Acinetobacter baumannii CIP 70.22 is an obligate aerobe, mesophilic, Gram-negative prokaryote of the family Moraxellaceae.
Gram-negative rod-shaped obligate aerobe mesophilic genome sequence| @ref 20215 |
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|
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pseudomonadales |
| Family Moraxellaceae |
| Genus Acinetobacter |
| Species Acinetobacter baumannii |
| Full scientific name Acinetobacter baumannii Bouvet and Grimont 1986 |
| @ref | Name | Growth | Composition | Medium link | |
|---|---|---|---|---|---|
| 41074 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 41074 | CIP Medium 72 | Medium recipe at CIP |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 41074 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 41074 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 41074 | beta-galactosidase | - | 3.2.1.23 | |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 41074 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 41074 | gamma-glutamyltransferase | + | 2.3.2.2 | |
| 41074 | gelatinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 41074 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 41074 | ornithine decarboxylase | + | 4.1.1.17 | |
| 41074 | oxidase | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 41074 | urease | + | 3.5.1.5 | |
| 68382 | valine arylamidase | + | from API zym |
| @ref | Biosafety level | Biosafety level comment | |
|---|---|---|---|
| 41074 | 1 | Risk group (French classification) |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 66792 | ASM199728v1 assembly for Acinetobacter baumannii ATCC 17945 | scaffold | 470 | 63.14 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 96.70 | no |
| 125439 | motility | BacteriaNetⓘ | no | 58.20 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 85.80 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 94.70 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 98.00 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 98.33 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 90.06 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 94.10 | no |
| 125438 | thermophilic | thermophileⓘ | no | 99.98 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 76.18 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Acinetobacter baumannii in human body louse. | La Scola B, Raoult D. | Emerg Infect Dis | 10.3201/eid1009.040242 | 2004 | ||
| Genetics | Validation and Implementation of Clinical Laboratory Improvements Act-Compliant Whole-Genome Sequencing in the Public Health Microbiology Laboratory. | Kozyreva VK, Truong CL, Greninger AL, Crandall J, Mukhopadhyay R, Chaturvedi V. | J Clin Microbiol | 10.1128/jcm.00361-17 | 2017 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #41074 | Collection of Institut Pasteur ; Curators of the CIP; CIP 70.22 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68382 | Automatically annotated from API zym . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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