Fructilactobacillus fructivorans (DSM 20607, ATCC 27394, NCDO 1985)

Name: Fructilactobacillus fructivorans (DSM 20607, ATCC 27394, NCDO 1985)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6464

Type strain

Culture col. no. DSM 20607 ATCC 27394 NCDO 1985

NCBI tax ID(s) 1614

Special Collections DSMZ

History <- NCDO <- R.E. Kunkee

Links

Fructilactobacillus fructivorans DSM 20607 is a mesophilic prokaryote that was isolated from wine.

mesophilic genome sequence

Name and taxonomic classification

SI-ID 9753

LMG 11442,NCFB 1985,LMG 18522,ATCC 27394,DSM 20607,LMG 13092,LMG 18879,NCDO 1985,NCIMB 701985,LMG 23666

@ref 20215

Last LPSN update 2026-02-09 11:19:13

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Fructilactobacillus

Species Fructilactobacillus fructivorans

Full scientific name Fructilactobacillus fructivorans (Charlton et al. 1934) Zheng et al. 2020

Synonyms (4)

Lactobacillus fructivorans
Lactobacillus heterohiochii
Lactobacillus trichodes
Lactobacillus homohiochii

BacDive ID	Other strains from **Fructilactobacillus fructivorans** (5)	Type strain
6461	F. fructivorans CCUG 32260, NCIMB 8039, JCM 1117, IFO 13954, ... (type strain)
6463	F. fructivorans H1, DSM 20350, ATCC 15435, JCM 1198, NRIC ...
6474	F. fructivorans H42, CCUG 32247, LMG 9478, IAM H42, CIP 103141, ...
172824	F. fructivorans W1, CRBIP24.176
172825	F. fructivorans W2, CRBIP24.177

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	positive	91.445

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
8955	KUNKEE MEDIUM (DSMZ Medium 368)		Medium recipe at MediaDive	Name: KUNKEE MEDIUM (DSMZ Medium 368) Composition: Tryptone 20.0 g/l Glucose 5.0 g/l Yeast extract 5.0 g/l Peptone 5.0 g/l Tween 80 Tomato juice Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
8955	positive	growth	25	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	microaerophile	97.7

