Name: Pedobacter sp. JCM 17665
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 162072

Type strain:

Species: Pedobacter sp.

Culture col. no.: JCM 17665

Strain history: M. K. Kim BS3.

NCBI tax ID(s): 1411316 (species)

Special Collections

Other strains from Pedobacter sp.

Section

Pedobacter sp. JCM 17665 is a bacterium that was isolated from Mushroom compost.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Sphingobacteriia*
	Order	*Sphingobacteriales*
	Family	*Sphingobacteriaceae*
	Genus	*Pedobacter*
	Full Scientific Name (LPSN)	Pedobacter Steyn et al. 1998

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Mushroom compost
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence JF806517 (>99% sequence identity) for Sphingobacteriaceae from Microbeatlas

Aquatic Samples	159
Soil Samples	561
Animal Samples	383
Plant Samples	332
Total Samples	1435

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Pedobacter sp. BS03 16S ribosomal RNA gene, partial sequence	JF806517	1444	GenBank ENA	1007094 tax ID

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 17665

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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