Liquorilactobacillus ghanensis (DSM 18630, CCUG 53453, CIP 109616)

Name: Liquorilactobacillus ghanensis (DSM 18630, CCUG 53453, CIP 109616)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6657

Type strain

Strain Designation L489

Culture col. no. DSM 18630 CCUG 53453 CIP 109616 JCM 15611 L489

NCBI tax ID(s) 1423750 399370

Special Collections DSMZ CCUG JCM CIP Literature strains

History <- D.S. Nielsen, L489 CCUG 53453 <-- D. Nielsen L489. CIP <- 2007, CCUG <- D.S. Nielsen, Copenhagen Univ., Copenhagen, Denmark: strain L489

Links

Liquorilactobacillus ghanensis L489 is a microaerophile, mesophilic, Gram-positive prokaryote that was isolated from cocoa fermentation.

Gram-positive motile rod-shaped microaerophile mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 309102

DSM 18630,CCUG 53453,JCM 15611,LMG 24876,CIP 109616

@ref 20215

Last LPSN update 2025-12-16 09:48:23

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Liquorilactobacillus

Species Liquorilactobacillus ghanensis

Full scientific name Liquorilactobacillus ghanensis (Nielsen et al. 2007) Zheng et al. 2020

Synonyms (1)

Lactobacillus ghanensis

BacDive ID	Other strains from **Liquorilactobacillus ghanensis** (3)	Type strain
6658	L. ghanensis L499, DSM 18631, CCUG 53454
165866	L. ghanensis JCM 8622
165894	L. ghanensis JCM 8650

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
32012	positive	1.95 µm	0.75 µm	rod-shaped
119611	positive			rod-shaped
125439	positive				92.9

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
7629	PEDIOCOCCUS DAMNOSUS MEDIUM (DSMZ Medium 231)	Medium recipe at MediaDive	Name: PEDIOCOCCUS DAMNOSUS MEDIUM (DSMZ Medium 231) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Yeast extract 5.0 g/l Na-acetate 5.0 g/l K2HPO4 2.0 g/l (NH4)3 citrate 2.0 g/l Tween 80 1.0 g/l Cysteine hydrochloride 0.5 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water
37651	MEDIUM 40- for Lactobacillus and Leuconostoc		Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g)
119611	CIP Medium 40	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
7629	positive	growth	30	mesophilic
32012	positive	growth	15-45
32012	positive	optimum	45	thermophilic
37651	positive	growth	37	mesophilic
59904	positive	growth	30-37	mesophilic
67770	positive	growth	37	mesophilic
119611	positive	growth	15-45
119611	negative	growth	10

Culture pH

@ref	Ability	Type	PH	PH range
32012	positive	optimum	3.9	acidophile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
7629	microaerophile
32012	anaerobe
59904	anaerobe
119611	facultative anaerobe
125439	microaerophile	96.8

