Name: Pedobacter sp. JCM 16322
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 161757

Type strain:

Species: Pedobacter sp.

Culture col. no.: JCM 16322, KCTC 22703

Strain history: K.-S. Bae L2b-b1 <-- W.-J. Jeong P-6.

NCBI tax ID(s): 1411316 (species)

Special Collections

JCM
KCTC

Other strains from Pedobacter sp.

Section

Pedobacter sp. JCM 16322 is a bacterium that was isolated from Soil in a potato field.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Sphingobacteriia*
	Order	*Sphingobacteriales*
	Family	*Sphingobacteriaceae*
	Genus	*Pedobacter*
	Full Scientific Name (LPSN)	Pedobacter Steyn et al. 1998

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	25 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil in a potato field
[Ref.: #67770]	Geographic location (country and/or sea, region)	Ochang, Chungbuk
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence FJ897518 (>99% sequence identity) for Pedobacter from Microbeatlas

Aquatic Samples	207
Soil Samples	500
Animal Samples	209
Plant Samples	174
Total Samples	1090

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Pedobacter sp. L2b-b1 16S ribosomal RNA gene, partial sequence	FJ897518	1391	GenBank ENA	641846 tax ID

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 16322, KCTC 22703

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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