Levilactobacillus brevis 269Y is a mesophilic prokaryote that was isolated from green fermenting Sevillano variety olives.
mesophilic genome sequence 16S sequence| @ref 20215 |
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| Domain Bacteria |
| Phylum Bacillota |
| Class Bacilli |
| Order Lactobacillales |
| Family Lactobacillaceae |
| Genus Levilactobacillus |
| Species Levilactobacillus brevis |
| Full scientific name Levilactobacillus brevis (Orla-Jensen 1919) Zheng et al. 2020 |
| Synonyms (2) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 8906 | MRS MEDIUM (DSMZ Medium 11) | Medium recipe at MediaDive | Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water |
| @ref | Oxygen tolerance | Confidence | |
|---|---|---|---|
| 125439 | obligate aerobe | 96 |
| 8906 | Compoundmaltose phosphorylase |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 8906 | A11.31 | A4alpha L-Lys-D-Asp |
| 67770 | ObservationAssay of Cytosine and uracil |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68381 | 40585 ChEBI | alpha-cyclodextrin | - | builds acid from | from API rID32STR |
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68381 | 29016 ChEBI | arginine | + | hydrolysis | from API rID32STR |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68381 | 18333 ChEBI | D-arabitol | - | builds acid from | from API rID32STR |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68381 | 16899 ChEBI | D-mannitol | - | builds acid from | from API rID32STR |
| 68371 | 16024 ChEBI | D-mannose | - | builds acid from | from API 50CH acid |
| 68381 | 16988 ChEBI | D-ribose | + | builds acid from | from API rID32STR |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68381 | 16443 ChEBI | D-tagatose | - | builds acid from | from API rID32STR |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | + | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68381 | 28087 ChEBI | glycogen | - | builds acid from | from API rID32STR |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68381 | 606565 ChEBI | hippurate | + | hydrolysis | from API rID32STR |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | + | builds acid from | from API 50CH acid |
| 68381 | 30849 ChEBI | L-arabinose | - | builds acid from | from API rID32STR |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68381 | 17716 ChEBI | lactose | - | builds acid from | from API rID32STR |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 68381 | 17306 ChEBI | maltose | - | builds acid from | from API rID32STR |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68381 | 6731 ChEBI | melezitose | - | builds acid from | from API rID32STR |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68381 | 28053 ChEBI | melibiose | + | builds acid from | from API rID32STR |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68381 | 320055 ChEBI | methyl beta-D-glucopyranoside | - | builds acid from | from API rID32STR |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | + | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68381 | 27941 ChEBI | pullulan | - | builds acid from | from API rID32STR |
| 68381 | 16634 ChEBI | raffinose | - | builds acid from | from API rID32STR |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 68381 | 30911 ChEBI | sorbitol | - | builds acid from | from API rID32STR |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 68381 | 17992 ChEBI | sucrose | - | builds acid from | from API rID32STR |
| 68371 | 17992 ChEBI | sucrose | - | builds acid from | from API 50CH acid |
| 68371 | 27082 ChEBI | trehalose | - | builds acid from | from API 50CH acid |
| 68381 | 27082 ChEBI | trehalose | - | builds acid from | from API rID32STR |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68381 | 16199 ChEBI | urea | - | hydrolysis | from API rID32STR |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Chebi-ID | Metabolite | Production | |
|---|---|---|---|---|
| 68381 | 15688 ChEBI | acetoin | from API rID32STR |
