Name: Delftia acidovorans SPH-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 2945

Type strain:

Species: Delftia acidovorans

Strain Designation: SPH-1

Culture col. no.: DSM 14801

Strain history: <- D. Schleheck; SPH-1

NCBI tax ID(s): 80866 (species)

Other strains from Delftia acidovorans

Section

Delftia acidovorans SPH-1 is a mesophilic human pathogen that was isolated from sludge from communal sewage treatment plant.

human pathogen
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Comamonadaceae*
	Genus	*Delftia*
	Species	**Delftia acidovorans**
	Full Scientific Name (PNU)	Delftia acidovorans (den Dooren de Jong 1926) Wen et al. 1999

	Synonym	Pseudomonas acidovorans
	Synonym	Comamonas acidovorans

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5551]

Culture medium

REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a)

[Ref.: #5551]

Culture medium growth

[Ref.: #5551]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #5551]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5551]			growth	30 °C

[Ref.: #5551]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5551]	Sample type/isolated from	sludge from communal sewage treatment plant
[Ref.: #5551]	Geographic location (country and/or sea, region)	Constance
[Ref.: #5551]	Country	Germany
[Ref.: #5551]	Country ISO 3 Code	DEU
[Ref.: #5551]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered	#Waste	#Water treatment plant
#Environmental	#Terrestrial	#Mud (Sludge)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5551]	Pathogenicity (human)	yes, in single cases
[Ref.: #5551]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Delftia acidovorans SPH-1 SPH-1	GCA_000018665	complete	GenBank	398578 tax ID	*
[Ref.: #66792]	Delftia acidovorans SPH-1	398578.5	complete	PATRIC	398578 tax ID	*
[Ref.: #66792]	Delftia acidovorans strain FDAARGOS_891 strain Not applicable	80866.55	complete	PATRIC	80866 tax ID	*
[Ref.: #66792]	Delftia acidovorans SPH-1	641228489	complete	JGI IMG/M	398578 tax ID	*
[Ref.: #66792]	Bacteroides caccae BIOML-A19	GCA_008572585	contig	PATRIC	47678 tax ID	*
[Ref.: #66792]	Bordetella pertussis NZ26	GCA_022407655	complete	PATRIC	520 tax ID	*

Availability in culture collections External links

[Ref.: #5551]

Culture collection no.

DSM 14801

[Ref.: #20218]

Associated Passport(s) in StrainInfo

534121

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Mineralization of individual congeners of linear alkylbenzenesulfonate by defined pairs of heterotrophic bacteria.	Schleheck D, Knepper TP, Fischer K, Cook AM	Appl Environ Microbiol	10.1128/AEM.70.7.4053-4063.2004	2004	*
Enzymology	Bacterial sulfite dehydrogenases in organotrophic metabolism: separation and identification in Cupriavidus necator H16 and in Delftia acidovorans SPH-1.	Denger K, Weinitschke S, Smits THM, Schleheck D, Cook AM	Microbiology (Reading)	10.1099/mic.0.2007/011650-0	2008	*
Metabolism	Different bacterial strategies to degrade taurocholate.	Rosch V, Denger K, Schleheck D, Smits TH, Cook AM	Arch Microbiol	10.1007/s00203-008-0357-7	2008	*
Pathogenicity	New mobile genetic elements in Cupriavidus metallidurans CH34, their possible roles and occurrence in other bacteria.	Van Houdt R, Monchy S, Leys N, Mergeay M	Antonie Van Leeuwenhoek	10.1007/s10482-009-9345-4	2009	*
Enzymology	Purification, characterization and amino acid sequence of a novel enzyme, D-threo-3-hydroxyaspartate dehydratase, from Delftia sp. HT23.	Maeda T, Takeda Y, Murakami T, Yokota A, Wada M	J Biochem	10.1093/jb/mvq106	2010	*
Metabolism	Molecular characterisation of phaCAB from Comamonas sp. EB172 for functional expression in Escherichia coli JM109.	Yee LN, Chuah JA, Chong ML, Phang LY, Raha AR, Sudesh K, Hassan MA	Microbiol Res	10.1016/j.micres.2011.12.006	2012	*
Genetics	The Source and Evolutionary History of a Microbial Contaminant Identified Through Soil Metagenomic Analysis.	Olm MR, Butterfield CN, Copeland A, Boles TC, Thomas BC, Banfield JF	mBio	10.1128/mBio.01969-16	2017	*
	Lead Drives Complex Dynamics of a Conjugative Plasmid in a Bacterial Community.	Cyriaque V, Madsen JS, Fievez L, Leroy B, Hansen LH, Bureau F, Sorensen SJ, Wattiez R	Front Microbiol	10.3389/fmicb.2021.655903	2021	*

References

#5551

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14801

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Delftia acidovorans in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF