Name: Flavobacterium columnare LSU
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 137085

Type strain:

Species: Flavobacterium columnare

Strain Designation: LSU

Culture col. no.: CIP 110012

Strain history: CIP <- 2009, C.R. Arias, Auburn Univ., Alabama, USA: strain LSU

NCBI tax ID(s): 996 (species)

SI-ID 395560

CIP 110012

Special Collections

Other strains from Flavobacterium columnare

Section

Flavobacterium columnare LSU is a Gram-negative, rod-shaped bacterium of the family Flavobacteriaceae.

Gram-negative
rod-shaped
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Flavobacterium*
	Species	**Flavobacterium columnare**
	Full Scientific Name (LPSN)	Flavobacterium columnare (Bernardet and Grimont 1989 ex Davis 1922) Bernardet et al. 1996

	Synonym	Cytophaga columnaris
	Synonym	Flexibacter columnaris

Information on morphological and physiological properties Morphology

[Ref.: #36936]	Gram stain	negative

[Ref.: #36936]	Cell shape	rod-shaped

[Ref.: #36936]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #36936]

Culture medium

MEDIUM 566- Reasoner's 2A agar for Flavobacterium micromati

[Ref.: #36936]

Culture medium growth

[Ref.: #36936]

Culture medium composition

expand / minimize

[Ref.: #36936]

Culture medium

CIP Medium 566

[Ref.: #36936]

Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #36936]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #36936]		nitrate ChEBI	+	reduction
[Ref.: #36936]		nitrite ChEBI	-	reduction

	Metabolite production	Metabolite	Production
[Ref.: #36936]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #36936]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #36936]	oxidase	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #36936]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #36936]	12287	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #36936]	Sample type/isolated from	Animal, Catfish, Ictalurus punctatus
[Ref.: #36936]	Geographic location (country and/or sea, region)	Louisiana
[Ref.: #36936]	Country	United States of America
[Ref.: #36936]	Country ISO 3 Code	USA
[Ref.: #36936]	Continent	North America
[Ref.: #36936]	Isolation date	1999

[Ref.: #36936]	Geographic location (country and/or sea, region)	Louisiana
[Ref.: #36936]	Country	USA
[Ref.: #36936]	Country ISO 3 Code	USA
[Ref.: #36936]	Continent	North America
* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #36936]

Biosafety level

Risk group (French classification)

Availability in culture collections External links

[Ref.: #36936]

Culture collection no.

CIP 110012

[Ref.: #94059]

SI-ID 395560

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#36936 Collection of Institut Pasteur ; Curators of the CIP; CIP 110012

#68382

Automatically annotated from API zym .

#94059

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID395560.1 )

* These data were automatically processed and therefore are not curated

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