| @ref | Chebi-ID | Metabolite | Voges-proskauer-test | |
|---|---|---|---|---|
| 68381 | 15688 ChEBI | acetoin | - | from API rID32STR |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68381 | Alanyl-Phenylalanyl-Proline arylamidase | - | from API rID32STR | |
| 68381 | alkaline phosphatase | - | 3.1.3.1 | from API rID32STR |
| 68381 | alpha-galactosidase | + | 3.2.1.22 | from API rID32STR |
| 68381 | arginine dihydrolase | + | 3.5.3.6 | from API rID32STR |
| 68381 | beta-galactosidase | + | 3.2.1.23 | from API rID32STR |
| 68381 | beta-glucosidase | - | 3.2.1.21 | from API rID32STR |
| 68381 | beta-glucuronidase | + | 3.2.1.31 | from API rID32STR |
| 68381 | beta-mannosidase | - | 3.2.1.25 | from API rID32STR |
| 68381 | glycyl tryptophan arylamidase | - | from API rID32STR | |
| 68381 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32STR |
| 68381 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API rID32STR |
| 68381 | urease | - | 3.5.1.5 | from API rID32STR |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8906 | - | - | - | - | + | + | + | - | - | + | + | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | |
| 8906 | - | - | - | - | + | + | + | - | - | + | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 8906 | - | - | - | - | + | + | + | - | - | + | + | + | + | - | - | - | - | - | + | - | - | + | + | - | - | - | - | - | + | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | + | + |
| @ref | ADH (Arg) | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | Acid from alpha-cyclodextrinCDEX | Acetoin production (Voges Proskauer test)VP | Alanyl-Phenylalanyl-Proline arylamidaseAPPA | beta GAL | Pyrrolidonyl arylamidasePyrA | N-Acetyl-glucosaminidasebeta NAG | Glycyl-tryptophan arylamidaseGTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Acidification of methyl beta-D-glucopyranosideMbeta DG | TAG | beta MAN | URE | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47423 | + | - | - | + | + | - | + | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | + | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | - | - | - | - | - | |
| 47423 | + | - | - | + | + | - | + | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | + | - | - | - | + | - | - | - | - | - |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Engineered | #Food production | #Vegetable (incl. Grains) | |
| #Host Body-Site | #Plant | #Fruit (Seed) | |
| #Engineered | #Food production | #Fermented |
Global distribution of 16S sequence AB680070 (>99% sequence identity) for Levilactobacillus from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | 49888_E01 assembly for Levilactobacillus brevis NCTC13386 | contig | 1580 | 78.61 | ||||
| 67770 | ASM293375v1 assembly for Levilactobacillus brevis NBRC 3345 | contig | 1580 | 70.23 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Lactobacillus brevis gene for 16S rRNA, partial sequence, strain: NBRC 3345 | AB680070 | 1491 | 1580 | ||
| 20218 | Lactobacillus brevis 16S-23S ribosomal RNA intergenic spacer, complete sequence | AY821851 | 214 | 1580 | ||
| 124043 | Lactobacillus brevis gene for 16S rRNA, partial sequence, strain: JCM 1559. | AB289050 | 689 | 1580 |
| 8906 | GC-content (mol%)42.3 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | yes | 66.10 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 60.00 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 85.90 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 96.00 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 93.53 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 83.22 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 85.94 | no |
| 125438 | aerobic | aerobicⓘ | no | 94.33 | no |
| 125438 | thermophilic | thermophileⓘ | no | 96.00 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 90.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Selective utilization of gluco-oligosaccharides by lactobacilli: A mechanism study revealing the impact of glycosidic linkages and degree of polymerization on their utilization. | Zeng M, Oh JH, van Pijkeren JP, Pan X. | J Food Sci | 10.1111/1750-3841.16851 | 2024 | ||
