Workshop and Q&A October 6th

Strain identifier

BacDive ID: 5551

Type strain: Yes

Species: Flavobacterium columnare

Strain Designation: 1-S-2cl (Anacker 1956)

Culture col. no.: DSM 18644, ATCC 23463, CIP 103531, JCM 21141, LMG 10406, LMG 13035, NBRC 100251, NCIMB 2248, IAM 14301, NCMB 1038

Strain history: IAM 14301 <-- NCIMB 2248 <-- E. J. Ordal I-S-2cl.

NCBI tax ID(s): 1218111 (strain), 996 (species)

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Flavobacterium columnare 1-S-2cl is a psychrophilic, motile, rod-shaped animal pathogen that forms rhizoid colonies and was isolated from Kidney of diseased salmon.

  1. colony-forming
  2. motile
  3. rod-shaped
  4. animal pathogen
  5. psychrophilic
  6. 16S sequence
  7. Bacteria
  8. genome sequence
  • Availability in culture collections External linksarrow_down
  • [Ref.: #7633] Culture collection no. DSM 18644, ATCC 23463, CIP 103531, JCM 21141, LMG 10406, LMG 13035, NBRC 100251, NCIMB 2248, IAM 14301, NCMB 1038
    [Ref.: #20218] Associated Passport(s) in StrainInfo 692146, 38744, 151142, 719161, 38743, 38745, 490702, 38747
    Literature: Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries.
    Titlearrow to sort Authorsarrow to sort Journalarrow to sort DOIarrow to sort Yeararrow to sort Mesharrow to sort arrow to sort arrow to sort
    Systemic and mucosal antibody response in tilapia, Oreochromis niloticus (L.), following immunization with Flavobacterium columnare. Grabowski LD, LaPatra SE, Cain KD J Fish Dis 10.1111/j.1365-2761.2004.00576.x 2004 Animals, Antibodies, Bacterial/blood, Antibody Formation/*immunology, Cichlids/*immunology, Enzyme-Linked Immunosorbent Assay/veterinary, *Flavobacterium, Freund's Adjuvant/immunology, Immersion, Immunity, Mucosal/*immunology, Immunization/*veterinary, Injections, Intraperitoneal/veterinary, Time Factors *
    Flavobacterium saliperosum sp. nov., isolated from freshwater lake sediment. Wang ZW, Liu YH, Dai X, Wang BJ, Jiang CY, Liu SJ Int J Syst Evol Microbiol 10.1099/ijs.0.64065-0 2006 Bacterial Typing Techniques, China, DNA, Bacterial/analysis, DNA, Ribosomal/analysis, Flavobacterium/*classification/genetics/*isolation & purification/physiology, Fresh Water/*microbiology, Genes, rRNA, Geologic Sediments/*microbiology, Molecular Sequence Data, Phenotype, Phylogeny, Pigmentation, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA Phylogeny Genetics *
    Molecular diversity and growth features of Flavobacterium columnare strains isolated in Finland. Suomalainen LR, Kunttu H, Valtonen ET, Hirvela-Koski V, Tiirola M Dis Aquat Organ 10.3354/dao070055 2006 Animals, DNA, Ribosomal Spacer/genetics, Finland, Fish Diseases/*microbiology, Flavobacteriaceae Infections/microbiology/*veterinary, Flavobacterium/drug effects/*genetics/*growth & development/isolation & purification, *Genetic Variation, Hydrogen-Ion Concentration, Microbial Sensitivity Tests, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Sodium Chloride, Temperature Phylogeny Genetics *
    Flavobacterium terrae sp. nov. and Flavobacterium cucumis sp. nov., isolated from greenhouse soil. Weon HY, Song MH, Son JA, Kim BY, Kwon SW, Go SJ, Stackebrandt E Int J Syst Evol Microbiol 10.1099/ijs.0.64935-0 2007 Aerobiosis, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Flavobacterium/chemistry/*classification/genetics/*isolation & purification, Genes, rRNA, Korea, Molecular Sequence Data, Phylogeny, Quinones/analysis, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sequence Homology, Nucleic Acid, *Soil Microbiology Phylogeny Genetics *
    Improved method for determining antibiotic susceptibility of Flavobacterium columnare isolates by broth microdilution. Darwish AM, Farmer BD, Hawke JP J Aquat Anim Health 10.1577/H07-047.1 2008 Animals, Anti-Bacterial Agents/*pharmacology, Colony Count, Microbial/veterinary, Culture Media, Dose-Response Relationship, Drug, *Drug Resistance, Bacterial, Fish Diseases/*drug therapy/microbiology, Fishes, Flavobacteriaceae Infections/drug therapy/microbiology/*veterinary, Flavobacterium/*drug effects/genetics/growth & development, Genotype, Microbial Sensitivity Tests/methods/standards/veterinary, Temperature, Time Factors, Treatment Outcome Cultivation Genetics *
    Improving survival and storage stability of bacteria recalcitrant to freeze-drying: a coordinated study by European culture collections. Peiren J, Buyse J, De Vos P, Lang E, Clermont D, Hamon S, Begaud E, Bizet C, Pascual J, Ruvira MA, Macian MC, Arahal DR Appl Microbiol Biotechnol 10.1007/s00253-015-6476-6 2015 Bacterial Physiological Phenomena/*radiation effects, Biological Specimen Banks, Freeze Drying/*methods, Microbial Viability/*radiation effects, Preservation, Biological/*methods *
    Prophages and Past Prophage-Host Interactions Revealed by CRISPR Spacer Content in a Fish Pathogen. Laanto E, Ravantti JJ, Sundberg LR Microorganisms 10.3390/microorganisms8121919 2020 Pathogenicity *
    The fish pathogen Flavobacterium columnare represents four distinct species: Flavobacterium columnare, Flavobacterium covae sp. nov., Flavobacterium davisii sp. nov. and Flavobacterium oreochromis sp. nov., and emended description of Flavobacterium columnare. LaFrentz BR, Kralova S, Burbick CR, Alexander TL, Phillips CW, Griffin MJ, Waldbieser GC, Garcia JC, de Alexandre Sebastiao F, Soto E, Loch TP, Liles MR, Snekvik KR Syst Appl Microbiol 10.1016/j.syapm.2021.126293 2021 Animals, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, *Fatty Acids/analysis, *Flavobacterium, Nucleic Acid Hybridization, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA Phylogeny Transcriptome *

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