Acinetobacter baumannii CIP 110436 is an aerobe, Gram-negative, oval-shaped bacterium of the family Moraxellaceae.
Gram-negative oval-shaped aerobe genome sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pseudomonadales |
| Family Moraxellaceae |
| Genus Acinetobacter |
| Species Acinetobacter baumannii |
| Full scientific name Acinetobacter baumannii Bouvet and Grimont 1986 |
| @ref | Name | Growth | Composition | Medium link | |
|---|---|---|---|---|---|
| 33428 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 33428 | CIP Medium 72 | Medium recipe at CIP |
| @ref | Biosafety level | Biosafety level comment | |
|---|---|---|---|
| 33428 | 1 | Risk group (French classification) |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | Acin_baum_NIPH_528_V1 assembly for Acinetobacter baumannii NIPH 528 | scaffold | 1217636 | 77.46 | ||||
| 124043 | ASM4505617v1 assembly for Acinetobacter baumannii RUH 134 | contig | 470 | 77.15 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 94.10 | no |
| 125439 | motility | BacteriaNetⓘ | no | 52.10 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 89.80 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 96.60 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 98.00 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 98.37 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 89.58 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 91.94 | no |
| 125438 | thermophilic | thermophileⓘ | no | 99.98 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 77.27 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| K2 Capsule Depolymerase Is Highly Stable, Is Refractory to Resistance, and Protects Larvae and Mice from Acinetobacter baumannii Sepsis. | Oliveira H, Mendes A, Fraga AG, Ferreira A, Pimenta AI, Mil-Homens D, Fialho AM, Pedrosa J, Azeredo J. | Appl Environ Microbiol | 10.1128/aem.00934-19 | 2019 | ||
| Metabolism | Functional Analysis and Antivirulence Properties of a New Depolymerase from a Myovirus That Infects Acinetobacter baumannii Capsule K45. | Oliveira H, Costa AR, Ferreira A, Konstantinides N, Santos SB, Boon M, Noben JP, Lavigne R, Azeredo J. | J Virol | 10.1128/jvi.01163-18 | 2019 | |
| Phylogeny | Genomics unveils country-to-country transmission between animal hospitals of a multidrug-resistant and sequence type 2 Acinetobacter baumannii clone. | Andre A, Plantade J, Durieux I, Durieu P, Godeux AS, Decellieres M, Pouzot-Nevoret C, Venner S, Charpentier X, Laaberki MH. | Microb Genom | 10.1099/mgen.0.001292 | 2024 | |
| Phylogeny | Lytic Capsule-Specific Acinetobacter Bacteriophages Encoding Polysaccharide-Degrading Enzymes. | Evseev PV, Sukhova AS, Tkachenko NA, Skryabin YP, Popova AV. | Viruses | 10.3390/v16050771 | 2024 | |
| Database for the ampC alleles in Acinetobacter baumannii. | Karah N, Jolley KA, Hall RM, Uhlin BE. | PLoS One | 10.1371/journal.pone.0176695 | 2017 | ||
| Pathogenicity | Deciphering Multifactorial Resistance Phenotypes in Acinetobacter baumannii by Genomics and Targeted Label-free Proteomics. | Cecchini T, Yoon EJ, Charretier Y, Bardet C, Beaulieu C, Lacoux X, Docquier JD, Lemoine J, Courvalin P, Grillot-Courvalin C, Charrier JP. | Mol Cell Proteomics | 10.1074/mcp.ra117.000107 | 2018 | |
| Phylogeny | Identification of 50 class D beta-lactamases and 65 Acinetobacter-derived cephalosporinases in Acinetobacter spp. | Perichon B, Goussard S, Walewski V, Krizova L, Cerqueira G, Murphy C, Feldgarden M, Wortman J, Clermont D, Nemec A, Courvalin P. | Antimicrob Agents Chemother | 10.1128/aac.01261-13 | 2014 | |
| Genetics | A novel method of consensus pan-chromosome assembly and large-scale comparative analysis reveal the highly flexible pan-genome of Acinetobacter baumannii. | Chan AP, Sutton G, DePew J, Krishnakumar R, Choi Y, Huang XZ, Beck E, Harkins DM, Kim M, Lesho EP, Nikolich MP, Fouts DE. | Genome Biol | 10.1186/s13059-015-0701-6 | 2015 | |
| Diversity and Antibiotic Susceptibility of Acinetobacter Strains From Milk Powder Produced in Germany. | Cho GS, Li B, Rostalsky A, Fiedler G, Rosch N, Igbinosa E, Kabisch J, Bockelmann W, Hammer P, Huys G, Franz CMAP. | Front Microbiol | 10.3389/fmicb.2018.00536 | 2018 | ||
