Pseudomonas sp. (DSM 14157, 39/D, DSM 6414)

Name: Pseudomonas sp. (DSM 14157, 39/D, DSM 6414)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 12917

Type strain

Strain Designation 39/D, F39/D

Culture col. no. DSM 14157 39/D DSM 6414 F39/D

NCBI tax ID(s) 306

Special Collections DSMZ

History DSMZ <- R. Parales, Univ. Iowa

Links

39/D is a bacterium of the family Pseudomonadaceae.

Bacteria

Name and taxonomic classification

SI-ID 49549

DSM 14157,DSM 6414

@ref 20215

Last LPSN update 2026-05-29 08:27:55

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Pseudomonas

Full scientific name Pseudomonas Migula 1894 (Approved Lists 1980)

Synonyms (9)

Metapseudomonas
Zestomonas
"Caenipseudomonas"
Phytopseudomonas
Ectopseudomonas
Aquipseudomonas
Geopseudomonas
Flavimonas
Chryseomonas

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
5235	MINERAL MEDIUM (BRUNNER) (DSMZ Medium 457)		Medium recipe at MediaDive	Name: MINERAL MEDIUM (BRUNNER) (DSMZ Medium 457) Composition: Na2HPO4 2.44 g/l KH2PO4 1.52 g/l (NH4)2SO4 0.5 g/l MgSO4 x 7 H2O 0.2 g/l CaCl2 x 2 H2O 0.05 g/l EDTA 0.005 g/l FeSO4 x 7 H2O 0.002 g/l H3BO3 0.0003 g/l CoCl2 x 6 H2O 0.0002 g/l ZnSO4 x 7 H2O 0.0001 g/l MnCl2 x 4 H2O 3e-05 g/l Na2MoO4 x 2 H2O 3e-05 g/l NiCl2 x 6 H2O 2e-05 g/l CuCl2 x 2 H2O 1e-05 g/l Distilled water
5235	NUTRIENT AGAR (DSMZ Medium 1)		Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
5235	positive	growth	30

Physiology and metabolism

Compound production

@ref	Compound
5235	cis 1,2-dihydroxycyclohexa-3,5-diene
5235	cis toluene dihydrodiol

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	+	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	+	3.5.3.6	from API 20NE
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68369	gelatinase	-		from API 20NE
68369	urease	-	3.5.1.5	from API 20NE

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
5235	-	-	-	+	-	-	-	-	+	-	+	-	-	-	+	+	-	+	+	+	+

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Biotransformation of various substituted aromatic compounds to chiral dihydrodihydroxy derivatives.	Raschke H, Meier M, Burken JG, Hany R, Muller MD, Van Der Meer JR, Kohler HP	Appl Environ Microbiol	10.1128/AEM.67.8.3333-3339.2001	2001
Metabolism	Oxidation of 6,7-dihydro-5H-benzocycloheptene by bacterial strains expressing naphthalene dioxygenase, biphenyl dioxygenase, and toluene dioxygenase yields homochiral monol or cis-diol enantiomers as major products.	Resnick SM, Gibson DT	Appl Environ Microbiol	10.1128/aem.62.4.1364-1368.1996	1996
Metabolism	Desaturation and oxygenation of 1,2-dihydronaphthalene by toluene and naphthalene dioxygenase.	Torok DS, Resnick SM, Brand JM, Cruden DL, Gibson DT	J Bacteriol	10.1128/jb.177.20.5799-5805.1995	1995
Metabolism	Regiospecific and stereoselective hydroxylation of 1-indanone and 2-indanone by naphthalene dioxygenase and toluene dioxygenase.	Resnick SM, Torok DS, Lee K, Brand JM, Gibson DT	Appl Environ Microbiol	10.1128/aem.60.9.3323-3328.1994	1994
Enzymology	Oxidation of 2-methoxynaphthalene by toluene, naphthalene and biphenyl dioxygenases:structure and absolute stereochemistry of metabolites.	Whited GM, Downie JC, Hudlicky T, Fearnley SP, Dudding TC, Olivo HF, Parker D	Bioorg Med Chem	10.1016/0968-0896(94)85024-0	1994
Metabolism	Oxidation of carbazole to 3-hydroxycarbazole by naphthalene 1,2-dioxygenase and biphenyl 2,3-dioxygenase.	Resnick SM, Torok DS, Gibson DT	FEMS Microbiol Lett	10.1111/j.1574-6968.1993.tb06530.x	1993

References

#5235	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14157
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#68369	Automatically annotated from API 20NE .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pseudomonas sp. (DSM 14157, 39/D, DSM 6414)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Compound production

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20NE

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome-based predictions

Literature

Literature

References

BacDive

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