Name: Acinetobacter baumannii CIP 110428
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 134717

Type strain:

Species: Acinetobacter baumannii

Culture col. no.: CIP 110428, NIPH 146

Strain history: CIP <- 2012, A. Nemec, Inst. Pasteur, Paris, France: strain NIPH 146

NCBI tax ID(s): 1217639 (strain), 470 (species)

SI-ID 412935

CIP 110428

Special Collections

Other strains from Acinetobacter baumannii

Section

Acinetobacter baumannii CIP 110428 is a Gram-negative bacterium of the family Moraxellaceae.

Gram-negative
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Moraxellaceae*
	Genus	*Acinetobacter*
	Species	**Acinetobacter baumannii**
	Full Scientific Name (LPSN)	Acinetobacter baumannii Bouvet and Grimont 1986

Information on morphological and physiological properties Morphology

[Ref.: #33359]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %98.5

[Ref.: #33359]	Cell shape	oval-shaped

[Ref.: #33359]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #33359]

Culture medium

MEDIUM 29- Brain heart agar

[Ref.: #33359]

Culture medium growth

[Ref.: #33359]

Culture medium composition

expand / minimize

[Ref.: #33359]

Culture medium

CIP Medium 29

[Ref.: #33359]

Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #33359]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

aerobe Confidence in %90.307

[Ref.: #69480]	Ability of spore formation	no Confidence in %92.898
[Ref.: #69481]	Ability of spore formation	no Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #33359]	Sample type/isolated from	Human, Wound
[Ref.: #33359]	Geographic location (country and/or sea, region)	Prague
[Ref.: #33359]	Country	Czech Republic
[Ref.: #33359]	Country ISO 3 Code	CZE
[Ref.: #33359]	Continent	Europe
[Ref.: #33359]	Isolation date	1993

[Ref.: #33359]	Geographic location (country and/or sea, region)	Praha
[Ref.: #33359]	Country	Czech Republic
[Ref.: #33359]	Country ISO 3 Code	CZE
[Ref.: #33359]	Continent	Europe
* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #33359]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Acinetobacter baumannii NIPH 146	GCA_000368185	scaffold	GenBank ENA	1217639 tax ID	*
[Ref.: #66792]	Acinetobacter baumannii NIPH 146	1217639.3	wgs	PATRIC	1217639 tax ID	*
[Ref.: #66792]	Acinetobacter baumannii NIPH 146	2534681908	draft	JGI IMG/M	1217639 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Acinetobacter baumannii NIPH 146 PATRIC: 1217639.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Acinetobacter baumannii NIPH 146 NIPH 146 NCBI: GCA_000368185.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	98.5	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	98.41	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	90.307	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	92.898	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	99.475	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	77.179	no

Availability in culture collections External links

[Ref.: #33359]

Culture collection no.

CIP 110428, NIPH 146

[Ref.: #92184]

SI-ID 412935

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Acinetobacter baumannii K116 capsular polysaccharide structure is a hybrid of the K14 and revised K37 structures.	Shashkov AS, Cahill SM, Arbatsky NP, Westacott AC, Kasimova AA, Shneider MM, Popova AV, Shagin DA, Shelenkov AA, Mikhailova YV, Yanushevich YG, Edelstein MV, Kenyon JJ, Knirel YA	Carbohydr Res	10.1016/j.carres.2019.107774	2019	*
Genetics	Structure of the neutral capsular polysaccharide of Acinetobacter baumannii NIPH146 that carries the KL37 capsule gene cluster.	Arbatsky NP, Shneider MM, Kenyon JJ, Shashkov AS, Popova AV, Miroshnikov KA, Volozhantsev NV, Knirel YA	Carbohydr Res	10.1016/j.carres.2015.05.003	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#33359 Collection of Institut Pasteur ; Curators of the CIP; CIP 110428

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#92184

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID412935.1 )

* These data were automatically processed and therefore are not curated

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