Brevibacterium casei (DSM 29377, JV801)

Name: Brevibacterium casei (DSM 29377, JV801)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 130884

Type strain

Strain Designation JV801

Culture col. no. DSM 29377 JV801

NCBI tax ID(s) 33889

Special Collections DSMZ

History DSMZ <- S. Das, Natl. Inst. of Technol., Rourkela, Odisha, India; JV801

Brevibacterium casei JV801 is a bacterium that was isolated from marine sediment.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

Culture Collection Numbers

DSM 29377 JV801

@ref 20215

Last LPSN update 2026-05-29 08:37:29

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Brevibacteriaceae

Genus Brevibacterium

Species Brevibacterium casei

Full scientific name Brevibacterium casei Collins et al. 1983

BacDive ID	Other strains from **Brevibacterium casei** (40)	Type strain
1834	B. casei CMD1, DSM 20657, ATCC 35513, NCDO 2048, CCUG ... (type strain)
1831	B. casei 108, DSM 9657
1832	B. casei 393, DSM 9658
1833	B. casei 585, DSM 9659
1835	B. casei R6, DSM 20658, NCDO 2051, JCM 2597, KCTC ...
135440	B. casei G7635, CIP 104165
136101	B. casei CIP 102489
137936	B. casei CIP 102233
138717	B. casei CIP 102347
145247	B. casei CCUG 27947
146169	B. casei CCUG 30494
146498	B. casei CCUG 31323
146542	B. casei CCUG 31402
146573	B. casei CCUG 31467
146728	B. casei CCUG 32028
146865	B. casei CCUG 32316
146936	B. casei CCUG 32476
146954	B. casei CCUG 32538
147249	B. casei CCUG 33193
147307	B. casei CCUG 33345
147907	B. casei CCUG 34468
148167	B. casei CCUG 34955
148401	B. casei CCUG 35377
148514	B. casei CCUG 35578
149205	B. casei CCUG 37266
151220	B. casei F3333, CCUG 43490, CIP 104166, ATCC 51396
151670	B. casei CCUG 44572
152474	B. casei CCUG 46895
153820	B. casei CCUG 51271
153894	B. casei CCUG 51543
154386	B. casei CCUG 53344
154481	B. casei CCUG 53784
154505	B. casei CCUG 53939
154807	B. casei CCUG 55282
158890	B. casei S 53/2 II white, DSM 110887
159987	B. casei 105895, DSM 105895
163370	B. casei JCM 2595, IFO 15228, KCTC 3086, NBRC 15228, ...
163371	B. casei JCM 2596, CCM 4101, KCTC 3087, NCDO 2050, ...
169210	B. casei TURIN101221_C9a1, DSM 113548
174368	B. casei SB303, DSM 112094

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	95.618
125438		91
125438	positive	91.744

Culture and growth conditions

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
22193	marine sediment	Andhra Pradesh, Bay of Bengal	India	IND	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
22193	2	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
124043	ASM1672624v1 assembly for Brevibacterium casei FDAARGOS_1100	complete	GCA_016726245	33889.23	33889	97.53

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
22193	Brevibacterium casei strain JV801 16S ribosomal RNA gene, partial sequence	KF900215	1161		33889

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1672624v1 assembly for Brevibacterium casei FDAARGOS_1100
NCBI: GCA_016726245

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	85.71	no
125439	gram_stain	BacteriaNetⓘ	positive	95.62	no
125439	motility	BacteriaNetⓘ	no	82.56	no
125439	spore_formation	BacteriaNetⓘ	no	86.75	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Brevibacterium casei strain FDAARGOS_1100 strain Not applicable
PATRIC: 33889.23

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	91.74	no
125438	anaerobic	anaerobicⓘ	no	96.87	no
125438	spore-forming	spore-formingⓘ	no	76.51	no
125438	aerobic	aerobicⓘ	yes	86.60	no
125438	thermophilic	thermophileⓘ	no	97.50	no
125438	flagellated	motile2+ⓘ	no	91.00	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22193	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29377
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

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