Name: Flavobacterium columnare ALG-00-530
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 24020

Type strain:

Species: Flavobacterium columnare

Strain Designation: ALG-00-530

Culture col. no.: DSM 25092, CECT 7586

Strain history: <- C. Arias, Auburn University, USA; ALG-00-530

NCBI tax ID(s): 996 (species)

SI-ID 371227

CECT 7586

Special Collections

DSMZ

Other strains from Flavobacterium columnare

Section

Flavobacterium columnare ALG-00-530 is an animal pathogen that was isolated from channel catfish.

animal pathogen
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Flavobacterium*
	Species	**Flavobacterium columnare**
	Full Scientific Name (LPSN)	Flavobacterium columnare (Bernardet and Grimont 1989 ex Davis 1922) Bernardet et al. 1996

	Synonym	Cytophaga columnaris
	Synonym	Flexibacter columnaris

Information on culture and growth conditions Culture and growth conditions

[Ref.: #20520]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #20520]

Culture medium growth

[Ref.: #20520]

Culture medium link

Medium recipe at MediaDive

[Ref.: #20520]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #20520]			growth	28 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #20520]	Sample type/isolated from	channel catfish
[Ref.: #20520]	Geographic location (country and/or sea, region)	Alabama
[Ref.: #20520]	Country	USA
[Ref.: #20520]	Country ISO 3 Code	USA
[Ref.: #20520]	Continent	North America
* marker position based on {}

Isolation sources categories

#Host

#Fishes

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #20520]	Pathogenicity (animal)	yes
[Ref.: #20520]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Availability in culture collections External links

[Ref.: #20520]

Culture collection no.

DSM 25092, CECT 7586

[Ref.: #87994]

SI-ID 371227

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Influence of native catfish mucus on Flavobacterium columnare growth and proteolytic activity.	Shoemaker CA, LaFrentz BR, Peatman E, Beck BH	J Fish Dis	10.1111/jfd.12833	2018	*
Metabolism	Comparison of lipopolysaccharide and protein profiles between Flavobacterium columnare strains from different genomovars.	Zhang Y, Arias CR, Shoemaker CA, Klesius PH	J Fish Dis	10.1111/j.1365-2761.2006.00760.x	2006	*
	Flavobacterium columnare genomovar influences mortality in channel catfish (Ictalurus punctatus).	Shoemaker CA, Olivares-Fuster O, Arias CR, Klesius PH	Vet Microbiol	10.1016/j.vetmic.2007.09.003	2007	*
	Immunization of eyed channel catfish, Ictalurus punctatus, eggs with monovalent Flavobacterium columnare vaccine and bivalent F. columnare and Edwardsiella ictaluri vaccine.	Shoemaker CA, Klesius PH, Evans JJ	Vaccine	10.1016/j.vaccine.2006.09.055	2006	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20520

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25092

#87994

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID371227.1 )

* These data were automatically processed and therefore are not curated

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