Name: Lactobacillus jensenii 62G
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 6475

Type strain:

Species: Lactobacillus jensenii

Strain Designation: 62G

Culture col. no.: DSM 20557, ATCC 25258, JCM 15953, BCRC 12939, CCUG 21961, CCUG 35572, CECT 4306, CIP 69.17, JCM 1146, KCTC 3599, KCTC 5194, LMG 6414, NCFB 2165, NCIMB 13279, NRRL B-4550, NCDO 2165

Strain history: CIP <- 1969, F. Gasser, Inst. Pasteur, Paris, France: strain 62G

NCBI tax ID(s): 1423762 (strain), 109790 (species)

SI-ID 3316

LMG 6414, ATCC 25258, DSM 20557, JCM 1146, NCFB 2165, CCUG 21961, CCUG 35572, NCDO 2165, CCRC 12939, NCIMB 13279, CIP6917, CIP 69.17, CECT 4306, KCTC 3599, NRRL B-4550, BCRC 12939, KCTC 5194, JCM 15953

Other strains from Lactobacillus jensenii

L. jensenii 31.87, CIP 102788
L. jensenii 63AN, CIP 69.20, CCUG 35574, JCM ...
L. jensenii Mat, CIP 103764
L. jensenii 63AA, CIP 69.21
L. jensenii 63A, CIP 69.18, CCUG 35573, JCM ...
L. jensenii 66A, CIP 69.19
L. jensenii 60E, CIP 69.22
L. jensenii 62F, CIP 69.23, CCUG 69.23, JCM ...
L. jensenii 650.85, CIP 101792
L. jensenii 49-86, CIP 102132
L. jensenii 545.86, CIP 102564
L. jensenii CIP 110111, CIP 203072
L. jensenii CIP 110106
L. jensenii CCUG 31977
L. jensenii CCUG 38291
L. jensenii CCUG 38380 A
L. jensenii CCUG 38672
L. jensenii CCUG 38972
L. jensenii CCUG 42193
L. jensenii CCUG 43132
L. jensenii CCUG 43700
L. jensenii CCUG 44003
L. jensenii CCUG 44122
L. jensenii CCUG 44246
L. jensenii CCUG 44263
L. jensenii CCUG 44492
L. jensenii CCUG 44493
L. jensenii CCUG 44494
L. jensenii CCUG 44495
L. jensenii CCUG 44497
L. jensenii CCUG 44498
L. jensenii CCUG 44499
L. jensenii CCUG 44500
L. jensenii CCUG 48586
L. jensenii CCUG 48593
L. jensenii CCUG 48818
L. jensenii CCUG 49306
L. jensenii CCUG 51448
L. jensenii CCUG 64178
L. jensenii 61 I, CRBIP24.40
L. jensenii 20-74, CRBIP24.72
L. jensenii MAHE, CRBIP24.80

Section

Lactobacillus jensenii 62G is an anaerobe, Gram-positive human pathogen that was isolated from human vaginal discharge.

Gram-positive
anaerobe
human pathogen
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Lactobacillus*
	Species	**Lactobacillus jensenii**
	Full Scientific Name (LPSN)	Lactobacillus jensenii Gasser et al. 1970 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #120341]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %96.741

[Ref.: #120341]	Cell shape	rod-shaped

[Ref.: #120341]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %95.135

Information on culture and growth conditions Culture and growth conditions

[Ref.: #34917]

Culture medium

MEDIUM 40- for Lactobacillus and Leuconostoc

[Ref.: #34917]

Culture medium growth

[Ref.: #34917]

Culture medium composition

expand / minimize

[Ref.: #8907]

Culture medium

MRS pre-reduced (DSMZ Medium 11b)

[Ref.: #8907]

Culture medium growth

[Ref.: #8907]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #120341]

Culture medium

CIP Medium 40

[Ref.: #120341]

Culture medium growth

[Ref.: #120341]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #8907]		growth	30 °C
[Ref.: #34917]		growth	37 °C
[Ref.: #67770]		growth	37 °C
[Ref.: #120341]		growth	25-45 °C
[Ref.: #120341]	no	growth	15 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #8907]	Oxygen tolerance	anaerobe
[Ref.: #8907]	Oxygen tolerance	microaerophile

[Ref.: #69480]

Ability of spore formation

no Confidence in %97.958

[Ref.: #8907]	Murein short key	A11.31
[Ref.: #8907]	Murein types	A4alpha L-Lys-D-Asp

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fructose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-glucose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	esculin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #120341]	nitrate ChEBI	-	reduction
[Ref.: #120341]	nitrite ChEBI	-	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	salicin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	sucrose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	trehalose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #120341]		acetoin ChEBI	-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #120341]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #120341]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #120341]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #120341]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #120341]	oxidase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #8907]	14911	-	-	-	-	-	+/-	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	-	+	+	+	+	+	+	-	-	+	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-
[Ref.: #8907]	14703	-	-	-	-	-	-	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
[Ref.: #8907]	14702	-	-	-	-	-	+/-	-	-	-	-	+/-	+	+	+	-	-	-	-	-	-	-	-	-	+	+	+	+	+	+	-	-	+	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-
[Ref.: #8907]	14701	-	-	-	-	-	+/-	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	-	+	+	+	+	+	+	-	-	+	+	-	-	-	+/-	-	-	+/-	-	-	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #120341]	13158	-	+	-	-	-	+	-	-	-	-	+	+	-	-	-	+	+	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8907]	Sample type/isolated from	human vaginal discharge

