Lentilactobacillus hilgardii 9 is a facultative anaerobe, Gram-positive, rod-shaped bacterium that was isolated from wine.
Gram-positive rod-shaped facultative anaerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Bacillota |
| Class Bacilli |
| Order Lactobacillales |
| Family Lactobacillaceae |
| Genus Lentilactobacillus |
| Species Lentilactobacillus hilgardii |
| Full scientific name Lentilactobacillus hilgardii (Douglas and Cruess 1936) Zheng et al. 2020 |
| Synonyms (1) |
| BacDive ID | Other strains from Lentilactobacillus hilgardii (8) | Type strain |
|---|---|---|
| 6472 | L. hilgardii DSM 20051 | |
| 165603 | L. hilgardii JCM 7762 | |
| 165864 | L. hilgardii JCM 8620 | |
| 172923 | L. hilgardii CRBIP24.10, Cuc 3 | |
| 172924 | L. hilgardii CRBIP24.13 | |
| 172925 | L. hilgardii CRBIP24.20 | |
| 172926 | L. hilgardii CRBIP24.33 | |
| 172927 | L. hilgardii R10JA, CRBIP24.9 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 8606 | MRS MEDIUM (DSMZ Medium 11) | Medium recipe at MediaDive | Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water | ||
| 34496 | MEDIUM 40- for Lactobacillus and Leuconostoc | Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g) | |||
| 119893 | CIP Medium 40 | Medium recipe at CIP |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 8606 | A11.31 | A4alpha L-Lys-D-Asp |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | - | builds acid from | from API 50CH acid |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | + | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | - | builds acid from | from API 50CH acid |
| 119893 | 17632 ChEBI | nitrate | - | reduction | |
| 119893 | 17632 ChEBI | nitrate | + | respiration | |
| 119893 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | 0 ChEBI | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid |
| 68371 | 0 ChEBI | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 68371 | 17992 ChEBI | sucrose | - | builds acid from | from API 50CH acid |
| 68371 | 27082 ChEBI | trehalose | - | builds acid from | from API 50CH acid |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 119893 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 119893 | alcohol dehydrogenase | + | 1.1.1.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | + | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 119893 | catalase | - | 1.11.1.6 | |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 119893 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 119893 | ornithine decarboxylase | - | 4.1.1.17 | |
| 119893 | oxidase | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68382 | valine arylamidase | - | from API zym |
| Metadata FA analysis | ||||||||||||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | |||||||||||||||||||||||||||||||||
| method/protocol | CCUG | |||||||||||||||||||||||||||||||||
| @ref | 49934 | |||||||||||||||||||||||||||||||||
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| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8606 | - | - | - | - | - | + | + | - | - | - | + | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 8606 | - | - | - | - | - | + | + | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 8606 | - | - | - | - | - | + | + | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | |
| 119893 | not determinedn.d. | - | - | - | - | + | + | - | - | - | + | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Engineered | #Food production | #Beverage | |