| Probiotic Properties and Antioxidant Activity In Vitro of Lactic Acid Bacteria. | Vougiouklaki D, Tsironi T, Tsantes AG, Tsakali E, Van Impe JFM, Houhoula D. | Microorganisms | 10.3390/microorganisms11051264 | 2023 | ||
| Surface Layer Protein Pattern of Levilactobacillus brevis Strains Investigated by Proteomics. | Mazzeo MF, Reale A, Di Renzo T, Siciliano RA. | Nutrients | 10.3390/nu14183679 | 2022 | ||
| Surface layer proteins in species of the family Lactobacillaceae. | Palomino MM, Allievi MC, Gordillo TB, Bockor SS, Fina Martin J, Ruzal SM. | Microb Biotechnol | 10.1111/1751-7915.14230 | 2023 | ||
| Immunomodulatory Properties of a gamma-Aminobutyric Acid-Enriched Strawberry Juice Produced by Levilactobacillus brevis CRL 2013. | Cataldo PG, Villena J, Elean M, Savoy de Giori G, Saavedra L, Hebert EM. | Front Microbiol | 10.3389/fmicb.2020.610016 | 2020 | ||
| In Vitro Probiotic Characterization and Safety Assessment of Lactic Acid Bacteria Isolated from Raw Milk of Japanese-Saanen Goat (Capra hircus). | Tanaka Y, Aryantini NPD, Yamasaki E, Saito M, Tsukigase Y, Nakatsuka H, Urashima T, Horiuchi R, Fukuda K. | Animals (Basel) | 10.3390/ani13010007 | 2022 | ||
| Bioluminescent monitoring of recombinant lactic acid bacteria and their products. | Choi IY, Oh J-H, Wang Z, van Pijkeren J-P. | mBio | 10.1128/mbio.01197-23 | 2023 | ||
| Metabolism | Molecular Logic of Prokaryotic Surface Layer Structures. | Bharat TAM, von Kugelgen A, Alva V. | Trends Microbiol | 10.1016/j.tim.2020.09.009 | 2021 | |
| Biotechnology | Discovery and Biotechnological Exploitation of Glycoside-Phosphorylases. | Li A, Benkoulouche M, Ladeveze S, Durand J, Cioci G, Laville E, Potocki-Veronese G. | Int J Mol Sci | 10.3390/ijms23063043 | 2022 | |
| Biomarkers and Utility of the Antioxidant Potential of Probiotic Lactobacilli and Bifidobacteria as Representatives of the Human Gut Microbiota. | Averina OV, Poluektova EU, Marsova MV, Danilenko VN. | Biomedicines | 10.3390/biomedicines9101340 | 2021 | ||
| Lipoteichoic acid mediates binding of a Lactobacillus S-layer protein. | Bonisch E, Oh YJ, Anzengruber J, Hager FF, Lopez-Guzman A, Zayni S, Hinterdorfer P, Kosma P, Messner P, Duda KA, Schaffer C. | Glycobiology | 10.1093/glycob/cwx102 | 2018 | ||
| Development of Tools for Genetic Analysis of Phenanthrene Degradation and Nanopod Production by Delftia sp. Cs1-4. | Chen S, Hickey WJ. | Front Microbiol | 10.3389/fmicb.2011.00187 | 2011 | ||
| Metabolism | GtfA and GtfB are both required for protein O-glycosylation in Lactobacillus plantarum. | Lee IC, van Swam II, Tomita S, Morsomme P, Rolain T, Hols P, Kleerebezem M, Bron PA. | J Bacteriol | 10.1128/jb.01401-13 | 2014 | |
| Biotechnology | Lactobacillus brevis strains from fermented aloe vera survive gastroduodenal environment and suppress common food borne enteropathogens. | Kim YW, Jeong YJ, Kim AY, Son HH, Lee JA, Jung CH, Kim CH, Kim J. | PLoS One | 10.1371/journal.pone.0090866 | 2014 | |
| Pathogenicity | Antibacterial effect of water-soluble chitosan on representative dental pathogens Streptococcus mutans and Lactobacilli brevis. | Chen CY, Chung YC. | J Appl Oral Sci | 10.1590/s1678-77572012000600006 | 2012 | |
| Metabolism | The structure of Lactobacillus brevis surface layer reassembled on liposomes differs from native structure as revealed by SAXS. | Kontro I, Wiedmer SK, Hynonen U, Penttila PA, Palva A, Serimaa R | Biochim Biophys Acta | 10.1016/j.bbamem.2014.04.022 | 2014 | |
| Effect of Lactobacillus brevis ATCC 8287 as a feeding supplement on the performance and immune function of piglets. | Lahteinen T, Lindholm A, Rinttila T, Junnikkala S, Kant R, Pietila TE, Levonen K, von Ossowski I, Solano-Aguilar G, Jakava-Viljanen M, Palva A | Vet Immunol Immunopathol | 10.1016/j.vetimm.2013.09.002 | 2013 | ||
