Acinetobacter baumannii CIP 110431 is a Gram-negative, oval-shaped bacterium of the family Moraxellaceae.
Gram-negative oval-shaped genome sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pseudomonadales |
| Family Moraxellaceae |
| Genus Acinetobacter |
| Species Acinetobacter baumannii |
| Full scientific name Acinetobacter baumannii Bouvet and Grimont 1986 |
| @ref | Name | Growth | Composition | Medium link | |
|---|---|---|---|---|---|
| 34731 | MEDIUM 29- Brain heart agar | Distilled water make up to (1000.000 ml);Brain heart infusion agar (52.000 g) | |||
| 34731 | CIP Medium 29 | Medium recipe at CIP |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 34731 | positive | growth | 30 |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125438 | 93.898 |
| @ref | Biosafety level | Biosafety level comment | |
|---|---|---|---|
| 34731 | 1 | Risk group (French classification) |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | Acin_baum_NIPH_290_V1 assembly for Acinetobacter baumannii NIPH 290 | scaffold | 1217631 | 74.03 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 89.70 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 91.30 | no |
| 125439 | motility | BacteriaNetⓘ | no | 52.10 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 89.30 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 98.00 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 98.39 | no |
| 125438 | aerobic | aerobicⓘ | yes | 89.63 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 93.90 | no |
| 125438 | thermophilic | thermophileⓘ | no | 99.48 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 76.71 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| K2 Capsule Depolymerase Is Highly Stable, Is Refractory to Resistance, and Protects Larvae and Mice from Acinetobacter baumannii Sepsis. | Oliveira H, Mendes A, Fraga AG, Ferreira A, Pimenta AI, Mil-Homens D, Fialho AM, Pedrosa J, Azeredo J. | Appl Environ Microbiol | 10.1128/aem.00934-19 | 2019 | ||
| Metabolism | Functional Analysis and Antivirulence Properties of a New Depolymerase from a Myovirus That Infects Acinetobacter baumannii Capsule K45. | Oliveira H, Costa AR, Ferreira A, Konstantinides N, Santos SB, Boon M, Noben JP, Lavigne R, Azeredo J. | J Virol | 10.1128/jvi.01163-18 | 2019 | |
| Comparative Structure-Activity Analysis of the Antimicrobial Activity, Cytotoxicity, and Mechanism of Action of the Fungal Cyclohexadepsipeptides Enniatins and Beauvericin. | Olleik H, Nicoletti C, Lafond M, Courvoisier-Dezord E, Xue P, Hijazi A, Baydoun E, Perrier J, Maresca M. | Toxins (Basel) | 10.3390/toxins11090514 | 2019 | ||
| Synthesis and Evaluation of the Antibacterial Activities of 13-Substituted Berberine Derivatives. | Olleik H, Yacoub T, Hoffer L, Gnansounou SM, Benhaiem-Henry K, Nicoletti C, Mekhalfi M, Pique V, Perrier J, Hijazi A, Baydoun E, Raymond J, Piccerelle P, Maresca M, Robin M. | Antibiotics (Basel) | 10.3390/antibiotics9070381 | 2020 | ||
| Detection and Typing of Plasmids in Acinetobacter baumannii Using rep Genes Encoding Replication Initiation Proteins. | Lam MMC, Koong J, Holt KE, Hall RM, Hamidian M. | Microbiol Spectr | 10.1128/spectrum.02478-22 | 2023 | ||
| Genetics | Crucial Role of the Accessory Genome in the Evolutionary Trajectory of Acinetobacter baumannii Global Clone 1. | Alvarez VE, Quiroga MP, Galan AV, Vilacoba E, Quiroga C, Ramirez MS, Centron D. | Front Microbiol | 10.3389/fmicb.2020.00342 | 2020 | |
| Pathogenicity | Deciphering Multifactorial Resistance Phenotypes in Acinetobacter baumannii by Genomics and Targeted Label-free Proteomics. | Cecchini T, Yoon EJ, Charretier Y, Bardet C, Beaulieu C, Lacoux X, Docquier JD, Lemoine J, Courvalin P, Grillot-Courvalin C, Charrier JP. | Mol Cell Proteomics | 10.1074/mcp.ra117.000107 | 2018 | |
| Database for the ampC alleles in Acinetobacter baumannii. | Karah N, Jolley KA, Hall RM, Uhlin BE. | PLoS One | 10.1371/journal.pone.0176695 | 2017 | ||
| Enzymology | CRISPR-cas subtype I-Fb in Acinetobacter baumannii: evolution and utilization for strain subtyping. | Karah N, Samuelsen O, Zarrilli R, Sahl JW, Wai SN, Uhlin BE. | PLoS One | 10.1371/journal.pone.0118205 | 2015 | |
| A new subclass of intrinsic aminoglycoside nucleotidyltransferases, ANT(3")-II, is horizontally transferred among Acinetobacter spp. by homologous recombination. | Zhang G, Leclercq SO, Tian J, Wang C, Yahara K, Ai G, Liu S, Feng J. | PLoS Genet | 10.1371/journal.pgen.1006602 | 2017 | ||
| Enzymology | Origin in Acinetobacter guillouiae and dissemination of the aminoglycoside-modifying enzyme Aph(3')-VI. | Yoon EJ, Goussard S, Touchon M, Krizova L, Cerqueira G, Murphy C, Lambert T, Grillot-Courvalin C, Nemec A, Courvalin P. | mBio | 10.1128/mbio.01972-14 | 2014 | |
| Phylogeny | Identification of 50 class D beta-lactamases and 65 Acinetobacter-derived cephalosporinases in Acinetobacter spp. | Perichon B, Goussard S, Walewski V, Krizova L, Cerqueira G, Murphy C, Feldgarden M, Wortman J, Clermont D, Nemec A, Courvalin P. | Antimicrob Agents Chemother | 10.1128/aac.01261-13 | 2014 | |
| Phylogeny | Sequence-based typing of ade B as a potential tool to identify intraspecific groups among clinical strains of multidrug-resistant Acinetobacter baumannii. | Huys G, Huys G, Cnockaert M, Nemec A, Swings J. | J Clin Microbiol | 10.1128/jcm.43.10.5327-5331.2005 | 2005 | |
| Phylogeny | O-antigen diversity among Acinetobacter baumannii strains from the Czech Republic and Northwestern Europe, as determined by lipopolysaccharide-specific monoclonal antibodies. | Pantophlet R, Nemec A, Brade L, Brade H, Dijkshoorn L. | J Clin Microbiol | 10.1128/jcm.39.7.2576-2580.2001 | 2001 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #34731 | Collection of Institut Pasteur ; Curators of the CIP; CIP 110431 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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