| #Engineered | #Food production | #Fermented | |
| #Host | #Plants | #Shrub (Scrub) | |
| #Host Body-Site | #Plant | #Fruit (Seed) |
Global distribution of 16S sequence LC064898 (>99% sequence identity) for Lentilactobacillus hilgardii from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | ASM435479v1 assembly for Lentilactobacillus hilgardii ATCC 8290 | scaffold | 1588 | 60.74 | ||||
| 67770 | ASM143465v1 assembly for Lentilactobacillus hilgardii DSM 20176 = ATCC 8290 | contig | 1423757 | 54.37 | ||||
| 67770 | ASM15931v1 assembly for Lentilactobacillus hilgardii DSM 20176 = ATCC 8290 | scaffold | 1423757 | 32.5 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Lactobacillus hilgardii ATCC 8290 16S ribosomal RNA gene, partial sequence | AF429510 | 513 | 1588 | ||
| 20218 | Lactobacillus hilgardii strain ATCC 8290 16S ribosomal RNA gene, partial sequence; 16S-23S intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | AF429597 | 544 | 1588 | ||
| 20218 | Lactobacillus hilgardii strain ATCC 8290 16S-23S ribosomal RNA intergenic spacer and 23S ribosomal RNA gene, partial sequence | EU161617 | 834 | 1588 | ||
| 20218 | Lactobacillus hilgardii strain DSM 20176 16S ribosomal RNA gene, partial sequence | M58821 | 1521 | 1588 | ||
| 20218 | Lactobacillus hilgardii gene for 16S rRNA, partial sequence, strain: JCM 1155 | AB289158 | 630 | 1588 | ||
| 20218 | Lentilactobacillus hilgardii gene for 16S rRNA, partial sequence, strain: YIT 0269 | AB429370 | 1566 | 1588 | ||
| 20218 | Lactobacillus hilgardii gene for 16S ribosomal RNA, partial sequence | D31693 | 227 | 1588 | ||
| 20218 | Lactobacillus hilgardii gene for 16S rRNA, partial sequence, strain: NBRC 15886 | AB680989 | 1499 | 1588 | ||
| 67770 | Lactobacillus hilgardii gene for 16S rRNA, partial sequence | AB262962 | 1549 | 1588 | ||
| 67770 | Lactobacillus hilgardii gene for 16S ribosomal RNA, partial sequence, strain: JCM 1155 | LC064898 | 1523 | 1588 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 97.63 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 55.01 | no |
| 125439 | motility | BacteriaNetⓘ | no | 71.66 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 86.83 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 93.66 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 86.32 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 79.26 | no |
| 125438 | aerobic | aerobicⓘ | no | 94.79 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 95.00 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 90.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | Unveiling the Potential of Lentilactobacillus hilgardii in Malolactic Fermentation: Comparative Genomics and Fermentation Dynamics. | Mantegazza G, Mangieri N, Yazdi EV, Russo P, Mora D, Gargari G. | Microb Biotechnol | 10.1111/1751-7915.70259 | 2025 | |
| Exploiting Potential Probiotic Lactic Acid Bacteria Isolated from Chlorella vulgaris Photobioreactors as Promising Vitamin B12 Producers. | Ribeiro M, Maciel C, Cruz P, Darmancier H, Nogueira T, Costa M, Laranjeira J, Morais RMSC, Teixeira P. | Foods | 10.3390/foods12173277 | 2023 | ||
| Genetics | Genome and Pangenome Analysis of Lactobacillus hilgardii FLUB-A New Strain Isolated from Mead. | Gustaw K, Koper P, Polak-Berecka M, Rachwal K, Skrzypczak K, Wasko A. | Int J Mol Sci | 10.3390/ijms22073780 | 2021 | |
| Biotechnological Potential of Lactic Acid Bacteria Isolated From Ethiopian Honey Wine, Tej. | Sisay M, Desalegn A, Tigu F, Ashenafi M, Bai FY, Birri DJ. | Int J Microbiol | 10.1155/ijm/4014096 | 2025 | ||
