Fructilactobacillus fructivorans (CCUG 32247, LMG 9478, IAM H42)

Name: Fructilactobacillus fructivorans (CCUG 32247, LMG 9478, IAM H42)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6474

Type strain

Strain Designation H42

Culture col. no. CCUG 32247 LMG 9478 IAM H42 CIP 103141 LMG 11720 14 more

NCBI tax ID(s) 1614

Special Collections DSMZ CCUG JCM KCTC CIP

History <- ATCC <- IAM (K. Kitahara), H42 <- T. Kaneko ATCC 15434 <-- K. Kitahara H42 <-- T. Kaneko. CIP <- 1988, DSMZ, Lactobacillus homohiochii <- ATCC <- K. Kitahara: strain H42 <- T. Kaneko

Links

Fructilactobacillus fructivorans H42 is an anaerobe, mesophilic, Gram-positive prokaryote that was isolated from spoilt sake.

Gram-positive rod-shaped anaerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 92310

LMG 11720,ATCC 15434,CCRC 12938,CIP 103141,JCM 1199,LMG 18451,LMG 18930,LMG 9478,NCFB 2719,CCUG 32247,NCDO 2719,JCM 7793,IFO 15887,NCIMB 702719,CECT 4136,KCTC 3534,NBRC 15887,BCRC 12938,KCTC 3963,NRRL B-4559,DSM 20571

@ref 20215

Last LPSN update 2026-02-09 11:19:13

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Fructilactobacillus

Species Fructilactobacillus fructivorans

Full scientific name Fructilactobacillus fructivorans (Charlton et al. 1934) Zheng et al. 2020

Synonyms (4)

Lactobacillus fructivorans
Lactobacillus heterohiochii
Lactobacillus trichodes
Lactobacillus homohiochii

BacDive ID	Other strains from **Fructilactobacillus fructivorans** (5)	Type strain
6461	F. fructivorans CCUG 32260, NCIMB 8039, JCM 1117, IFO 13954, ... (type strain)
6463	F. fructivorans H1, DSM 20350, ATCC 15435, JCM 1198, NRIC ...
6464	F. fructivorans DSM 20607, ATCC 27394, NCDO 1985
172824	F. fructivorans W1, CRBIP24.176
172825	F. fructivorans W2, CRBIP24.177

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
119470	positive	rod-shaped
125438	positive			91.51

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
8921	LACTOBACILLUS MEDIUM II (DSMZ Medium 93)	Medium recipe at MediaDive	Name: LACTOBACILLUS MEDIUM II (DSMZ Medium 93) Composition: Na-acetate 20.0 g/l Glucose 20.0 g/l Agar 15.0 g/l Casein peptone 10.0 g/l Yeast extract 5.0 g/l Meat extract 2.0 g/l K2HPO4 0.5 g/l KH2PO4 0.5 g/l MgSO4 x 7 H2O 0.2 g/l DL-mevalonic acid 0.03 g/l FeSO4 x 7 H2O 0.01 g/l MnSO4 x H2O 0.0075 g/l Tween 80 Ethanol Distilled water
42101	MEDIUM 46 - for Lactobacillus homohiochii		Distilled water make up to (1000.000 ml);Iron (II) sulphate heptahydrate (10.000 mg);Magnesium sulphate heptahydrate (200.000 mg);Agar (15.000 g);Glucose (20.000 g);Yeast extract (5.000 g);Potassium di-hydrogen phosphate (0.500 g);Sodium acetate (20.000g)
119470	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
8921	positive	growth	28	mesophilic
42101	positive	growth	25	mesophilic
50928	positive	growth	30-37	mesophilic
67770	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
50928	anaerobe
50928	microaerophile
119470	facultative anaerobe
125439	microaerophile	95.6

Murein

@ref	Murein short key	Type
8921	A11.31	A4alpha L-Lys-D-Asp

Observation

67770

ObservationAssay of Mevalonic acid

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	-	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
119470	17632 ChEBI	nitrate	-	reduction
119470	17632 ChEBI	nitrate	+	respiration
119470	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
119470	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
119470	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
119470	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
119470	ornithine decarboxylase	-	4.1.1.17
119470	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
119470	-	+	-	-	-	+	+	-	-	-	+	-	-	-	-	-	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
8921	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	#Fermented
#Environmental	#Microbial community	-
#Engineered	#Food production	#Beverage

Isolation

@ref	Sample type
8921	spoilt sake
50928	Sake,spoiled
67770	Spoiled sake
119470	Food, Spoiled sake

Taxonmaps

69479

Global distribution of 16S sequence LC311740 (>99% sequence identity) for Fructilactobacillus fructivorans subclade from Microbeatlas

Aquatic Samples	96
Soil Samples	41
Animal Samples	438
Plant Samples	64
Total Samples	639

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
8921	1	Risk group (German classification) According to TRBA 466
119470	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM143698v1 assembly for Fructilactobacillus fructivorans DSM 20571	scaffold	GCA_001436985	33961.3	2657245150	1614	73.58

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Lactobacillus homohiochii ATCC 15434 16S ribosomal RNA gene, partial sequence	AF429511	503	33961
20218	Lactobacillus homohiochii strain ATCC 15434 16S ribosomal RNA gene, partial sequence; 16S-23S intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	AF429598	537	33961
20218	Lactobacillus homohiochii partial 16S rRNA gene, strain type strain:DSM 20571	AM113780	1537	33961
20218	Fructilactobacillus fructivorans JCM 1199 gene for 16S rRNA, partial sequence	AB289159	639	33961
20218	Fructilactobacillus fructivorans gene for 16S ribosomal RNA, partial sequence	D31694	206	33961
20218	Fructilactobacillus fructivorans JCM 7793 gene for 16S rRNA, partial sequence	AB289161	645	33961
20218	Lactobacillus homohiochii partial 16S rRNA gene, strain LMG 9478T	AJ621552	1473	33961
20218	Fructilactobacillus fructivorans NBRC 15887 gene for 16S rRNA, partial sequence	AB680990	1500	33961
67770	Lactobacillus homohiochii gene for 16S ribosomal RNA, partial sequence, strain: JCM 1199	LC311739	1506	1614
67770	Lactobacillus homohiochii gene for 16S ribosomal RNA, partial sequence, strain: JCM 7793	LC311740	1506	1614

GC content

@ref	GC-content (mol%)	Method
8921	38.0
67770	35.4	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Fructilactobacillus fructivorans DSM 20571
NCBI: GCA_001436985

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	68.90	no
125439	motility	BacteriaNetⓘ	no	69.90	no
125439	gram_stain	BacteriaNetⓘ	positive	82.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	95.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lactobacillus homohiochii strain DSM 20571
PATRIC: 33961.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	91.51	no
125438	anaerobic	anaerobicⓘ	no	76.95	no
125438	spore-forming	spore-formingⓘ	no	88.78	no
125438	aerobic	aerobicⓘ	no	92.05	yes
125438	thermophilic	thermophileⓘ	no	93.27	no
125438	flagellated	motile2+ⓘ	no	88.50	no

Literature

References

#8921	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20571
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#42101	; Curators of the CIP;
#50928	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 32247
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#119470	Collection of Institut Pasteur ; Curators of the CIP; CIP 103141
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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