Delftia acidovorans (DSM 50053, ATCC 17406, ICPB 2701-24)

Name: Delftia acidovorans (DSM 50053, ATCC 17406, ICPB 2701-24)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2947

Type strain

Strain Designation 4B

Culture col. no. DSM 50053 ATCC 17406 ICPB 2701-24 CCUG 15340 LMG 1790 1 more

NCBI tax ID(s) 80866

Special Collections DSMZ CCUG

History <- ICPB <- IAM <- M. Yano, 4B (Pseudomonas desmolytica)

Links

Delftia acidovorans 4B is a bacterium that was isolated from soil, enrichment with p-hydroxybenzoate.

Bacteria

Name and taxonomic classification

SI-ID 1995

LMG 1790,ATCC 17406,CCUG 15340,DSM 50053

@ref 20215

Last LPSN update 2026-02-09 11:18:23

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Comamonadaceae

Genus Delftia

Species Delftia acidovorans

Full scientific name Delftia acidovorans (den Dooren de Jong 1926) Wen et al. 1999

Synonyms (2)

Comamonas acidovorans
Pseudomonas acidovorans

BacDive ID	Other strains from **Delftia acidovorans** (47)	Type strain
2941	D. acidovorans 2167, 7, DSM 39, ATCC 15668, DSM 50251, JCM ... (type strain)
2940	D. acidovorans D, DSM 1621
2944	D. acidovorans SPB1, DSM 12586
2945	D. acidovorans SPH-1, DSM 14801
2946	D. acidovorans NAT, DSM 17854
2948	D. acidovorans RYS-4, DSM 50057, ICPB 2785-105
100614	D. acidovorans STI05007(IMET), pStrIII, Str.III,
134419	D. acidovorans CIP 103685, ATCC 43868
134786	D. acidovorans CIP 64.36, ATCC 9355, CCM 283, LMG 1801, ...
134909	D. acidovorans CIP 102740
136064	D. acidovorans 211-86, CIP 102239
138467	D. acidovorans CIP 60.79, ATCC 17438, LMG 5931, NCTC 9991, ...
138496	D. acidovorans CIP 60.78, ATCC 17439, NBIMCC 508
138679	D. acidovorans CIP 101917
141204	D. acidovorans CCUG 178 B, LMG 7097
141230	D. acidovorans CCUG 274 B, LMG 7098
141422	D. acidovorans CCUG 1686
141508	D. acidovorans CCUG 2485, LMG 1795
141519	D. acidovorans CCUG 2523, NRRL B-979, NCTC 2578
142852	D. acidovorans CCUG 15338, NCPPB 1968, ATCC 15005, JCM 6207, ...
144259	D. acidovorans CCUG 24015, LMG 2842
145983	D. acidovorans CCUG 30088
146359	D. acidovorans CCUG 31021
146866	D. acidovorans CCUG 32317
147311	D. acidovorans CCUG 33351
147452	D. acidovorans CCUG 33603
148063	D. acidovorans CCUG 34751
149688	D. acidovorans CCUG 38188 B
150058	D. acidovorans CCUG 38929
152266	D. acidovorans CCUG 46253
152274	D. acidovorans CCUG 46300
154626	D. acidovorans CCUG 54618
154717	D. acidovorans CCUG 54958
155020	D. acidovorans CCUG 56121
156752	D. acidovorans CCUG 64810
157329	D. acidovorans IMI 366616
160893	D. acidovorans JCM 10181
163415	D. acidovorans JCM 2784
165362	D. acidovorans JCM 6208, IAM 14412
165365	D. acidovorans JCM 6211, IAM 14413
165366	D. acidovorans JCM 6212, IAM 14414
165367	D. acidovorans JCM 6213, IAM 14415
165368	D. acidovorans JCM 6214, IAM 14416, IAM 1461
165369	D. acidovorans JCM 6215, IAM 14417, IAM 1482
165370	D. acidovorans JCM 6216, IAM 1492
165371	D. acidovorans JCM 6217, IAM 14418
165378	D. acidovorans JCM 6232

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
12609	NUTRIENT AGAR (DSMZ Medium 1)		Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
12609	positive	growth	30

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	+	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68369	gelatinase	-		from API 20NE
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
68382	trypsin	-	3.4.21.4	from API zym
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
46229	-	-	+	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
46229	+	-	-	-	-	-	-	-	-	-	-	+	-	-	+	+	+	+	+	+	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

12609

Sample typesoil, enrichment with p-hydroxybenzoate

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
12609	yes, in single cases	1	Risk group (German classification) According to TRBA 466

Sequence information

GC content

@ref	GC-content (mol%)	Method
12609	68.4	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Literature

References

#12609	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 50053
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#46229	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 15340
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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