| Metabolism | Characterization and separate activities of the two promoters of the Lactobacillus brevis S-layer protein gene. | Hynonen U, Avall-Jaaskelainen S, Palva A | Appl Microbiol Biotechnol | 10.1007/s00253-010-2500-z | 2010 | |
| Metabolism | Recombinant S-layer proteins of Lactobacillus brevis mediating antibody adhesion to calf intestine alleviated neonatal diarrhea syndrome. | Khang YH, Park HY, Jeong YS, Kim JA, Kim YH | J Microbiol Biotechnol | 10.4014/jmb.0805.325 | 2009 | |
| Metabolism | Surface location of individual residues of SlpA provides insight into the Lactobacillus brevis S-layer. | Vilen H, Hynonen U, Badelt-Lichtblau H, Ilk N, Jaaskelainen P, Torkkeli M, Palva A | J Bacteriol | 10.1128/JB.01782-08 | 2009 | |
| Enzymology | Identification and characterization of domains responsible for self-assembly and cell wall binding of the surface layer protein of Lactobacillus brevis ATCC 8287. | Avall-Jaaskelainen S, Hynonen U, Ilk N, Pum D, Sleytr UB, Palva A | BMC Microbiol | 10.1186/1471-2180-8-165 | 2008 | |
| Phylogeny | Isolation of surface (S) layer protein carrying Lactobacillus species from porcine intestine and faeces and characterization of their adhesion properties to different host tissues. | Jakava-Viljanen M, Palva A | Vet Microbiol | 10.1016/j.vetmic.2007.04.029 | 2007 | |
| Metabolism | Binding characteristics of the Lactobacillus brevis ATCC 8287 surface layer to extracellular matrix proteins. | de Leeuw E, Li X, Lu W | FEMS Microbiol Lett | 10.1111/j.1574-6968.2006.00313.x | 2006 | |
| Enzymology | New convenient defined media for [(35)S]methionine labelling and proteomic analyses of probiotic lactobacilli. | Savijoki K, Suokko A, Palva A, Varmanen P | Lett Appl Microbiol | 10.1111/j.1472-765X.2005.01853.x | 2006 | |
| Metabolism | Production of xylitol from D-xylose by recombinant Lactococcus lactis. | Nyyssola A, Pihlajaniemi A, Palva A, von Weymarn N, Leisola M | J Biotechnol | 10.1016/j.jbiotec.2005.03.014 | 2005 | |
| Metabolism | Surface display of the receptor-binding region of the Lactobacillus brevis S-layer protein in Lactococcus lactis provides nonadhesive lactococci with the ability to adhere to intestinal epithelial cells. | Avall-Jaaskelainen S, Lindholm A, Palva A | Appl Environ Microbiol | 10.1128/AEM.69.4.2230-2236.2003 | 2003 | |
| Metabolism | Identification by flagellum display of an epithelial cell- and fibronectin-binding function in the SlpA surface protein of Lactobacillus brevis. | Hynonen U, Westerlund-Wikstrom B, Palva A, Korhonen TK | J Bacteriol | 10.1128/JB.184.12.3360-3367.2002 | 2002 | |
| Enzymology | A novel enzyme, maltose 1-epimerase from Lactobacillus brevis IFO 3345. | Shirokane Y, Suzuki M | FEBS Lett | 10.1016/0014-5793(95)00524-d | 1995 | |
| Enzymology | Cloning, purification, and properties of a cofactor-independent glutamate racemase from Lactobacillus brevis ATCC 8287. | Yagasaki M, Iwata K, Ishino S, Azuma M, Ozaki A | Biosci Biotechnol Biochem | 10.1271/bbb.59.610 | 1995 | |
| Phylogeny | Comparative characterization of spirosomes isolated from Lactobacillus brevis, Lactobacillus fermentum, and Lactobacillus buchneri. | Nomura S, Masuda K, Kawata T | Microbiol Immunol | 10.1111/j.1348-0421.1989.tb01494.x | 1989 | |
| Enzymology | Purification and characterization of spirosomes in Lactobacillus brevis. | Ueki Y, Masuda K, Kawata T | Microbiol Immunol | 10.1111/j.1348-0421.1982.tb00172.x | 1982 | |
| Biotechnology | Probiotic and milk technological properties of Lactobacillus brevis. | Ronka E, Malinen E, Saarela M, Rinta-Koski M, Aarnikunnas J, Palva A | Int J Food Microbiol | 10.1016/s0168-1605(02)00315-x | 2003 |
| #8906 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20556 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #47423 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 21531 |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68381 | Automatically annotated from API rID32STR . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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