Name: Brevibacillus thermoruber PM1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 160340

Type strain:

Species: Brevibacillus thermoruber

Strain Designation: PM1

Culture col. no.: DSM 26550

Strain history: <- G. King, Louisiana State Univ., Baton Rouge, USA; PM1 <- C. King

NCBI tax ID(s): 33942 (species)

SI-ID 397185

DSM 26550

Special Collections

DSMZ

Other strains from Brevibacillus thermoruber

Section

Brevibacillus thermoruber PM1 is a spore-forming bacterium that was isolated from microbial mat.

spore-forming
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Brevibacillus*
	Species	**Brevibacillus thermoruber**
	Full Scientific Name (LPSN)	Brevibacillus thermoruber (Manachini et al. 1985 ex Guicciardi et al. 1968) Shida et al. 1996

Synonym

Bacillus thermoruber

Information on culture and growth conditions Culture and growth conditions

[Ref.: #67246]

Culture medium

GYE - MEDIUM (DSMZ Medium 572)

[Ref.: #67246]

Culture medium growth

[Ref.: #67246]

Culture medium link

Medium recipe at MediaDive

[Ref.: #67246]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #67246]			growth	55 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67246]	Sample type/isolated from	microbial mat
[Ref.: #67246]	Geographic location (country and/or sea, region)	Hawaii Noational Volcanoes Park, Puhimau geothermal area
[Ref.: #67246]	Country	USA
[Ref.: #67246]	Country ISO 3 Code	USA
[Ref.: #67246]	Continent	North America
* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #67246]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Brevibacillus thermoruber PM1	GCA_000744635	contig	GenBank ENA	1382302 tax ID	*
[Ref.: #66792]	Brevibacillus thermoruber PM1	1382302.3	wgs	PATRIC	1382302 tax ID	*
[Ref.: #66792]	Brevibacillus thermoruber PM1	2571042366	draft	JGI IMG/M	1382302 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Brevibacillus thermoruber PM1 PATRIC: 1382302.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	62.621	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	95.348	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	89.469	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	68.753	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	83.637	no
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	81.383	no

Availability in culture collections External links

[Ref.: #67246]

Culture collection no.

DSM 26550

[Ref.: #112593]

SI-ID 397185

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67246

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26550

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#112593

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID397185.1 )

* These data were automatically processed and therefore are not curated

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