Spore formation

32012

Spore formationno

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	+	builds acid from	from API 50CH acid
32012	17057 ChEBI	cellobiose	+	carbon source
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
32012	28757 ChEBI	fructose	+	carbon source
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
32012	28260 ChEBI	galactose	+	carbon source
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
32012	17234 ChEBI	glucose	+	carbon source
32012	17754 ChEBI	glycerol	+	carbon source
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	+	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
32012	24996 ChEBI	lactate	+	carbon source
32012	17716 ChEBI	lactose	+	carbon source
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
32012	17306 ChEBI	maltose	+	carbon source
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
32012	29864 ChEBI	mannitol	+	carbon source
32012	37684 ChEBI	mannose	+	carbon source
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
32012	506227 ChEBI	N-acetylglucosamine	+	carbon source
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
119611	17632 ChEBI	nitrate	-	reduction
119611	17632 ChEBI	nitrate	+	respiration
119611	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
32012	26546 ChEBI	rhamnose	+	carbon source
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
32012	17814 ChEBI	salicin	+	carbon source
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
32012	30911 ChEBI	sorbitol	+	carbon source
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
32012	17992 ChEBI	sucrose	+	carbon source
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
32012	27082 ChEBI	trehalose	+	carbon source
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
119611	15688 ChEBI	acetoin	-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
119611	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
119611	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
119611	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
119611	ornithine decarboxylase	-	4.1.1.17
119611	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
68382	valine arylamidase	-		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	vitamin K metabolism	100	5 of 5
66794	coenzyme A metabolism	100	4 of 4
66794	acetoin degradation	100	3 of 3
66794	ppGpp biosynthesis	100	4 of 4
66794	glycogen biosynthesis	100	4 of 4
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	palmitate biosynthesis	100	22 of 22
66794	acetate fermentation	100	4 of 4
66794	L-lactaldehyde degradation	100	3 of 3
66794	teichoic acid biosynthesis	100	1 of 1
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	folate polyglutamylation	100	1 of 1
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	suberin monomers biosynthesis	100	2 of 2
66794	pentose phosphate pathway	90.91	10 of 11
66794	valine metabolism	88.89	8 of 9
66794	aspartate and asparagine metabolism	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	pyrimidine metabolism	82.22	37 of 45
66794	Entner Doudoroff pathway	80	8 of 10
66794	peptidoglycan biosynthesis	80	12 of 15
66794	flavin biosynthesis	80	12 of 15
66794	glycogen metabolism	80	4 of 5
66794	threonine metabolism	80	8 of 10
66794	methylglyoxal degradation	80	4 of 5
66794	photosynthesis	78.57	11 of 14
66794	serine metabolism	77.78	7 of 9
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	purine metabolism	76.6	72 of 94
66794	isoleucine metabolism	75	6 of 8
66794	ketogluconate metabolism	75	6 of 8
66794	glutamate and glutamine metabolism	75	21 of 28
66794	proline metabolism	72.73	8 of 11
66794	NAD metabolism	72.22	13 of 18
66794	propanol degradation	71.43	5 of 7
66794	starch degradation	70	7 of 10
66794	urea cycle	69.23	9 of 13
66794	phenylalanine metabolism	69.23	9 of 13
66794	enterobactin biosynthesis	66.67	2 of 3
66794	octane oxidation	66.67	2 of 3
66794	cyanate degradation	66.67	2 of 3
66794	histidine metabolism	65.52	19 of 29
66794	glycolysis	64.71	11 of 17
66794	citric acid cycle	64.29	9 of 14
66794	d-xylose degradation	63.64	7 of 11
66794	degradation of sugar alcohols	62.5	10 of 16
66794	C4 and CAM-carbon fixation	62.5	5 of 8
66794	gluconeogenesis	62.5	5 of 8
66794	dTDPLrhamnose biosynthesis	62.5	5 of 8
66794	alanine metabolism	62.07	18 of 29
66794	oxidative phosphorylation	61.54	56 of 91
66794	leucine metabolism	61.54	8 of 13
66794	vitamin B1 metabolism	61.54	8 of 13
66794	degradation of hexoses	61.11	11 of 18
66794	cellulose degradation	60	3 of 5
66794	degradation of sugar acids	60	15 of 25
66794	degradation of aromatic, nitrogen containing compounds	58.33	7 of 12
66794	methionine metabolism	57.69	15 of 26
66794	glutathione metabolism	57.14	8 of 14
66794	tetrahydrofolate metabolism	57.14	8 of 14
66794	cysteine metabolism	55.56	10 of 18
66794	d-mannose degradation	55.56	5 of 9
66794	non-pathway related	55.26	21 of 38
66794	lysine metabolism	54.76	23 of 42
66794	tryptophan metabolism	52.63	20 of 38
66794	ethanol fermentation	50	1 of 2
66794	ribulose monophosphate pathway	50	1 of 2
66794	adipate degradation	50	1 of 2
66794	glycine metabolism	50	5 of 10
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	50	4 of 8
66794	myo-inositol biosynthesis	50	5 of 10
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	butanoate fermentation	50	2 of 4
66794	lactate fermentation	50	2 of 4
66794	cyclohexanol degradation	50	2 of 4
66794	CMP-KDO biosynthesis	50	2 of 4
66794	toluene degradation	50	2 of 4
66794	arginine metabolism	50	12 of 24
66794	isoprenoid biosynthesis	50	13 of 26
66794	propionate fermentation	50	5 of 10
66794	sulfopterin metabolism	50	2 of 4
66794	metabolism of disaccharids	45.45	5 of 11
66794	reductive acetyl coenzyme A pathway	42.86	3 of 7
66794	degradation of pentoses	42.86	12 of 28
66794	mevalonate metabolism	42.86	3 of 7
66794	cardiolipin biosynthesis	42.86	3 of 7
66794	ethylmalonyl-CoA pathway	40	2 of 5
66794	metabolism of amino sugars and derivatives	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	3-chlorocatechol degradation	40	2 of 5
66794	bacilysin biosynthesis	40	2 of 5
66794	lipoate biosynthesis	40	2 of 5
66794	lipid metabolism	38.71	12 of 31
66794	vitamin B6 metabolism	36.36	4 of 11
66794	tyrosine metabolism	35.71	5 of 14
66794	phenol degradation	35	7 of 20
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	formaldehyde oxidation	33.33	1 of 3
66794	lipid A biosynthesis	33.33	3 of 9
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	sphingosine metabolism	33.33	2 of 6
66794	IAA biosynthesis	33.33	1 of 3
66794	allantoin degradation	33.33	3 of 9
66794	sulfate reduction	30.77	4 of 13
66794	coenzyme M biosynthesis	30	3 of 10
66794	benzoyl-CoA degradation	28.57	2 of 7
66794	ubiquinone biosynthesis	28.57	2 of 7
66794	ascorbate metabolism	27.27	6 of 22
66794	carnitine metabolism	25	2 of 8
66794	androgen and estrogen metabolism	25	4 of 16
66794	phenylpropanoid biosynthesis	23.08	3 of 13
66794	4-hydroxymandelate degradation	22.22	2 of 9
66794	arachidonic acid metabolism	22.22	4 of 18
66794	nitrate assimilation	22.22	2 of 9
66794	polyamine pathway	21.74	5 of 23