| Probiotic potential of 'lactobacilli' isolated from traditionally fermented Ethiopian honey wine (Tej). | Getachew T, Ashenafi M, Tigu F, Birri DJ, Naoli A, Desalegn A. | BMC Microbiol | 10.1186/s12866-025-04326-4 | 2025 | ||
| In Silico Identification and Molecular Characterization of Lentilactobacillus hilgardii Antimicrobial Peptides with Activity Against Carbapenem-Resistant Acinetobacter baumannii. | Appel A, Velazco L, Alreja AB, LeClair K, Duggal AP, Vashee I, Taal AM, Gonzalez-Juarbe N, Fouts DE. | Antibiotics (Basel) | 10.3390/antibiotics14101004 | 2025 | ||
| Oral aged garlic (Allium sativum) alleviates ulcerative colitis in mice by improving gut homeostasis. | Han D, Guan X, Zhu F, Yang Q, Su D. | Food Funct | 10.1039/d4fo03105a | 2024 | ||
| Lentilactobacillus hilgardii H-50 strongly inhibits lipopolysaccharide-induced inflammatory responses in mouse splenocytes via its specific surface layer proteins. | Yamaguchi T, Yasui K, Fujii S, Ichikawa K, Suzuki T, Sambongi Y, Yamamoto Y. | J Appl Microbiol | 10.1093/jambio/lxad021 | 2023 | ||
| Production of improved Ethiopian Tej using mixed lactic acid bacteria and yeast starter cultures. | Denekew K, Tigu F, Birri DJ, Ashenafi M, Bai FY, Desalegn A. | Sci Rep | 10.1038/s41598-025-05552-6 | 2025 | ||
| Combined microbiome and metabolome analysis of Dacha and Ercha fermented grains of Fen-flavor Baijiu. | Qu D, Wang Y, Cao L, Hou Q, Liu Z, Zhong J, Guo Z. | Food Chem (Oxf) | 10.1016/j.fochms.2025.100298 | 2025 | ||
| Enzymology | PotN represents a novel energy-state sensing PII subfamily, occurring in firmicutes. | Iskhakova ZI, Zhuravleva DE, Heim C, Hartmann MD, Laykov AV, Forchhammer K, Kayumov AR. | FEBS J | 10.1111/febs.16431 | 2022 | |
| Microbiological and chemical characterization of water kefir: An innovative source of potential probiotics for bee nutrition. | Rodriguez MA, Fernandez LA, Diaz ML, Perez M, Corona M, Reynaldi FJ. | Rev Argent Microbiol | 10.1016/j.ram.2022.09.003 | 2023 | ||
| Enzymology | Bioinformatic Analysis of Oxalate-Degrading Enzymes in Probiotics: A Systematic Genome-Scale and Structural Survey. | Du S, Sun K, Xiao B, Liu Z. | Microorganisms | 10.3390/microorganisms13112553 | 2025 | |
| Effect of dry matter content on the microbial community and on the effectiveness of a microbial inoculant to improve the aerobic stability of corn silage. | Benjamim da Silva E, Liu X, Mellinger C, Gressley TF, Stypinski JD, Moyer NA, Kung L. | J Dairy Sci | 10.3168/jds.2021-21515 | 2022 | ||
| Genetics | Multi-platform metagenomic characterization of the microbial community during spontaneous cacao fermentation. | Tigrero-Vaca J, Villavicencio-Vasquez M, Coronel J, Cevallos-Cevallos JM. | Front Bioeng Biotechnol | 10.3389/fbioe.2025.1630515 | 2025 | |
| Assessment of eight feed additives consisting of Lactiplantibacillus plantarumCNCM I-3235, L. plantarumCNCM I-3736/DSM 11672, Pediococcus acidilacticiCNCM I-3237, P. acidilacticiCNCM I-4622/DSM 11673, Pediococcus pentosaceusNCIMB 12455, Acidipropionibacterium acidipropioniciCNCM I-4661, Lentilactobacillus buchneriNCIMB 40788/CNCM I-4323 and L. buchneriNCIMB 40788/CNCM I-4323 plus Lentilactobacillus hilgardiiCNCM I-4785 for all animal species for the renewal of their authorisation (Danstar Ferment AG). | EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Bampidis V, Azimonti G, Bastos ML, Christensen H, Durjava M, Dusemund B, Kouba M, Lopez-Alonso M, Lopez Puente S, Marcon F, Mayo B, Pechova A, Petkova M, Ramos F, Sanz Y, Villa RE, Woutersen R, Anguita M, Brozzi R, Garcia-Cazorla Y, Galobart J, Tarres-Call J, Revez J. | EFSA J | 10.2903/j.efsa.2023.7865 | 2023 | ||
