Lactobacillus johnsonii (DSM 108981, Cla-CZ-4)

Name: Lactobacillus johnsonii (DSM 108981, Cla-CZ-4)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 160341

Type strain

Strain Designation Cla-CZ-4

Culture col. no. DSM 108981 Cla-CZ-4

NCBI tax ID(s) 33959

Special Collections DSMZ Chicken DZIF

History DSMZ <- T. Clavel, RWTH Aachen; Cla-CZ-4 <- C. Zenner, LMU, München;

Links

Lactobacillus johnsonii Cla-CZ-4 is a bacterium that was isolated from chicken cecal content, adult.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 403812

DSM 108981

@ref 20215

Last LPSN update 2026-05-29 08:44:25

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Lactobacillus

Species Lactobacillus johnsonii

Full scientific name Lactobacillus johnsonii Fujisawa et al. 1992

BacDive ID	Other strains from **Lactobacillus johnsonii** (14)	Type strain
6560	L. johnsonii DSM 10533, ATCC 33200, NCFB 2241, CCUG 30725, ... (type strain)
6561	L. johnsonii D3, DSM 20553, JCM 2122, LMG 18184
131033	L. johnsonii MIII-1B.7-2, DSM 100219
135326	L. johnsonii Omniflora, CIP 103654
135886	L. johnsonii A20, CIP 103781, NCDO 20, VPI 11694
136237	L. johnsonii CIP 103652, ATCC 332, CCUG 44520, JCM 1017, ...
136238	L. johnsonii CCUG 44519, IFO 13952, LMG 9437, JCM 8794, ...
137649	L. johnsonii 63E, 55 098 301, CIP 103782, CIP 71.34, NCDO ...
146549	L. johnsonii CCUG 31413, JCM 8793, LMG 18206
159210	L. johnsonii WCA-380-WT-3D, DSM 106897
160897	L. johnsonii JCM 1022, KCTC 3141, LMG 18175
165303	L. johnsonii JCM 5812, BCRC 14037, LMG 18193
165960	L. johnsonii JCM 8791, LMG 18204
165961	L. johnsonii JCM 8792, LMG 18205

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
67247	BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58)		Medium recipe at MediaDive	Name: BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58) Composition: Glucose 10.0 g/l Casein peptone 10.0 g/l Bacto Soytone 5.0 g/l Meat extract 5.0 g/l Yeast extract 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l MnSO4 x H2O 0.05 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Tween 80 Resazurin Distilled water
67247	WILKINS-CHALGREN ANAEROBE BROTH (DSMZ Medium 339)		Medium recipe at MediaDive	Name: WILKINS-CHALGREN ANAEROBE BROTH (DSMZ Medium 339) Composition: dehydrated Wilkins-Chalgren medium 33.0 g/l L-Cysteine HCl 0.3 g/l Sodium resazurin 0.0005 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
67247	positive	growth	37

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	29016 ChEBI	arginine	-	hydrolysis	from API rID32A
68380	29985 ChEBI	L-glutamate	+	degradation	from API rID32A
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68380	35581 ChEBI	indole	-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68380	alanine arylamidase	+	3.4.11.2	from API rID32A
68380	alkaline phosphatase	-	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
68380	alpha-galactosidase	+	3.2.1.22	from API rID32A
68380	alpha-glucosidase	+	3.2.1.20	from API rID32A
68380	arginine dihydrolase	-	3.5.3.6	from API rID32A
68380	beta-galactosidase	-	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68380	beta-glucosidase	+	3.2.1.21	from API rID32A
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68380	glutamate decarboxylase	+	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	+		from API rID32A
68380	histidine arylamidase	+		from API rID32A
68380	L-arginine arylamidase	+		from API rID32A
68380	leucine arylamidase	+	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	+	3.4.11.1	from API rID32A
68380	phenylalanine arylamidase	+		from API rID32A
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	+		from API rID32A
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	+		from API rID32A
68380	urease	-	3.5.1.5	from API rID32A

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
67247	-	-	+	-	-	+	+	-	-	+/-	+/-	+/-	+	-	-	-	-	+	+/-	+	+	+	-	+	+	+	+	-	+

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
67247	chicken cecal content, adult	Munich	Germany	DEU	Europe	48.1502	11.5856 48.1502/11.5856

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
67247	1	Risk group (German classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67247	Lactobacillus johnsonii strain ClaCZ4 16S ribosomal RNA gene, partial sequence	MN055929.1	1511		33959

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67247	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 108981
#68380	Automatically annotated from API rID32A .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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