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
119611	-	-	-	-	-	+	-	-	-	-	+	+	-	-	-	+	+	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
7629	-	-	-	-	-	-	-	-	-	-	+	+	+	+	-	+	-	-	+	-	-	-	+	+	-	+	+	+	-	-	-	+	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-
119611	not determinedn.d.	-	-	-	-	-	-	-	-	-	+	+	+	+	-	+	-	-	+	-	-	-	+	+	+	+	+	+	-	-	-	+	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	-
#Host Body-Site	#Plant	#Fruit (Seed)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
7629	cocoa fermentation	New Tafo	Ghana	GHA	Africa
59904	Cocoa fermentation		Ghana	GHA	Africa
67770	Ghanaian cocoa fermentations
119611	Cocoa fermentation	Tafo	Ghana	GHA	Africa

Taxonmaps

69479

Global distribution of 16S sequence LC480807 (>99% sequence identity) for Liquorilactobacillus ghanensis from Microbeatlas

Aquatic Samples	136
Soil Samples	60
Animal Samples	3202
Plant Samples	236
Total Samples	3634

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7629	1	Risk group (German classification) According to TRBA 466
119611	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM143523v1 assembly for Liquorilactobacillus ghanensis DSM 18630	scaffold	GCA_001435235	1423750.3	2663762875	1423750	68.65

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
7629	Lactobacillus ghanensis strain L489 16S ribosomal RNA gene, partial sequence	DQ523489	1460		399370
67770	Lactobacillus ghanensis JCM 15611 gene for 16S ribosomal RNA, partial sequence	LC480807	1496		399370

GC content

@ref	GC-content (mol%)	Method
7629	37.8
67770	37.1	genome sequence analysis
67770	37.8	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Liquorilactobacillus ghanensis DSM 18630
NCBI: GCA_001435235