| Phylogeny | Sequence-based typing of ade B as a potential tool to identify intraspecific groups among clinical strains of multidrug-resistant Acinetobacter baumannii. | Huys G, Huys G, Cnockaert M, Nemec A, Swings J. | J Clin Microbiol | 10.1128/jcm.43.10.5327-5331.2005 | 2005 | |
| Enzymology | [Comparison of Three Different Methods in Investigating the Molecular Epidemiology of Carbapenem-Resistant Acinetobacter baumannii Clinical Isolates]. | Ulucam Atay G, Bayramoglu G, Tosun I, Unsal U. | Mikrobiyol Bul | 10.5578/mb.202498131 | 2024 | |
| Ethnomedicinal documentation, phytochemical characterization, and biological evaluation of the traditional medicinal plants from Swat region of Pakistan. | Khan A, Panda SK, Hu H, Schoofs L, Luyten W. | PLoS One | 10.1371/journal.pone.0329735 | 2025 | ||
| Genetics | Genomic Investigation of Two Acinetobacter baumannii Outbreaks in a Veterinary Intensive Care Unit in The Netherlands. | Naing SY, Hordijk J, Duim B, Broens EM, van der Graaf-van Bloois L, Rossen JW, Robben JH, Leendertse M, Wagenaar JA, Zomer AL. | Pathogens | 10.3390/pathogens11020123 | 2022 | |
| A VersaTile-driven platform for rapid hit-to-lead development of engineered lysins. | Gerstmans H, Grimon D, Gutierrez D, Lood C, Rodriguez A, van Noort V, Lammertyn J, Lavigne R, Briers Y. | Sci Adv | 10.1126/sciadv.aaz1136 | 2020 | ||
| The New SH3b_T Domain Increases the Structural and Functional Variability Among SH3b-Like CBDs from Staphylococcal Phage Endolysins. | Vazquez R, Gutierrez D, Grimon D, Fernandez L, Garcia P, Rodriguez A, Briers Y. | Probiotics Antimicrob Proteins | 10.1007/s12602-024-10309-0 | 2025 | ||
| Antibacterial and Anti-Inflammatory Activity of an Antimicrobial Peptide Synthesized with D Amino Acids. | Brunetti J, Carnicelli V, Ponzi A, Di Giulio A, Lizzi AR, Cristiano L, Cresti L, Cappello G, Pollini S, Mosconi L, Rossolini GM, Bracci L, Falciani C, Pini A. | Antibiotics (Basel) | 10.3390/antibiotics9120840 | 2020 | ||
| Pathogenicity | Efficacy of Artilysin Art-175 against Resistant and Persistent Acinetobacter baumannii. | Defraine V, Schuermans J, Grymonprez B, Govers SK, Aertsen A, Fauvart M, Michiels J, Lavigne R, Briers Y. | Antimicrob Agents Chemother | 10.1128/aac.00285-16 | 2016 | |
| Enzymology | Dissemination of an NDM-2-producing Acinetobacter baumannii clone in an Israeli rehabilitation center. | Espinal P, Fugazza G, Lopez Y, Kasma M, Lerman Y, Malhotra-Kumar S, Goossens H, Carmeli Y, Vila J. | Antimicrob Agents Chemother | 10.1128/aac.00679-11 | 2011 | |
| Diversity of Acinetobacter baumannii in four French military hospitals, as assessed by multiple locus variable number of tandem repeats analysis. | Hauck Y, Soler C, Jault P, Merens A, Gerome P, Nab CM, Trueba F, Bargues L, Thien HV, Vergnaud G, Pourcel C. | PLoS One | 10.1371/journal.pone.0044597 | 2012 | ||
| Pathogenicity | Analysis of genes encoding penicillin-binding proteins in clinical isolates of Acinetobacter baumannii. | Cayo R, Rodriguez MC, Espinal P, Fernandez-Cuenca F, Ocampo-Sosa AA, Pascual A, Ayala JA, Vila J, Martinez-Martinez L. | Antimicrob Agents Chemother | 10.1128/aac.00459-11 | 2011 | |
| Pathogenicity | In vitro and in vivo antimicrobial activities of gallium nitrate against multidrug-resistant Acinetobacter baumannii. | Antunes LC, Imperi F, Minandri F, Visca P. | Antimicrob Agents Chemother | 10.1128/aac.01519-12 | 2012 | |
| Enzymology | Epidemic diffusion of OXA-23-producing Acinetobacter baumannii isolates in Italy: results of the first cross-sectional countrywide survey. | Principe L, Piazza A, Giani T, Bracco S, Caltagirone MS, Arena F, Nucleo E, Tammaro F, Rossolini GM, Pagani L, Luzzaro F, AMCLI-CRAb Survey Participants. | J Clin Microbiol | 10.1128/jcm.00291-14 | 2014 | |
| Pathogenicity | The synthetic N-terminal peptide of human lactoferrin, hLF(1-11), is highly effective against experimental infection caused by multidrug-resistant Acinetobacter baumannii. | Dijkshoorn L, Brouwer CP, Bogaards SJ, Nemec A, van den Broek PJ, Nibbering PH. | Antimicrob Agents Chemother | 10.1128/aac.48.12.4919-4921.2004 | 2004 | |
