Brevibacterium casei (DSM 20658, NCDO 2051, R6)

Name: Brevibacterium casei (DSM 20658, NCDO 2051, R6)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1835

Type strain

Strain Designation R6

Culture col. no. DSM 20658 NCDO 2051 R6 NCIMB 702051 KCTC 3088 1 more

NCBI tax ID(s) 33889

Special Collections DSMZ JCM KCTC

History <- NCDO <- NIRD, R6 NCDO 2051 <-- M. E. Sharpe R6.

Links

Brevibacterium casei R6 is a mesophilic prokaryote that was isolated from raw milk.

mesophilic genome sequence

Name and taxonomic classification

SI-ID 46866

ATCC 49088,NCDO 2051,DSM 20658,JCM 2597,KCTC 3088,NCIMB 702051

@ref 20215

Last LPSN update 2026-02-09 11:18:11

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Brevibacteriaceae

Genus Brevibacterium

Species Brevibacterium casei

Full scientific name Brevibacterium casei Collins et al. 1983

BacDive ID	Other strains from **Brevibacterium casei** (42)	Type strain
1834	B. casei CMD1, DSM 20657, ATCC 35513, NCDO 2048, CCUG ... (type strain)
1831	B. casei 108, DSM 9657
1832	B. casei 393, DSM 9658
1833	B. casei 585, DSM 9659
130884	B. casei JV801, DSM 29377
100930	B. casei STI09086(IMET), 1136-001,
100931	B. casei STI09087(IMET), 1136-009,
135440	B. casei G7635, CIP 104165
136101	B. casei CIP 102489
137936	B. casei CIP 102233
138717	B. casei CIP 102347
145247	B. casei CCUG 27947
146169	B. casei CCUG 30494
146498	B. casei CCUG 31323
146542	B. casei CCUG 31402
146573	B. casei CCUG 31467
146728	B. casei CCUG 32028
146865	B. casei CCUG 32316
146936	B. casei CCUG 32476
146954	B. casei CCUG 32538
147249	B. casei CCUG 33193
147307	B. casei CCUG 33345
147907	B. casei CCUG 34468
148167	B. casei CCUG 34955
148401	B. casei CCUG 35377
148514	B. casei CCUG 35578
149205	B. casei CCUG 37266
151220	B. casei F3333, CCUG 43490, CIP 104166, ATCC 51396
151670	B. casei CCUG 44572
152474	B. casei CCUG 46895
153820	B. casei CCUG 51271
153894	B. casei CCUG 51543
154386	B. casei CCUG 53344
154481	B. casei CCUG 53784
154505	B. casei CCUG 53939
154807	B. casei CCUG 55282
158890	B. casei S 53/2 II white, DSM 110887
159987	B. casei 105895, DSM 105895
163370	B. casei JCM 2595, IFO 15228, KCTC 3086, NBRC 15228, ...
163371	B. casei JCM 2596, CCM 4101, KCTC 3087, NCDO 2050, ...
169210	B. casei TURIN101221_C9a1, DSM 113548
174368	B. casei SB303, DSM 112094

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125438		90.5
125438		91.122	positive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
8878	CORYNEBACTERIUM AGAR (DSMZ Medium 53)		Medium recipe at MediaDive	Name: CORYNEBACTERIUM AGAR (DSMZ Medium 53) Composition: Agar 15.0 g/l Casein peptone 10.0 g/l NaCl 5.0 g/l Glucose 5.0 g/l Yeast extract 5.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
8878	positive	growth	30	mesophilic
67770	positive	growth	30	mesophilic

Physiology and metabolism

Murein

@ref	Murein short key	Type
8878	A31	A1gamma m-Dpm-direct

Observation

67770

Observationquinones: MK-8(H₂), MK-7(H₂)

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body Product	#Fluids	#Milk
#Host	#Mammals	-

Isolation

@ref	Sample type
8878	raw milk
67770	Raw milk

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
8878	2	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
124043	ASM1602655v1 assembly for Brevibacterium casei FDAARGOS_937	complete	GCA_016026555	33889.19	33889	95.16

GC content

@ref	GC-content (mol%)
8878	67.0
67770	67

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Brevibacterium casei strain FDAARGOS_937 strain Not applicable
PATRIC: 33889.19

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	91.12	no
125438	anaerobic	anaerobicⓘ	no	96.37	no
125438	spore-forming	spore-formingⓘ	no	76.01	no
125438	aerobic	aerobicⓘ	yes	88.00	no
125438	thermophilic	thermophileⓘ	no	97.50	yes
125438	flagellated	motile2+ⓘ	no	90.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	Biocontrol of Occurrence Ochratoxin A in Wine: A Review.	Zjalic S, Markov K, Loncar J, Jakopovic Z, Beccaccioli M, Reverberi M.	Toxins (Basel)	10.3390/toxins16060277	2024

References

#8878	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20658
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Brevibacterium casei (DSM 20658, NCDO 2051, R6)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Murein

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_016026555

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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