| Inoculation with Lentilactobacillus buchneri alone or in combination with Lentilactobacillus hilgardii modifies gene expression, fermentation profile, and starch digestibility in high-moisture corn. | Drouin P, da Silva EB, Tremblay J, Chevaux E, Apper E, Castex M. | Front Microbiol | 10.3389/fmicb.2023.1253588 | 2023 | ||
| Changes in Microbiota During Multiple Fermentation of Kefir in Different Sugar Solutions Revealed by High-Throughput Sequencing. | Gamba RR, Koyanagi T, Pelaez AL, De Antoni G, Enomoto T. | Curr Microbiol | 10.1007/s00284-021-02501-0 | 2021 | ||
| Changes to the microbiome of alfalfa during the growing season and after ensiling with Lentilactobacillus buchneri and Lentilactobacillus hilgardii inoculant. | Drouin P, Tremblay J, da Silva EB, Apper E. | J Appl Microbiol | 10.1111/jam.15641 | 2022 | ||
| Challenges in water kefir production and limitations in human consumption: A comprehensive review of current knowledge. | Bozkir E, Yilmaz B, Sharma H, Esatbeyoglu T, Ozogul F. | Heliyon | 10.1016/j.heliyon.2024.e33501 | 2024 | ||
| Effects of a mixture of Lentilactobacillus hilgardii, Lentilactobacillus buchneri, Pediococcus pentosaceus and fibrolytic enzymes on silage fermentation, aerobic stability, and performance of growing beef cattle. | Nair J, Yang HE, Redman AA, Chevaux E, Drouin P, McAllister TA, Wang Y. | Transl Anim Sci | 10.1093/tas/txac144 | 2022 | ||
| Preparation and Application of Directed Vat Set Indigenous Freeze-Drying Lentilactobacillus hilgardii Q19 Starter in Winemaking. | Wang L, Huang G, Ma W, Jin G. | Foods | 10.3390/foods12051053 | 2023 | ||
| Microbial Community and Functional Analysis of Regionally Produced Traditional Korean Grain Vinegar. | Lee SJ, Kim SH, Gwon HM, Park J. | Microorganisms | 10.3390/microorganisms13061308 | 2025 | ||
| Optimising a Functional Beverage from Quinoa and Cherimoya Mixtures Fermented with Water Kefir Grains. | Palacios-Castillo AE, Campoverde-Quilca TN, Nunez-Perez J, Burbano-Garcia JL, Pineda-Flores HM, Espin-Valladares RC, Zarate-Baca S, Pais-Chanfrau JM. | Foods | 10.3390/foods14203464 | 2025 | ||
| Exploration adhesion properties of Liquorilactobacillus and Lentilactobacillus isolated from two different sources of tepache kefir grains. | Oviedo-Leon JF, Cornejo-Mazon M, Ortiz-Hernandez R, Torres-Ramirez N, Hernandez-Sanchez H, Castro-Rodriguez DC. | PLoS One | 10.1371/journal.pone.0297900 | 2024 | ||
| The core microbiomes and associated metabolic potential of water kefir as revealed by pan multi-omics. | Breselge S, Skibinska I, Yin X, Brennan L, Kilcawley K, Cotter PD. | Commun Biol | 10.1038/s42003-025-07808-3 | 2025 | ||
| Lentilactobacillus hilgardii Inoculum, Dry Matter Contents at Harvest and Length of Conservation Affect Fermentation Characteristics and Aerobic Stability of Corn Silage. | Ferrero F, Tabacco E, Borreani G. | Front Microbiol | 10.3389/fmicb.2021.675563 | 2021 | ||
| Heterofermentative Lactic Acid Bacteria Enhance the Aerobic Stability of Sweet Sorghum Silage. | Tahir M, Wang T, Liu Z, Luo Y, Fu Z, Liu S, Zhong J. | Microb Biotechnol | 10.1111/1751-7915.70262 | 2025 | ||