| Pathogenicity | In vitro activity of tigecycline in combination with various antimicrobials against multidrug resistant Acinetobacter baumannii. | Principe L, D'Arezzo S, Capone A, Petrosillo N, Visca P. | Ann Clin Microbiol Antimicrob | 10.1186/1476-0711-8-18 | 2009 | |
| Effect of High N-Acetylcysteine Concentrations on Antibiotic Activity against a Large Collection of Respiratory Pathogens. | Landini G, Di Maggio T, Sergio F, Docquier JD, Rossolini GM, Pallecchi L. | Antimicrob Agents Chemother | 10.1128/aac.01334-16 | 2016 | ||
| Phylogeny | Molecular epidemiology of multidrug-resistant Acinetobacter baumannii in a single institution over a 10-year period. | Runnegar N, Sidjabat H, Goh HM, Nimmo GR, Schembri MA, Paterson DL. | J Clin Microbiol | 10.1128/jcm.01208-10 | 2010 | |
| The opportunistic human pathogen Acinetobacter baumannii senses and responds to light. | Mussi MA, Gaddy JA, Cabruja M, Arivett BA, Viale AM, Rasia R, Actis LA. | J Bacteriol | 10.1128/jb.00917-10 | 2010 | ||
| Enzymology | Iron-Regulated Phospholipase C Activity Contributes to the Cytolytic Activity and Virulence of Acinetobacter baumannii. | Fiester SE, Arivett BA, Schmidt RE, Beckett AC, Ticak T, Carrier MV, Ghosh R, Ohneck EJ, Metz ML, Sellin Jeffries MK, Actis LA. | PLoS One | 10.1371/journal.pone.0167068 | 2016 | |
| Enzymology | A novel flow cytometry assay based on bacteriophage-derived proteins for Staphylococcus detection in blood. | Costa SP, Dias NM, Melo LDR, Azeredo J, Santos SB, Carvalho CM. | Sci Rep | 10.1038/s41598-020-62533-7 | 2020 | |
| Phylogeny | O-antigen diversity among Acinetobacter baumannii strains from the Czech Republic and Northwestern Europe, as determined by lipopolysaccharide-specific monoclonal antibodies. | Pantophlet R, Nemec A, Brade L, Brade H, Dijkshoorn L. | J Clin Microbiol | 10.1128/jcm.39.7.2576-2580.2001 | 2001 | |
| Comparison of outbreak and nonoutbreak Acinetobacter baumannii strains by genotypic and phenotypic methods. | Dijkshoorn L, Aucken H, Gerner-Smidt P, Janssen P, Kaufmann ME, Garaizar J, Ursing J, Pitt TL. | J Clin Microbiol | 10.1128/jcm.34.6.1519-1525.1996 | 1996 | ||
| Phylogeny | Development of a multilocus sequence typing scheme for characterization of clinical isolates of Acinetobacter baumannii. | Bartual SG, Seifert H, Hippler C, Luzon MA, Wisplinghoff H, Rodriguez-Valera F. | J Clin Microbiol | 10.1128/jcm.43.9.4382-4390.2005 | 2005 | |
| Pathogenicity | Evolution of AbGRI2-0, the Progenitor of the AbGRI2 Resistance Island in Global Clone 2 of Acinetobacter baumannii. | Blackwell GA, Nigro SJ, Hall RM | Antimicrob Agents Chemother | 10.1128/AAC.02662-15 | 2015 | |
| Pathogenicity | Tn6167, an antibiotic resistance island in an Australian carbapenem-resistant Acinetobacter baumannii GC2, ST92 isolate. | Nigro SJ, Hall RM | J Antimicrob Chemother | 10.1093/jac/dks037 | 2012 | |
| Pathogenicity | Differences in Acinetobacter baumannii strains and host innate immune response determine morbidity and mortality in experimental pneumonia. | de Breij A, Eveillard M, Dijkshoorn L, van den Broek PJ, Nibbering PH, Joly-Guillou ML | PLoS One | 10.1371/journal.pone.0030673 | 2012 | |
| Pathogenicity | Antibiotic resistance islands in A320 (RUH134), the reference strain for Acinetobacter baumannii global clone 2. | Nigro SJ, Hall RM | J Antimicrob Chemother | 10.1093/jac/dkr447 | 2011 | |
| Enzymology | Epidemiological characterization and distribution of carbapenem-resistant Acinetobacter baumannii clinical isolates in Italy. | Mezzatesta ML, D'Andrea MM, Migliavacca R, Giani T, Gona F, Nucleo E, Fugazza G, Pagani L, Rossolini GM, Stefani S | Clin Microbiol Infect | 10.1111/j.1469-0691.2011.03527.x | 2011 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #33428 | Collection of Institut Pasteur ; Curators of the CIP; CIP 110436 |
| #62381 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 60612 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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