.	Torok DS, Resnick SM, Brand JM, Cruden DL, Gibson DT	J Bacteriol	10.1128/jb.177.20.5799-5805.1995	1995	*
Metabolism	Regiospecific and stereoselective hydroxylation of 1-indanone and 2-indanone by naphthalene dioxygenase and toluene dioxygenase.	Resnick SM, Torok DS, Lee K, Brand JM, Gibson DT	Appl Environ Microbiol	10.1128/aem.60.9.3323-3328.1994	1994	*
Enzymology	Oxidation of 2-methoxynaphthalene by toluene, naphthalene and biphenyl dioxygenases:structure and absolute stereochemistry of metabolites.	Whited GM, Downie JC, Hudlicky T, Fearnley SP, Dudding TC, Olivo HF, Parker D	Bioorg Med Chem	10.1016/0968-0896(94)85024-0	1994	*
Metabolism	Oxidation of carbazole to 3-hydroxycarbazole by naphthalene 1,2-dioxygenase and biphenyl 2,3-dioxygenase.	Resnick SM, Torok DS, Gibson DT	FEMS Microbiol Lett	10.1111/j.1574-6968.1993.tb06530.x	1993	*

References

#5235

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14157

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#68369

Automatically annotated from API 20NE .

#82130

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID49549.1 )

* These data were automatically processed and therefore are not curated

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