| Effect of Milk and Water Kefir Grains on the Nutritional Profile and Antioxidant Capacity of Fermented Almond Milk. | La Torre C, Caputo P, Fazio A. | Molecules | 10.3390/molecules30030698 | 2025 | ||
| Backslopping Time, Rinsing of the Grains During Backslopping, and Incubation Temperature Influence the Water Kefir Fermentation Process. | Laureys D, Leroy F, Vandamme P, De Vuyst L. | Front Microbiol | 10.3389/fmicb.2022.871550 | 2022 | ||
| Pathogenicity | Morphological and physiological changes in Lentilactobacillus hilgardii cells after cold plasma treatment. | Niedzwiedz I, Juzwa W, Skrzypiec K, Skrzypek T, Wasko A, Kwiatkowski M, Pawlat J, Polak-Berecka M. | Sci Rep | 10.1038/s41598-020-76053-x | 2020 | |
| Biotechnology | Investigating Safety and Technological Traits of a Leading Probiotic Species: Lacticaseibacillus paracasei. | Colautti A, Ginaldi F, Camprini L, Comi G, Reale A, Iacumin L. | Nutrients | 10.3390/nu16142212 | 2024 | |
| Identification and Characterization of Malolactic Bacteria Isolated from the Eastern Foothills of Helan Mountain in China. | Sun J, Ge Y, Gu X, Li R, Ma W, Jin G. | Foods | 10.3390/foods11162455 | 2022 | ||
| Multi-omics characterization of the microbial populations and chemical space composition of a water kefir fermentation. | Arrieta-Echeverri MC, Fernandez GJ, Duarte-Riveros A, Correa-Alvarez J, Bardales JA, Villanueva-Mejia DF, Sierra-Zapata L. | Front Mol Biosci | 10.3389/fmolb.2023.1223863 | 2023 | ||
| Comparative structural insight into the unidirectional catalysis of ornithine carbamoyltransferases from Psychrobacter sp. PAMC 21119. | Do H, Nguyen DL, Lee CW, Lee MJ, Oh H, Hwang J, Han SJ, Lee SG, Lee JH. | PLoS One | 10.1371/journal.pone.0274019 | 2022 | ||
| Potential Probiotic Strains From Milk and Water Kefir Grains in Singapore-Use for Defense Against Enteric Bacterial Pathogens. | Tan LL, Tan CH, Ng NKJ, Tan YH, Conway PL, Loo SCJ. | Front Microbiol | 10.3389/fmicb.2022.857720 | 2022 | ||
| Microbial ecology of selected traditional Ethiopian fermented products. | Sanz-Lopez C, Amato M, Torrent D, Borrego M, Anza M, Bibiso M, Grijalva-Vallejos N, Vilanova C, Porcar M, Pascual J. | Front Microbiol | 10.3389/fmicb.2025.1570914 | 2025 | ||
| Compound lactic acid bacteria enhance the aerobic stability of Sesbania cannabina and corn mixed silage. | Tahir M, Wang T, Zhang J, Xia T, Deng X, Cao X, Zhong J. | BMC Microbiol | 10.1186/s12866-025-03781-3 | 2025 | ||
| Enzymology | The Type and Concentration of Inoculum and Substrate as Well as the Presence of Oxygen Impact the Water Kefir Fermentation Process. | Laureys D, Leroy F, Hauffman T, Raes M, Aerts M, Vandamme P, De Vuyst L. | Front Microbiol | 10.3389/fmicb.2021.628599 | 2021 | |
| Screening and Selection of Native Lactic Acid Bacteria Isolated from Chilean Grapes. | Vargas-Luna C, Godoy L, Benavides S, Ceppi de Lecco C, Urtubia A, Franco W. | Foods | 10.3390/foods14010143 | 2025 | ||
| Modulation of Fermentation Quality and Metabolome in Co-ensiling of Sesbania cannabina and Sweet Sorghum by Lactic Acid Bacterial Inoculants. | Xia T, Wang T, Sun J, Shi W, Liu Y, Huang F, Zhang J, Zhong J. | Front Microbiol | 10.3389/fmicb.2022.851271 | 2022 | ||
| Metabolism | Microbiota succession during aerobic stability of maize silage inoculated with Lentilactobacillus buchneri NCIMB 40788 and Lentilactobacillus hilgardii CNCM-I-4785. | Drouin P, Tremblay J, Renaud J, Apper E. | Microbiologyopen | 10.1002/mbo3.1153 | 2021 | |
| Biotechnology | Evaluation of the probiotic, technological, safety attributes, and GABA-producing capacity of microorganisms isolated from Iranian milk kefir beverages. | Moghimani M, Onyeaka H, Hashemi M, Afshari A. | Front Microbiol | 10.3389/fmicb.2024.1385301 | 2024 | |
| Effects of sorghum varieties on microbial communities and volatile compounds in the fermentation of light-flavor Baijiu. | Tang J, Lin B, Shan Y, Ruan S, Jiang W, Li Q, Zhu L, Li R, Yang Q, Du H, Yang S, Sun Q, Chen S. | Front Microbiol | 10.3389/fmicb.2024.1421928 | 2024 | ||
| Malolactic Fermentation: New Approaches to Old Problems. | Fu J, Wang L, Sun J, Ju N, Jin G. | Microorganisms | 10.3390/microorganisms10122363 | 2022 | ||
| Understanding the transition to viable but non-culturable state in Escherichia coli W3110: a comprehensive analysis of potential spectrochemical biomarkers. | Izgordu OK, Gurbanov R, Darcan C. | World J Microbiol Biotechnol | 10.1007/s11274-024-04019-6 | 2024 | ||
| Low microbial diversity, yeast prevalence, and nematode-trapping fungal presence in fungal colonization and leaf microbiome of Serjania erecta. | de Freitas STF, Silva FG, Bessa LA, de Souza UJB, Augusto DSS, de Faria GS, Vitorino LC. | Sci Rep | 10.1038/s41598-024-66161-3 | 2024 | ||
| Genetics | The production of esters by specific sourdough lactic acid bacteria species is limited by the precursor concentrations. | Pradal I, Weckx S, De Vuyst L. | Appl Environ Microbiol | 10.1128/aem.02216-24 | 2025 | |
| Potential of Bacteria from Alternative Fermented Foods as Starter Cultures for the Production of Wheat Sourdoughs. | Comasio A, Van Kerrebroeck S, Harth H, Verte F, De Vuyst L. | Microorganisms | 10.3390/microorganisms8101534 | 2020 | ||
| Genetics | Beneficial effects of GABA-producing potential probiotic Limosilactobacillus fermentum L18 of human origin on intestinal permeability and human gut microbiota. | Kaur S, Sharma P, Mayer MJ, Neuert S, Narbad A, Kaur S. | Microb Cell Fact | 10.1186/s12934-023-02264-2 | 2023 | |
| Phylogenetic variation in raw cow milk microbiota and the impact of forage combinations and use of silage inoculants. | Ouamba AJK, Gagnon M, Varin T, Chouinard PY, LaPointe G, Roy D. | Front Microbiol | 10.3389/fmicb.2023.1175663 | 2023 | ||
| Evaluation of Safety and Probiotic Traits from a Comprehensive Genome-Based In Silico Analysis of Ligilactobacillus salivarius P1CEA3, Isolated from Pigs and Producer of Nisin S. | Sevillano E, Lafuente I, Pena N, Cintas LM, Munoz-Atienza E, Hernandez PE, Borrero J. | Foods | 10.3390/foods13010107 | 2023 | ||
| Genetics | Fermentation with Lactic Acid Bacteria for Bean Flour Improvement: Experimental Study and Molecular Modeling as Complementary Tools. | Sabater C, Saez GD, Suarez N, Garro MS, Margolles A, Zarate G. | Foods | 10.3390/foods13132105 | 2024 | |
| Lacticaseibacillus Strains Isolated from Raw Milk: Screening Strategy for Their Qualification as Adjunct Culture in Cheesemaking. | Bettera L, Levante A, Bancalari E, Bottari B, Cirlini M, Neviani E, Gatti M. | Foods | 10.3390/foods12213949 | 2023 | ||
| Effect of the Bioprotective Properties of Lactic Acid Bacteria Strains on Quality and Safety of Feta Cheese Stored under Different Conditions. | Doukaki A, Papadopoulou OS, Baraki A, Siapka M, Ntalakas I, Tzoumkas I, Papadimitriou K, Tassou C, Skandamis P, Nychas GJ, Chorianopoulos N. | Microorganisms | 10.3390/microorganisms12091870 | 2024 | ||