Spore formation

@ref	Spore formation	Confidence
125438		90.277

Murein

@ref	Murein short key	Type
8955	A11.31	A4alpha L-Lys-D-Asp

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	coenzyme A metabolism	100	4 of 4
66794	acetate fermentation	100	4 of 4
66794	teichoic acid biosynthesis	100	1 of 1
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	palmitate biosynthesis	100	22 of 22
66794	suberin monomers biosynthesis	100	2 of 2
66794	folate polyglutamylation	100	1 of 1
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	ethanol fermentation	100	2 of 2
66794	ppGpp biosynthesis	100	4 of 4
66794	peptidoglycan biosynthesis	80	12 of 15
66794	aspartate and asparagine metabolism	77.78	7 of 9
66794	vitamin B1 metabolism	76.92	10 of 13
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	photosynthesis	71.43	10 of 14
66794	phenylalanine metabolism	69.23	9 of 13
66794	acetoin degradation	66.67	2 of 3
66794	formaldehyde oxidation	66.67	2 of 3
66794	CO2 fixation in Crenarchaeota	66.67	6 of 9
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	glycolysis	64.71	11 of 17
66794	pentose phosphate pathway	63.64	7 of 11
66794	ketogluconate metabolism	62.5	5 of 8
66794	degradation of sugar alcohols	62.5	10 of 16
66794	C4 and CAM-carbon fixation	62.5	5 of 8
66794	NAD metabolism	61.11	11 of 18
66794	threonine metabolism	60	6 of 10
66794	glycogen metabolism	60	3 of 5
66794	glycine betaine biosynthesis	60	3 of 5
66794	purine metabolism	58.51	55 of 94
66794	pyrimidine metabolism	57.78	26 of 45
66794	serine metabolism	55.56	5 of 9
66794	valine metabolism	55.56	5 of 9
66794	sulfopterin metabolism	50	2 of 4
66794	butanoate fermentation	50	2 of 4
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	adipate degradation	50	1 of 2
66794	gluconeogenesis	50	4 of 8
66794	non-pathway related	50	19 of 38
66794	glutamate and glutamine metabolism	46.43	13 of 28
66794	methionine metabolism	46.15	12 of 26
66794	urea cycle	46.15	6 of 13
66794	d-mannose degradation	44.44	4 of 9
66794	glutathione metabolism	42.86	6 of 14
66794	oxidative phosphorylation	42.86	39 of 91
66794	propanol degradation	42.86	3 of 7
66794	mevalonate metabolism	42.86	3 of 7
66794	isoprenoid biosynthesis	42.31	11 of 26
66794	lipid metabolism	41.94	13 of 31
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	flavin biosynthesis	40	6 of 15
66794	ethylmalonyl-CoA pathway	40	2 of 5
66794	methylglyoxal degradation	40	2 of 5
66794	propionate fermentation	40	4 of 10
66794	arachidonate biosynthesis	40	2 of 5
66794	Entner Doudoroff pathway	40	4 of 10
66794	degradation of pentoses	39.29	11 of 28
66794	leucine metabolism	38.46	5 of 13
66794	lysine metabolism	38.1	16 of 42
66794	isoleucine metabolism	37.5	3 of 8
66794	dTDPLrhamnose biosynthesis	37.5	3 of 8
66794	arginine metabolism	37.5	9 of 24
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	37.5	3 of 8
66794	tryptophan metabolism	36.84	14 of 38
66794	d-xylose degradation	36.36	4 of 11
66794	tetrahydrofolate metabolism	35.71	5 of 14
66794	citric acid cycle	35.71	5 of 14
66794	degradation of hexoses	33.33	6 of 18
66794	cyanate degradation	33.33	1 of 3
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	sphingosine metabolism	33.33	2 of 6
66794	octane oxidation	33.33	1 of 3
66794	cysteine metabolism	33.33	6 of 18
66794	IAA biosynthesis	33.33	1 of 3
66794	alanine metabolism	31.03	9 of 29
66794	histidine metabolism	31.03	9 of 29
66794	glycine metabolism	30	3 of 10
66794	ubiquinone biosynthesis	28.57	2 of 7
66794	tyrosine metabolism	28.57	4 of 14
66794	reductive acetyl coenzyme A pathway	28.57	2 of 7
66794	proline metabolism	27.27	3 of 11
66794	glycogen biosynthesis	25	1 of 4
66794	catecholamine biosynthesis	25	1 of 4
66794	androgen and estrogen metabolism	25	4 of 16
66794	carnitine metabolism	25	2 of 8
66794	lactate fermentation	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	nitrate assimilation	22.22	2 of 9
66794	chorismate metabolism	22.22	2 of 9
66794	lipid A biosynthesis	22.22	2 of 9
66794	heme metabolism	21.43	3 of 14

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	#Beverage
#Engineered	#Food production	#Fermented
#Host	#Plants	#Shrub (Scrub)
#Host Body-Site	#Plant	#Fruit (Seed)

Isolation

8955

Sample typewine

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
8955	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM143717v1 assembly for Fructilactobacillus fructivorans ATCC 27394	scaffold	GCA_001437175	1614.11	2667528067	1614	73.4

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Fructilactobacillus fructivorans ATCC 27394
NCBI: GCA_001437175

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	85.90	no
125439	motility	BacteriaNetⓘ	no	72.50	no
125439	gram_stain	BacteriaNetⓘ	positive	84.60	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	97.70	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Fructilactobacillus fructivorans ATCC 27394
NCBI: GCA_001437175.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	91.45	no
125438	anaerobic	anaerobicⓘ	no	77.30	no
125438	aerobic	aerobicⓘ	no	92.11	no
125438	spore-forming	spore-formingⓘ	no	90.28	no
125438	thermophilic	thermophileⓘ	no	92.77	yes
125438	flagellated	motile2+ⓘ	no	88.00	no

Literature

References

#8955	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20607
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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