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	76.00	no
125439	motility	BacteriaNetⓘ	no	70.50	no
125439	gram_stain	BacteriaNetⓘ	positive	92.90	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	96.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lactobacillus ghanensis DSM 18630
PATRIC: 1423750.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	87.55	yes
125438	anaerobic	anaerobicⓘ	no	83.32	no
125438	spore-forming	spore-formingⓘ	no	78.06	yes
125438	aerobic	aerobicⓘ	no	92.76	no
125438	thermophilic	thermophileⓘ	no	94.82	yes
125438	flagellated	motile2+ⓘ	yes	55.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Genome-Based Reclassification of Anoxybacillus geothermalis Filippidou et al. 2016 as a Later Heterotypic Synonym of Anoxybacillus rupiensis Derekova et al. 2007.	Inan Bektas K, Nalcaoglu A, Guler HI, Canakci S, Belduz AO.	Curr Microbiol	10.1007/s00284-024-03615-x	2024
	Biosynthesis of the tetrahydroxynaphthalene-derived meroterpenoid furaquinocin via reductive deamination and intramolecular hydroalkoxylation of an alkene.	Noguchi T, Zhao F, Moriwaki Y, Yamamoto H, Kudo K, Nagata R, Tomita T, Terada T, Shimizu K, Nishiyama M, Kuzuyama T.	Chem Sci	10.1039/d4sc08319a	2025
	Considerations Regarding the Cytotoxicity of Certain Classes of Fungal Polyketides-Potential Raw Materials for Skincare Products for Healthy and Diseased Skin.	Albisoru D, Radu N, Senin R, Caramihai MD, Begea M, Mulesa O, Roman V, Bostan M.	Pharmaceutics	10.3390/pharmaceutics17060759	2025
	Characterization of the metabolism of the yeast Yarrowia lipolytica growing as a biofilm.	Jenjitwanich A, Marx H, Sauer M.	FEMS Microbes	10.1093/femsmc/xtae026	2024
	Studies Regarding Antimicrobial Properties of Some Microbial Polyketides Derived from Monascus Strains.	Albisoru D, Radu N, Pirvu LC, Stefaniu A, Babeanu N, Stoica R, Mihai DP.	Antibiotics (Basel)	10.3390/antibiotics13111092	2024
Enzymology	Identification of a staphylococcal dipeptidase involved in the production of human body odor.	Herman R, Kinniment-Williams B, Rudden M, James AG, Wilkinson AJ, Murphy B, Thomas GH.	J Biol Chem	10.1016/j.jbc.2024.107928	2024
	Characterization of the diastaphenazine/izumiphenazine C biosynthetic gene cluster from plant endophyte Streptomyces diastaticus W2.	Dong J, He B, Wang R, Zuo X, Zhan R, Hu L, Li Y, He J.	Microb Biotechnol	10.1111/1751-7915.13909	2022
Metabolism	Biosynthesis of the isoprenoid moieties of furanonaphthoquinone I and endophenazine A in Streptomyces cinnamonensis DSM 1042.	Bringmann G, Haagen Y, Gulder TA, Gulder T, Heide L.	J Org Chem	10.1021/jo0703404	2007
Metabolism	A gene cluster for prenylated naphthoquinone and prenylated phenazine biosynthesis in Streptomyces cinnamonensis DSM 1042.	Haagen Y, Gluck K, Fay K, Kammerer B, Gust B, Heide L.	Chembiochem	10.1002/cbic.200600338	2006
Genetics	Genomic Evidence for Bacterial Determinants Influencing Obesity Development.	Isokpehi RD, Simmons SS, Johnson MO, Payton M.	Int J Environ Res Public Health	10.3390/ijerph14040345	2017
	Structural characterization of the Aspergillus niger citrate transporter CexA uncovers the role of key residues S75, R192 and Q196.	Alves J, Sousa-Silva M, Soares P, Sauer M, Casal M, Soares-Silva I.	Comput Struct Biotechnol J	10.1016/j.csbj.2023.04.025	2023
Phylogeny	Unravelling the Complete Genome of Archangium gephyra DSM 2261T and Evolutionary Insights into Myxobacterial Chitinases.	Sharma G, Subramanian S.	Genome Biol Evol	10.1093/gbe/evx066	2017
	Establishment of a near-contiguous genome sequence of the citric acid producing yeast Yarrowia lipolytica DSM 3286 with resolution of rDNA clusters and telomeres.	Luttermann T, Ruckert C, Wibberg D, Busche T, Schwarzhans JP, Friehs K, Kalinowski J.	NAR Genom Bioinform	10.1093/nargab/lqab085	2021