| Assessment of Different Levels of Blackcurrant Juice and Furcellaran on the Quality of Fermented Whey-Based Beverages Using Rheological and Mechanical Vibration Damping Techniques | Rejdlova A, Vasina M, Lorencova E, Hruzik L, Salek R. | Foods | 2024 | |||
| Genetics | First report on metagenomics and their predictive functional analysis of fermented bamboo shoot food of Tripura, North East India. | Das R, Tamang B, Najar IN, Thakur N, Mondal K. | Front Microbiol | 10.3389/fmicb.2023.1158411 | 2023 | |
| Bacterial Community of Grana Padano PDO Cheese and Generical Hard Cheeses: DNA Metabarcoding and DNA Metafingerprinting Analysis to Assess Similarities and Differences. | Zago M, Rossetti L, Bardelli T, Carminati D, Nazzicari N, Giraffa G. | Foods | 10.3390/foods10081826 | 2021 | ||
| Metabolic cooperation between conspecific genotypic groups contributes to bacterial fitness. | Lin L, Du R, Wu Q, Xu Y. | ISME Commun | 10.1038/s43705-023-00250-8 | 2023 | ||
| Pathogenicity | Microbial toxins in fermented foods: health implications and analytical techniques for detection. | Fayyaz K, Nawaz A, Olaimat AN, Akram K, Farooq U, Fatima M, Siddiqui SA, Rana IS, Mahnoor M, Shahbaz HM. | J Food Drug Anal | 10.38212/2224-6614.3431 | 2022 | |
| Phylogeny | Time Evolution of Microbial Composition and Metabolic Profile for Biogenic Amines and Free Amino Acids in a Model Cucumber Fermentation System Brined with 0.5% to 5.0% Sodium Chloride. | Swider O, Wojcicki M, Bujak M, Juszczuk-Kubiak E, Szczepanska M, Roszko ML. | Molecules | 10.3390/molecules26195796 | 2021 | |
| Metagenomic Study on Chinese Homemade Paocai: The Effects of Raw Materials and Fermentation Periods on the Microbial Ecology and Volatile Components. | Jiang L, Xian S, Liu X, Shen G, Zhang Z, Hou X, Chen A. | Foods | 10.3390/foods11010062 | 2021 | ||
| Fermentation weight loss, fermentation quality, and bacterial community of ensiling of sweet sorghum with lactic acid bacteria at different silo densities. | Xu H, Wu N, Na N, Sun L, Zhao Y, Ding H, Fang Y, Wang T, Xue Y, Zhong J. | Front Microbiol | 10.3389/fmicb.2022.1013913 | 2022 | ||
| Red Beetroot Fermentation with Different Microbial Consortia to Develop Foods with Improved Aromatic Features. | Casciano F, Mayr H, Nissen L, Putti A, Zoli F, Gianotti A, Conterno L. | Foods | 10.3390/foods11193055 | 2022 | ||
| Comprehensive analysis of the metabolic and genomic features of tannin transforming Lactiplantibacillus plantarum strains. | Pulido-Mateos EC, Lessard-Lord J, Guyonnet D, Desjardins Y, Roy D. | Sci Rep | 10.1038/s41598-022-26005-4 | 2022 | ||
| Genetics | Putrescine Production by Latilactobacillus curvatus KP 3-4 Isolated from Fermented Foods. | Hirano R, Kume A, Nishiyama C, Honda R, Shirasawa H, Ling Y, Sugiyama Y, Nara M, Shimokawa H, Kawada H, Koyanagi T, Ashida H, Okuda S, Matsumoto M, Takagi H, Kurihara S. | Microorganisms | 10.3390/microorganisms10040697 | 2022 | |
| The C-Terminal Domain of Liquorilactobacillus nagelii Dextransucrase Mediates the Production of Larger Dextrans Compared to Liquorilactobacillus hordei. | Bechtner J, Hassler V, Wefers D, Ehrmann M, Jakob F. | Gels | 10.3390/gels8030171 | 2022 | ||
| Amine-Reactive BODIPY Dye: Spectral Properties and Application for Protein Labeling. | Ksenofontova KV, Kerner AA, Ksenofontov AA, Shagurin AY, Bocharov PS, Lukanov MM, Kayumov AR, Zhuravleva DE, Iskhakova ZI, Molchanov EE, Merkushev DA, Khodov IA, Marfin YS. | Molecules | 10.3390/molecules27227911 | 2022 | ||
