Acetivibrio thermocellus | Type strain | DSM 1237, ATCC 27405, JCM 9322, NCIMB 10682

Strain identifier

BacDive ID: 2729

Type strain:

Species: Acetivibrio thermocellus

Culture col. no.: DSM 1237, ATCC 27405, JCM 9322, NCIMB 10682

Strain history: <- NCIB <- G. Hobbs, Torry Research Station, Aberdeen, U.K. <- R. H. McBee, Montana State Univ., Bozeman, USA

Section

Name and taxonomic classification
Culture and growth conditions
Physiology and metabolism
Safety information
Sequence information

External links

Acetivibrio thermocellus DSM 1237 is an anaerobe, spore-forming, thermophilic bacterium of the family Hungateiclostridiaceae.

spore-forming
anaerobe
thermophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification.Name and taxonomic classification

	Last LPSN update	23-11-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Firmicutes
	Class	Clostridia
	Order	Eubacteriales
	Family	Oscillospiraceae
	Genus	Acetivibrio
	Species	Acetivibrio thermocellus
	Full Scientific Name (PNU)	Acetivibrio thermocellus (Viljoen et al. 1926) Tindall 2019

	Synonym	Clostridium thermocellum
	Synonym	Hungateiclostridium thermocellum

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #545]

Culture medium

HUNGATEICLOSTRIDIUM MEDIUM (DSMZ Medium 122), anaerobic

[Ref.: #545]

Culture medium growth

[Ref.: #545]

Culture medium link

medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #545]			growth	55 ̊C
[Ref.: #22909]			growth	60 ̊C

[Ref.: #545]	Temperature range	thermophilic
[Ref.: #22909]	Temperature range	thermophilic

Information on physiology and metabolismPhysiology and metabolism

[Ref.: #545]

Oxygen tolerance

anaerobe

[Ref.: #22909]

Ability of spore formation

yes

[Ref.: #545]	Name of produced compound	restriction endonuclease CthI
[Ref.: #545]	Name of produced compound	restriction endonuclease CthII
[Ref.: #545]	Name of produced compound	restriction endonucleases CthI, CthII

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #22909]	cellulose ChEBI	+	builds acid from
[Ref.: #22909]	fructose ChEBI	-	builds acid from
[Ref.: #22909]	glucose ChEBI	-	builds acid from
[Ref.: #22909]	mannitol ChEBI	-	builds acid from
[Ref.: #22909]	starch ChEBI	-	builds acid from
[Ref.: #22909]	sucrose ChEBI	-	builds acid from

Information on possible application of the strain and its possible interaction with e.g. potential hostsSafety information

[Ref.: #545]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassSequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Clostridium thermocellum (DSM 1237) 16S ribosomal RNA (16S rRNA) gene	L09173	1509	ENA	1515 tax ID	*
[Ref.: #20218]	Clostridium thermocellum gene for 16S ribosomal RNA, partial sequence, strain: JCM 9322	AB558166	1489	ENA	1515 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Hungateiclostridium thermocellum ATCC 27405	GCA_000015865	complete	GenBank	203119 tax ID
[Ref.: #66792]	Hungateiclostridium thermocellum LQRI	GCA_900215405	contig	GenBank	1515 tax ID
[Ref.: #66792]	Hungateiclostridium thermocellum PAL5	GCA_004803955	contig	GenBank	1515 tax ID
[Ref.: #66792]	Hungateiclostridium thermocellum UBA8863	GCA_003514585	scaffold	GenBank	1515 tax ID
[Ref.: #66792]	Hungateiclostridium thermocellum AS02xzSISU_19	GCA_012719765	contig	GenBank	1515 tax ID
[Ref.: #66792]	Clostridium thermocellum ATCC 27405	203119.11	complete	PATRIC	203119 tax ID
[Ref.: #66792]	Hungateiclostridium thermocellum strain PAL5	1515.10	wgs	PATRIC	1515 tax ID
[Ref.: #66792]	Hungateiclostridium thermocellum strain UBA8863	1515.8	wgs	PATRIC	1515 tax ID
[Ref.: #66792]	Ruminiclostridium thermocellum strain BL21	1515.7	plasmid	PATRIC	1515 tax ID
[Ref.: #66792]	Ruminiclostridium thermocellum strain BL21	1515.6	plasmid	PATRIC	1515 tax ID
[Ref.: #66792]	Ruminiclostridium thermocellum strain BL21	1515.5	plasmid	PATRIC	1515 tax ID
[Ref.: #66792]	Ruminiclostridium thermocellum strain LQRI	1515.4	wgs	PATRIC	1515 tax ID
[Ref.: #66792]	Hungateiclostridium thermocellum LQRI	2639763201	permanent	JGI IMG/M	1515 tax ID
[Ref.: #66792]	Hungateiclostridium thermocellum ATCC 27405	640069309	complete	JGI IMG/M	203119 tax ID
[Ref.: #66792]	Hungateiclostridium thermocellum LQRI (v2)	2642422538	permanent	JGI IMG/M	1515 tax ID

[Ref.: #22909]

GC-content

38 mol%

Availability in culture collectionsExternal links

[Ref.: #545]

Culture collection no.

DSM 1237, ATCC 27405, JCM 9322, NCIMB 10682

[Ref.: #20218]

Associated Passport(s) in StrainInfo

40681, 40680, 401406, 157216

References

#545	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 1237

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#22909

Shuangya Chen, Lili Niu, Yongxiang Zhang: Saccharofermentans acetigenes gen. nov., sp. nov., an anaerobic bacterium isolated from sludge treating brewery wastewater. IJSEM 60: 2735 - 2738 2010 ( DOI 10.1099/ijs.0.017590-0 , PubMed 20061495 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These References are textmined

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