	Genomic Insights into the Distribution and Phylogeny of Glycopeptide Resistance Determinants within the Actinobacteria Phylum.	Andreo-Vidal A, Binda E, Fedorenko V, Marinelli F, Yushchuk O.	Antibiotics (Basel)	10.3390/antibiotics10121533	2021
Metabolism	Identification of the Lomofungin Biosynthesis Gene Cluster and Associated Flavin-Dependent Monooxygenase Gene in Streptomyces lomondensis S015.	Zhang C, Sheng C, Wang W, Hu H, Peng H, Zhang X.	PLoS One	10.1371/journal.pone.0136228	2015
Metabolism	Effect of plant oils upon lipase and citric acid production in Yarrowia lipolytica yeast.	Darvishi F, Nahvi I, Zarkesh-Esfahani H, Momenbeik F.	J Biomed Biotechnol	10.1155/2009/562943	2009
Metabolism	A soluble, magnesium-independent prenyltransferase catalyzes reverse and regular C-prenylations and O-prenylations of aromatic substrates.	Haagen Y, Unsold I, Westrich L, Gust B, Richard SB, Noel JP, Heide L.	FEBS Lett	10.1016/j.febslet.2007.05.031	2007
Genetics	Detection and genomic characterization of motility in Lactobacillus curvatus: confirmation of motility in a species outside the Lactobacillus salivarius clade.	Cousin FJ, Lynch SM, Harris HM, McCann A, Lynch DB, Neville BA, Irisawa T, Okada S, Endo A, O'Toole PW.	Appl Environ Microbiol	10.1128/aem.03594-14	2015
Metabolism	The biosynthetic genes for prenylated phenazines are located at two different chromosomal loci of Streptomyces cinnamonensis DSM 1042.	Seeger K, Flinspach K, Haug-Schifferdecker E, Kulik A, Gust B, Fiedler HP, Heide L.	Microb Biotechnol	10.1111/j.1751-7915.2010.00234.x	2011
Metabolism	Structure-based engineering increased the catalytic turnover rate of a novel phenazine prenyltransferase.	Zocher G, Saleh O, Heim JB, Herbst DA, Heide L, Stehle T.	PLoS One	10.1371/journal.pone.0048427	2012
Phylogeny	Aidingibacillus halophilus gen. nov., sp. nov., a novel member of the family Bacillaceae.	Wang Y, Chunyu WX, Jiang GQ, Huang L, Zhang B, Ji Y, Ding ZG, Yin M, Tang SK.	Antonie Van Leeuwenhoek	10.1007/s10482-017-0980-x	2018
	Halomonas salinarum sp. nov., a moderately halophilic bacterium isolated from saline soil in Yingkou, China.	Yin YL, Li FL, Wang L.	Arch Microbiol	10.1007/s00203-022-03032-3	2022
Phylogeny	Anoxybacillus calidus sp. nov., a thermophilic bacterium isolated from soil near a thermal power plant.	Cihan AC, Cokmus C, Koc M, Ozcan B.	Int J Syst Evol Microbiol	10.1099/ijs.0.056549-0	2014
Phylogeny	Halomonas salifodinae sp. nov., a halophilic bacterium isolated from a salt mine in China.	Wang Y, Wu YH, Wang CS, Xu XW, Oren A, Zhu XF, Wu M.	Int J Syst Evol Microbiol	10.1099/ijs.0.2008/000729-0	2008
Phylogeny	Lactobacillus ghanensis sp. nov., a motile lactic acid bacterium isolated from Ghanaian cocoa fermentations.	Nielsen DS, Schillinger U, Franz CMAP, Bresciani J, Amoa-Awua W, Holzapfel WH, Jakobsen M	Int J Syst Evol Microbiol	10.1099/ijs.0.64811-0	2007

References

#7629	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18630
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#28265	IJSEM 1468 2007 ( DOI 10.1099/ijs.0.64811-0 , PubMed 17625177 )
#32012	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28265
#37651	; Curators of the CIP;
#59904	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 53453
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#119611	Collection of Institut Pasteur ; Curators of the CIP; CIP 109616
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Liquorilactobacillus ghanensis (DSM 18630, CCUG 53453, CIP 109616)

Name and taxonomic classification

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Physiology and metabolism

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API 50CHac

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Genome browser: GCA_001435235

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