| Phylogeny | Comparison of the Microbiome of Artisanal Homemade and Industrial Feta Cheese through Amplicon Sequencing and Shotgun Metagenomics. | Papadimitriou K, Anastasiou R, Georgalaki M, Bounenni R, Paximadaki A, Charmpi C, Alexandraki V, Kazou M, Tsakalidou E. | Microorganisms | 10.3390/microorganisms10051073 | 2022 | |
| Microbial Diversity and Contribution to the Formation of Volatile Compounds during Fine-Flavor Cacao Bean Fermentation. | Tigrero-Vaca J, Mariduena-Zavala MG, Liao HL, Prado-Lince M, Zambrano-Vera CS, Monserrate-Maggi B, Cevallos-Cevallos JM. | Foods | 10.3390/foods11070915 | 2022 | ||
| Reduction in Biogenic Amine Content in Baechu (Napa Cabbage) Kimchi by Biogenic Amine-Degrading Lactic Acid Bacteria. | Lee J, Jin YH, Pawluk AM, Mah JH. | Microorganisms | 10.3390/microorganisms9122570 | 2021 | ||
| Phylogeny | Bacterial Populations in International Artisanal Kefirs. | Sindi A, Badsha MB, Unlu G. | Microorganisms | 10.3390/microorganisms8091318 | 2020 | |
| Pathogenicity | Farm management practices and season dependent factors affect the microbial community and chemical profile of corn and grass-legume silages of farms in Ontario, Québec, and Northern New York. | Huffman J, Drouin P, Renaud JB, Duniere L, LaPointe G. | Front Microbiol | 10.3389/fmicb.2023.1214915 | 2023 | |
| Orange Juice and Yogurt Carrying Probiotic Bacillus coagulans GBI-30 6086: Impact of Intake on Wistar Male Rats Health Parameters and Gut Bacterial Diversity. | Almada-Erix CN, Almada CN, Cabral L, Barros de Medeiros VP, Roquetto AR, Santos-Junior VA, Fontes M, Goncalves AESS, Dos Santos A, Lollo PC, Magnani M, Sant'Ana AS. | Front Microbiol | 10.3389/fmicb.2021.623951 | 2021 | ||
| Metabolism | Genome-based selection and application of food-grade microbes for chickpea milk fermentation towards increased L-lysine content, elimination of indigestible sugars, and improved flavour. | Tangyu M, Fritz M, Aragao-Borner R, Ye L, Bogicevic B, Bolten CJ, Wittmann C. | Microb Cell Fact | 10.1186/s12934-021-01595-2 | 2021 | |
| Health-Promoting Properties of Lacticaseibacillus paracasei: A Focus on Kefir Isolates and Exopolysaccharide-Producing Strains. | Bengoa AA, Dardis C, Garrote GL, Abraham AG. | Foods | 10.3390/foods10102239 | 2021 | ||
| Genetics | Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage. | Heinl S, Wibberg D, Eikmeyer F, Szczepanowski R, Blom J, Linke B, Goesmann A, Grabherr R, Schwab H, Puhler A, Schluter A | J Biotechnol | 10.1016/j.jbiotec.2012.03.007 | 2012 | |
| Metabolism | Mousy off-flavor of wine: precursors and biosynthesis of the causative N-heterocycles 2-ethyltetrahydropyridine, 2-acetyltetrahydropyridine, and 2-acetyl-1-pyrroline by Lactobacillus hilgardii DSM 20176. | Costello PJ, Henschke PA | J Agric Food Chem | 10.1021/jf020341r | 2002 | |
| Biotechnology | Lactobacilli isolated from sugary kefir grains capable of polysaccharide production and minicell formation. | Pidoux M, Marshall VM, Zanoni P, Brooker B | J Appl Bacteriol | 10.1111/j.1365-2672.1990.tb01521.x | 1990 |
| #8606 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20176 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #34496 | ; Curators of the CIP; |
| #49934 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 30140 |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #119893 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103007 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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