[Ref.: #67770]	Sample type/isolated from	Human vaginal discharge

[Ref.: #120341]	Sample type/isolated from	Human, Vaginal discharge
* marker position based on {}

Isolation sources categories

#Host	#Human	#Female
#Host Body Product	#Urogenital tract	#Vaginal secretion

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF243176 (>99% sequence identity) for Lactobacillus from Microbeatlas

Aquatic Samples	1287
Soil Samples	816
Animal Samples	43559
Plant Samples	537
Total Samples	46199

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8907]	Pathogenicity (human)	yes, in single cases
[Ref.: #8907]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120341]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Lactobacillus jensenii strain ATCC25258 16S ribosomal RNA gene, partial sequence	AF243176	1496	GenBank ENA	109790 tax ID	*
[Ref.: #20218]	Lactobacillus jensenii ATCC 25258 16S ribosomal RNA gene, partial sequence	AF429513	504	GenBank ENA	109790 tax ID	*
[Ref.: #20218]	Lactobacillus jensenii strain ATCC 25258 16S ribosomal RNA gene, partial sequence; 16S-23S intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	AF429600	516	GenBank ENA	109790 tax ID	*
[Ref.: #20218]	Lactobacillus jensenii gene, 16S-23S rRNA intergenic spacer region and 23S rRNA gene 5' flanking region, partial sequence	AB035486	644	GenBank ENA	109790 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Lactobacillus jensenii DSM 20557	GCA_001436455	scaffold	GenBank ENA	1423762 tax ID
[Ref.: #66792]	Lactobacillus jensenii ATCC 25258	GCA_018094625	contig	GenBank ENA	109790 tax ID	*
[Ref.: #66792]	Lactobacillus jensenii DSM 20557	1423762.3	wgs	PATRIC	1423762 tax ID	*
[Ref.: #66792]	Lactobacillus jensenii strain ATCC 25258	109790.239	wgs	PATRIC	109790 tax ID	*
[Ref.: #66792]	Lactobacillus jensenii DSM 20557	2657245084	draft	JGI IMG/M	1423762 tax ID	*

[Ref.: #8907]	GC-content	36.1 mol%
[Ref.: #67770]	GC-content	34.33 mol%	genome sequence analysis
[Ref.: #67770]	GC-content	36.1 mol%	Buoyant density centrifugation (BD)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Lactobacillus jensenii DSM 20557 PATRIC: 1423762.3
[Ref.: #69480]	motile	no	95.135	no
[Ref.: #69480]	gram-positive	yes	96.741	no
[Ref.: #69480]	anaerobic	yes	81.648	no
[Ref.: #69480]	halophile	yes	75.763	no
[Ref.: #69480]	spore-forming	no	97.958	no
[Ref.: #69480]	glucose-util	yes	92.638	no
[Ref.: #69480]	thermophile	no	95.608	no
[Ref.: #69480]	aerobic	no	97.989	yes
[Ref.: #69480]	flagellated	no	98.113	no
[Ref.: #69480]	glucose-ferment	yes	91.854	no

Availability in culture collections External links

[Ref.: #8907]

Culture collection no.

DSM 20557, ATCC 25258, JCM 15953, BCRC 12939, CCUG 21961, CCUG 35572, CECT 4306, CIP 69.17, JCM 1146, KCTC 3599, KCTC 5194, LMG 6414, NCFB 2165, NCIMB 13279, NRRL B-4550, NCDO 2165

[Ref.: #75948]

SI-ID 3316

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	Engineering of Vaginal Lactobacilli to Express Fluorescent Proteins Enables the Analysis of Their Mixture in Nanofibers.	Stojanov S, Plavec TV, Kristl J, Zupancic S, Berlec A	Int J Mol Sci	10.3390/ijms222413631	2021	*
Phylogeny	Lactobacillus corticis sp. nov., isolated from hardwood bark.	Tohno M, Tanizawa Y, Kojima Y, Sakamoto M, Ohkuma M, Kobayashi H	Int J Syst Evol Microbiol	10.1099/ijsem.0.004882	2021	*
Metabolism	Effect of iron on the probiotic properties of the vaginal isolate Lactobacillus jensenii CECT 4306.	Martin R, Sanchez B, Urdaci MC, Langella P, Suarez JE, Bermudez-Humaran LG	Microbiology (Reading)	10.1099/mic.0.000044	2015	*
Phylogeny	Inhibitory effects of seaweed extracts on the growth of the vaginal bacterium Gardnerella vaginalis.	Ha YM, Choi JS, Lee BB, Moon HE, Cho KK, Choi IS	J Environ Biol		2014	*
Metabolism	Biosynthesis and degradation of H2O2 by vaginal lactobacilli.	Martin R, Suarez JE	Appl Environ Microbiol	10.1128/AEM.01631-09	2009	*
Enzymology	Development of antioxidant activity in milk whey during fermentation with lactic acid bacteria.	Virtanen T, Pihlanto A, Akkanen S, Korhonen H	J Appl Microbiol	10.1111/j.1365-2672.2006.03072.x	2007	*
Phylogeny	Lactobacillus fornicalis sp. nov., isolated from the posterior fornix of the human vagina.	Dicks LM, Silvester M, Lawson PA, Collins MD	Int J Syst Evol Microbiol	10.1099/00207713-50-3-1253	2000	*

References

#8907

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20557

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#34917 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#75948

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID3316.1 )

#120341 Collection of Institut Pasteur ; Curators of the CIP; CIP 69.17
* These data were automatically processed and therefore are not curated

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Lactobacillus jensenii DSM 20557

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